RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Trav4d-3A0A075B625 110 aa11.01□□□□□ -0.65
Trim39-203ENSMUST00000113706 Defb47Q30KN1 79 aa11.01□□□□□ -0.65
Trim39-203ENSMUST00000113706 4930415O20RikQ8CDT5 131 aa11.01□□□□□ -0.65
Trim39-203ENSMUST00000113706 MobpQ9D2P8 170 aa11.01□□□□□ -0.65
Trim39-203ENSMUST00000113706 Atp5g3P56384 141 aa11.01□□□□□ -0.65
Trim39-203ENSMUST00000113706 Atp5g1Q9CR84 136 aa11.01□□□□□ -0.65
Trim39-203ENSMUST00000113706 Gm10135F6TEE5 83 aa11□□□□□ -0.65
Trim39-203ENSMUST00000113706 LbhQ9CX60 105 aa11□□□□□ -0.65
Trim39-203ENSMUST00000113706 Rpl13aP19253 203 aaKnown RBP10.99□□□□□ -0.65
Trim39-203ENSMUST00000113706 PtprqP0C5E4 2300 aa10.99□□□□□ -0.65
Trim39-203ENSMUST00000113706 Gm7137J3QMW1 236 aa10.99□□□□□ -0.65
Trim39-203ENSMUST00000113706 1700010B08RikQ9DAI7 102 aa10.99□□□□□ -0.65
Trim39-203ENSMUST00000113706 Sigmar1O55242 223 aa10.98□□□□□ -0.65
Trim39-203ENSMUST00000113706 Eif4ebp3Q80VV3 101 aa10.98□□□□□ -0.65
Trim39-203ENSMUST00000113706 Sostdc1Q9CQN4 206 aa10.98□□□□□ -0.65
Trim39-203ENSMUST00000113706 Gm28269A0A087WSG3 125 aa10.97□□□□□ -0.65
Trim39-203ENSMUST00000113706 Trbv13-2A0A140T8N6 113 aa10.97□□□□□ -0.65
Trim39-203ENSMUST00000113706 Ighv1-61P01749 117 aa10.97□□□□□ -0.65
Trim39-203ENSMUST00000113706 Trav13-4-dv7A0A075B6C2 110 aa10.97□□□□□ -0.65
Trim39-203ENSMUST00000113706 Gm11020F6ZGD5 61 aa10.97□□□□□ -0.65
Trim39-203ENSMUST00000113706 Tm2d2Q8R0I4 213 aa10.97□□□□□ -0.65
Trim39-203ENSMUST00000113706 9430069I07RikQ9CX21 111 aa10.97□□□□□ -0.65
Trim39-203ENSMUST00000113706 Odf3l2Q3TZ65 277 aa10.97□□□□□ -0.65
Trim39-203ENSMUST00000113706 Gm11444F6QMA6 170 aa10.96□□□□□ -0.66
Trim39-203ENSMUST00000113706 Zfp951A0A087WRH0 451 aa10.95□□□□□ -0.66
Trim39-203ENSMUST00000113706 Spata3Q9D9T6 193 aa10.94□□□□□ -0.66
Trim39-203ENSMUST00000113706 Trav11A0A0B4J1J9 114 aa10.94□□□□□ -0.66
Trim39-203ENSMUST00000113706 CirbpP60824 172 aaKnown RBP10.94□□□□□ -0.66
Trim39-203ENSMUST00000113706 Cks1bP61025 79 aa10.94□□□□□ -0.66
Trim39-203ENSMUST00000113706 Notch1Q01705 2531 aa10.93□□□□□ -0.66
Trim39-203ENSMUST00000113706 Igkv1-99F6XWB2 120 aa10.93□□□□□ -0.66
Trim39-203ENSMUST00000113706 Dnah10D3YYQ8 4591 aa10.93□□□□□ -0.66
Trim39-203ENSMUST00000113706 Dnah6E9Q0B6 4144 aa10.93□□□□□ -0.66
