RNA–Protein interactions for RNA: ENSMUST00000106653.3

Usp47-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

APPRIS P3 TSL 5 BASIC

Gene Usp47, Length 5,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47-201ENSMUST00000106653 Arid1bE9Q4N7 2244 aa12.04□□□□□ -0.48
Usp47-201ENSMUST00000106653 Rnf152Q8BG47 203 aa12.03□□□□□ -0.48
Usp47-201ENSMUST00000106653 Q8K1L6 76 aa12.02□□□□□ -0.48
Usp47-201ENSMUST00000106653 4930535I16RikQ9CUI2 172 aa12.02□□□□□ -0.49
Usp47-201ENSMUST00000106653 Myo9aQ8C170 2542 aa12.02□□□□□ -0.49
Usp47-201ENSMUST00000106653 Wdr38Q9D994 303 aa12.01□□□□□ -0.49
Usp47-201ENSMUST00000106653 Tcl1b5P56845 121 aa12.01□□□□□ -0.49
Usp47-201ENSMUST00000106653 Igkv1-117A0A140T8M0 119 aa12.01□□□□□ -0.49
Usp47-201ENSMUST00000106653 Sptbn4E9PX29 2561 aa12.01□□□□□ -0.49
Usp47-201ENSMUST00000106653 Defb13Q8R2I4 64 aa12□□□□□ -0.49
Usp47-201ENSMUST00000106653 P06320 134 aa12□□□□□ -0.49
Usp47-201ENSMUST00000106653 ScxQ64124 207 aa12□□□□□ -0.49
Usp47-201ENSMUST00000106653 Ighv10-3A0A075B5T6 119 aa12□□□□□ -0.49
Usp47-201ENSMUST00000106653 Gm11011D3Z3L9 86 aa12□□□□□ -0.49
Usp47-201ENSMUST00000106653 Vpreb2P13373 142 aa11.99□□□□□ -0.49
Usp47-201ENSMUST00000106653 Lrrk2Q5S006 2527 aa11.98□□□□□ -0.49
Usp47-201ENSMUST00000106653 Znf580Q9DB38 172 aa11.98□□□□□ -0.49
Usp47-201ENSMUST00000106653 Gm10300Q8C8P7 189 aa11.97□□□□□ -0.49
Usp47-201ENSMUST00000106653 Ighv8-13A0A075B5Y0 101 aa11.97□□□□□ -0.49
Usp47-201ENSMUST00000106653 4930556J24RikQ9D4U7 146 aa11.97□□□□□ -0.49
Usp47-201ENSMUST00000106653 BC067074F6RXI4 2391 aa11.97□□□□□ -0.49
Usp47-201ENSMUST00000106653 Trav14-1A0A0G2JF94 121 aa11.95□□□□□ -0.5
Usp47-201ENSMUST00000106653 Srsf12Q8C8K3 266 aa11.95□□□□□ -0.5
Usp47-201ENSMUST00000106653 Smim20D3Z7Q2 69 aa11.95□□□□□ -0.5
Usp47-201ENSMUST00000106653 Igkv1-110A0A0B4J1I0 119 aa11.95□□□□□ -0.5
Usp47-201ENSMUST00000106653 Defb40Q70KL2 73 aa11.94□□□□□ -0.5
Usp47-201ENSMUST00000106653 Rpl28P41105 137 aaKnown RBP11.94□□□□□ -0.5
Usp47-201ENSMUST00000106653 Gm20604F8WIA3 75 aa11.93□□□□□ -0.5
Usp47-201ENSMUST00000106653 SptssbQ925E8 76 aa11.93□□□□□ -0.5
Usp47-201ENSMUST00000106653 Crip3Q6Q6R3 243 aa11.93□□□□□ -0.5
Usp47-201ENSMUST00000106653 Chd8Q09XV5 2582 aaKnown RBP11.93□□□□□ -0.5
Usp47-201ENSMUST00000106653 Ighv8-11A0A075B5X4 119 aa11.92□□□□□ -0.5