Trim39-203ENSMUST00000113706 Psors1c2Q80ZC9 134 aa10.92□□□□□ -0.66
Trim39-203ENSMUST00000113706 Gm4861Q8C5A4 106 aa10.92□□□□□ -0.66
Trim39-203ENSMUST00000113706 1700011M02RikB1AX35 88 aa10.92□□□□□ -0.66
Trim39-203ENSMUST00000113706 CenpwQ3URR0 86 aa10.92□□□□□ -0.66
Trim39-203ENSMUST00000113706 Defb50Q6TU36 73 aa10.92□□□□□ -0.66
Trim39-203ENSMUST00000113706 Zfand2aQ9JII7 171 aa10.92□□□□□ -0.66
Trim39-203ENSMUST00000113706 VwfQ8CIZ8 2813 aa10.91□□□□□ -0.66
Trim39-203ENSMUST00000113706 Gm29423A0A087WRM1 55 aa10.9□□□□□ -0.66
Trim39-203ENSMUST00000113706 6430550D23RikE9Q1X6 194 aa10.9□□□□□ -0.66
Trim39-203ENSMUST00000113706 Mzt1Q8BUR9 78 aa10.9□□□□□ -0.66
Trim39-203ENSMUST00000113706 Trav13d-4A0A0G2JFX3 110 aa10.9□□□□□ -0.67
Trim39-203ENSMUST00000113706 Trav9d-4A0A0G2JG37 103 aa10.9□□□□□ -0.67
Trim39-203ENSMUST00000113706 Ly6hQ9WUC3 139 aa10.9□□□□□ -0.67
Trim39-203ENSMUST00000113706 2310009B15RikA0A0A6YWI4 143 aa10.89□□□□□ -0.67
Trim39-203ENSMUST00000113706 Lgals4Q8K419 326 aa10.89□□□□□ -0.67
Trim39-203ENSMUST00000113706 Trav7-6A0A075B640 112 aa10.88□□□□□ -0.67
Trim39-203ENSMUST00000113706 Cox8cA6H666 72 aa10.88□□□□□ -0.67
Trim39-203ENSMUST00000113706 Ighv8-13A0A075B5Y0 101 aa10.88□□□□□ -0.67
Trim39-203ENSMUST00000113706 Gm10577Q3UDV9 132 aa10.88□□□□□ -0.67
Trim39-203ENSMUST00000113706 Ighv8-11A0A075B5X4 119 aa10.87□□□□□ -0.67
Trim39-203ENSMUST00000113706 Igkv6-13A0A0G2JGY3 119 aa10.87□□□□□ -0.67
Trim39-203ENSMUST00000113706 Prh1P05142 261 aa10.87□□□□□ -0.67
Trim39-203ENSMUST00000113706 Dnah3Q8BW94 4083 aa10.86□□□□□ -0.67
Trim39-203ENSMUST00000113706 Tmem223Q9CQE2 199 aaKnown RBP10.86□□□□□ -0.67
Trim39-203ENSMUST00000113706 Ss18l2Q9D174 77 aa10.86□□□□□ -0.67
Trim39-203ENSMUST00000113706 Cdip1Q9DB75 208 aa10.86□□□□□ -0.67
Trim39-203ENSMUST00000113706 Igkv3-9A0A140T8P4 119 aa10.86□□□□□ -0.67
Trim39-203ENSMUST00000113706 Q9DAQ5 155 aa10.86□□□□□ -0.67
Trim39-203ENSMUST00000113706 Dnah14A0A140LIJ4 4489 aa10.86□□□□□ -0.67
Trim39-203ENSMUST00000113706 P01755 137 aa10.85□□□□□ -0.67
Trim39-203ENSMUST00000113706 Cryba4Q9JJV0 196 aa10.85□□□□□ -0.67
Trim39-203ENSMUST00000113706 Trav3-1Q5R1I8 114 aa10.85□□□□□ -0.67
Trim39-203ENSMUST00000113706 Lst1O08843 95 aa10.84□□□□□ -0.67
Trim39-203ENSMUST00000113706 Sprr1bQ62267 153 aa10.84□□□□□ -0.67
Trim39-203ENSMUST00000113706 4930544G11RikQ9CR99 193 aa10.83□□□□□ -0.68
Trim39-203ENSMUST00000113706 Gm10647E9Q8X0 124 aa10.83□□□□□ -0.68
Trim39-203ENSMUST00000113706 Cops9Q3U898 57 aa10.82□□□□□ -0.68
Trim39-203ENSMUST00000113706 Anapc13Q8R034 74 aa10.81□□□□□ -0.68
Trim39-203ENSMUST00000113706 Phpt1Q9DAK9 124 aa10.81□□□□□ -0.68
Trim39-203ENSMUST00000113706 B230359F08RikA0A0B4J1K3 109 aa10.8□□□□□ -0.68
Trim39-203ENSMUST00000113706 Bles03Q8VD62 251 aa10.8□□□□□ -0.68
Trim39-203ENSMUST00000113706 Igsf10Q3V1M1 2594 aa10.8□□□□□ -0.68
Trim39-203ENSMUST00000113706 MalO09198 153 aa10.8□□□□□ -0.68
Trim39-203ENSMUST00000113706 Pfn2Q9JJV2 140 aa10.8□□□□□ -0.68
Trim39-203ENSMUST00000113706 Igkv8-34A0A0G2JDU0 121 aa10.79□□□□□ -0.68
Trim39-203ENSMUST00000113706 Trav9n-4A0A075B631 113 aa10.79□□□□□ -0.68
Trim39-203ENSMUST00000113706 Gm10549Q3URY4 149 aa10.79□□□□□ -0.68
Trim39-203ENSMUST00000113706 SelenowP63300 88 aa10.79□□□□□ -0.68
Trim39-203ENSMUST00000113706 Lage3Q9CR70 148 aa10.79□□□□□ -0.68
Trim39-203ENSMUST00000113706 Snhg11Q4G0K9 87 aa10.78□□□□□ -0.68
Trim39-203ENSMUST00000113706 Cox6cQ9CPQ1 76 aa10.78□□□□□ -0.68
Trim39-203ENSMUST00000113706 SpinklQ8CEK3 90 aa10.78□□□□□ -0.68
Trim39-203ENSMUST00000113706 Krtap11-1E9Q2E9 183 aa10.77□□□□□ -0.69
Trim39-203ENSMUST00000113706 Ighv2-9-1A0A075B697 116 aa10.77□□□□□ -0.69
Trim39-203ENSMUST00000113706 Igkv1-117A0A140T8M0 119 aa10.76□□□□□ -0.69
Trim39-203ENSMUST00000113706 PemtQ61907 199 aa10.76□□□□□ -0.69
Trim39-203ENSMUST00000113706 Prss58Q8BW11 241 aa10.76□□□□□ -0.69
Trim39-203ENSMUST00000113706 Gm16181B0V2H2 73 aa10.75□□□□□ -0.69
Trim39-203ENSMUST00000113706 Ube2wQ8VDW4 151 aa10.75□□□□□ -0.69
Trim39-203ENSMUST00000113706 Igkv3-1A0A075B5P1 119 aa10.75□□□□□ -0.69
Trim39-203ENSMUST00000113706 Prr13Q9CQJ5 137 aa10.75□□□□□ -0.69
Trim39-203ENSMUST00000113706 EnhoQ8K1D8 76 aa10.74□□□□□ -0.69
Trim39-203ENSMUST00000113706 Ndufa12Q7TMF3 145 aaKnown RBP10.74□□□□□ -0.69
Trim39-203ENSMUST00000113706 TnxbO35452 4006 aa10.74□□□□□ -0.69
Trim39-203ENSMUST00000113706 AplnQ9R0R4 77 aa10.73□□□□□ -0.69
Trim39-203ENSMUST00000113706 Sslp1Q3UN54 99 aa10.73□□□□□ -0.69
Trim39-203ENSMUST00000113706 Rpl28P41105 137 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 44.9 ms