Usp47-201ENSMUST00000106653 Wfdc13Q5DQQ6 81 aa11.92□□□□□ -0.5
Usp47-201ENSMUST00000106653 Znf706Q9D115 76 aaKnown RBP11.92□□□□□ -0.5
Usp47-201ENSMUST00000106653 BaalcQ8VHV1 145 aa11.91□□□□□ -0.5
Usp47-201ENSMUST00000106653 4930432M17RikQ3V0W9 174 aa11.91□□□□□ -0.5
Usp47-201ENSMUST00000106653 Pkd1l2Q7TN88 2461 aa11.9□□□□□ -0.5
Usp47-201ENSMUST00000106653 Ankhd1E9PUR0 2548 aaKnown RBP11.89□□□□□ -0.51
Usp47-201ENSMUST00000106653 Abca2P41234 2434 aa11.89□□□□□ -0.51
Usp47-201ENSMUST00000106653 BC025920Q3US60 128 aa11.88□□□□□ -0.51
Usp47-201ENSMUST00000106653 Odf3l2Q3TZ65 277 aa11.88□□□□□ -0.51
Usp47-201ENSMUST00000106653 Gm17509Q9CZ61 145 aa11.87□□□□□ -0.51
Usp47-201ENSMUST00000106653 Gm5142Q8C5X9 133 aa11.87□□□□□ -0.51
Usp47-201ENSMUST00000106653 TroQ6DIC6 2087 aa11.87□□□□□ -0.51
Usp47-201ENSMUST00000106653 SetxA2AKX3 2646 aa11.86□□□□□ -0.51
Usp47-201ENSMUST00000106653 Ighv2-9A0A075B5Q5 116 aa11.85□□□□□ -0.51
Usp47-201ENSMUST00000106653 Ly6g6cQ9Z1Q4 126 aa11.85□□□□□ -0.51
Usp47-201ENSMUST00000106653 CdsnQ7TPC1 561 aa11.85□□□□□ -0.51
Usp47-201ENSMUST00000106653 Gm16485Q8C4B7 115 aa11.85□□□□□ -0.51
Usp47-201ENSMUST00000106653 4930524J08RikQ9CUJ5 163 aa11.85□□□□□ -0.51
Usp47-201ENSMUST00000106653 Arhgap32Q811P8 2089 aa11.85□□□□□ -0.51
Usp47-201ENSMUST00000106653 TeppQ6IMH0 216 aa11.85□□□□□ -0.51
Usp47-201ENSMUST00000106653 Psmb11Q8BG41 302 aa11.85□□□□□ -0.51
Usp47-201ENSMUST00000106653 Atox1O08997 68 aaKnown RBP11.83□□□□□ -0.52
Usp47-201ENSMUST00000106653 Igkv8-30A0A140T8M3 121 aa11.82□□□□□ -0.52
Usp47-201ENSMUST00000106653 Gm28539A0A087WSL9 92 aa11.82□□□□□ -0.52
Usp47-201ENSMUST00000106653 Gm5153P01627 120 aa11.82□□□□□ -0.52
Usp47-201ENSMUST00000106653 Ifitm6A0A1B0GS75 124 aa11.81□□□□□ -0.52
Usp47-201ENSMUST00000106653 NpwA0A1L1STR8 176 aa11.81□□□□□ -0.52
Usp47-201ENSMUST00000106653 Serp2Q6TAW2 65 aa11.81□□□□□ -0.52
Usp47-201ENSMUST00000106653 Golgb1E9PVZ8 3238 aa11.81□□□□□ -0.52
Usp47-201ENSMUST00000106653 Zfand2aQ9JII7 171 aa11.8□□□□□ -0.52
Usp47-201ENSMUST00000106653 CenpwQ3URR0 86 aa11.8□□□□□ -0.52
Usp47-201ENSMUST00000106653 Sec61gP60060 68 aa11.79□□□□□ -0.52
Usp47-201ENSMUST00000106653 2310009B15RikA0A0A6YWI4 143 aa11.79□□□□□ -0.52
Usp47-201ENSMUST00000106653 Mrpl52Q9D0Y8 121 aa11.78□□□□□ -0.52
Usp47-201ENSMUST00000106653 Sprr2jO70561 109 aa11.78□□□□□ -0.52
Usp47-201ENSMUST00000106653 A0A286YE49 62 aa11.77□□□□□ -0.53
Usp47-201ENSMUST00000106653 Hivep2Q3UHF7 2430 aa11.77□□□□□ -0.53
Usp47-201ENSMUST00000106653 Igkv3-12A0A140T8P0 119 aa11.77□□□□□ -0.53
Usp47-201ENSMUST00000106653 Gm10549Q3URY4 149 aa11.77□□□□□ -0.53
Usp47-201ENSMUST00000106653 Ptpn13Q64512 2453 aa11.77□□□□□ -0.53
Usp47-201ENSMUST00000106653 C2cd3Q52KB6 2323 aa11.76□□□□□ -0.53
Usp47-201ENSMUST00000106653 Adm2Q7TNK8 150 aa11.76□□□□□ -0.53
Usp47-201ENSMUST00000106653 Gm10845Q3UNY9 185 aa11.76□□□□□ -0.53
Usp47-201ENSMUST00000106653 1600014C23RikQ9DAX4 101 aa11.76□□□□□ -0.53
Usp47-201ENSMUST00000106653 Ttc28Q80XJ3 2450 aa11.76□□□□□ -0.53
Usp47-201ENSMUST00000106653 Gm43218A0A0G2JGT0 114 aa11.75□□□□□ -0.53
Usp47-201ENSMUST00000106653 Gm10135F6TEE5 83 aa11.74□□□□□ -0.53
Usp47-201ENSMUST00000106653 A830031A19RikQ8BNT5 113 aa11.74□□□□□ -0.53
Usp47-201ENSMUST00000106653 3110070M22RikQ9DAQ7 118 aa11.74□□□□□ -0.53
Usp47-201ENSMUST00000106653 Spink13Q3UTS8 97 aa11.73□□□□□ -0.53
Usp47-201ENSMUST00000106653 H2al1bA0A087WP11 105 aa11.7□□□□□ -0.54
Usp47-201ENSMUST00000106653 Krtap24-1G3X9A2 248 aa11.7□□□□□ -0.54
Usp47-201ENSMUST00000106653 Ntn5Q3UQ22 452 aa11.7□□□□□ -0.54
Usp47-201ENSMUST00000106653 Crip2Q9DCT8 208 aaKnown RBP11.69□□□□□ -0.54
Usp47-201ENSMUST00000106653 Vpreb1P13372 142 aa11.68□□□□□ -0.54
Usp47-201ENSMUST00000106653 Smr3aQ61900 147 aa11.67□□□□□ -0.54
Usp47-201ENSMUST00000106653 Usp9xP70398 2559 aaKnown RBP11.66□□□□□ -0.54
Usp47-201ENSMUST00000106653 Nav3Q80TN7 2359 aa11.66□□□□□ -0.54
Usp47-201ENSMUST00000106653 H2al1aQ5M8Q2 105 aa11.66□□□□□ -0.54
Usp47-201ENSMUST00000106653 H2al1eQ810S6 105 aa11.66□□□□□ -0.54
Usp47-201ENSMUST00000106653 CrygaP04345 174 aa11.66□□□□□ -0.54
Usp47-201ENSMUST00000106653 Gm28374F6SG70 93 aa11.65□□□□□ -0.54
Usp47-201ENSMUST00000106653 Wfdc3Q14AE4 130 aa11.65□□□□□ -0.54
Usp47-201ENSMUST00000106653 C130032M10RikQ8C888 123 aa11.65□□□□□ -0.54
Usp47-201ENSMUST00000106653 Igkv8-28A0A0G2JE47 121 aa11.64□□□□□ -0.55
Usp47-201ENSMUST00000106653 A730009L09RikA0A1B0GS82 72 aa11.64□□□□□ -0.55
Usp47-201ENSMUST00000106653 Gm16181B0V2H2 73 aa11.64□□□□□ -0.55
Usp47-201ENSMUST00000106653 Q9DAA7 145 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms