RNA–Protein interactions for RNA: ENSMUST00000102774.10

Sqstm1-202, Transcript of Sequestosome-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sqstm1, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-202ENSMUST00000102774 Ighv13-2A0A0A6YWN3 119 aa12.9□□□□□ -0.34
Sqstm1-202ENSMUST00000102774 Gm11027G8JL69 66 aa12.9□□□□□ -0.34
Sqstm1-202ENSMUST00000102774 Rmi2Q3UPE3 149 aa12.9□□□□□ -0.34
Sqstm1-202ENSMUST00000102774 Plscr4P58196 326 aa12.89□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Triap1Q9D8Z2 76 aa12.89□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Erg28Q9ERY9 140 aa12.89□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Vamp8O70404 101 aa12.89□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Wfdc21Q8BTE6 63 aa12.89□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Gm17509Q9CZ61 145 aa12.89□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Gm11213A0A1B0GR83 88 aa12.88□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 PrkdcP97313 4128 aa12.88□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 BC107364E9Q5A2 140 aa12.88□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 SpinklQ8CEK3 90 aa12.88□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 4930442H23RikQ9D5G7 103 aa12.88□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Tal2Q62282 108 aa12.87□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Iglc1A0A0G2JE99 106 aa12.86□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 A0A286YCQ8 80 aa12.86□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Defb45Q3V490 66 aa12.86□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Scgb1b3J3QJY4 93 aa12.86□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Gm10251J3QPM5 127 aa12.86□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Bsph2Q0Q236 131 aa12.86□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Prss58Q8BW11 241 aa12.86□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Ighv1-61P01749 117 aa12.85□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Isg15Q64339 161 aaKnown RBP12.85□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 4930432M17RikQ3V0W9 174 aa12.84□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 2310061N02RikQ9D6S9 174 aa12.84□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Trav4-3A0A0B4J1K1 110 aa12.84□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Defa15P50713 93 aa12.84□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Defa22Q8C1N8 93 aa12.84□□□□□ -0.35
Sqstm1-202ENSMUST00000102774 Tmem238A9JSM3 176 aa12.83□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Smim13E9Q942 88 aa12.82□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 P01896 185 aa12.82□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Defb50Q6TU36 73 aa12.81□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Fras1Q80T14 4010 aa12.81□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Gm26727M0QWT1 121 aa12.81□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Gm16485Q8C4B7 115 aa12.81□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 C920008G01RikA0A0B4J1N1 112 aa12.8□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Vmn1r197Q8R265 298 aa12.8□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Q9DAQ5 155 aa12.8□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Gm9507D3Z5T3 223 aa12.79□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Morn5Q9DAI9 170 aa12.79□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Srsf9Q9D0B0 222 aaKnown RBP12.79□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 P01755 137 aa12.78□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Tmem86bQ497J1 226 aa12.78□□□□□ -0.36
Sqstm1-202ENSMUST00000102774 Trav9d-4A0A0G2JG37 103 aa12.77□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Gm6812B1AXU1 112 aa12.77□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Cks1bP61025 79 aa12.77□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 G0s2Q61585 103 aa12.76□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Q9DAA3 117 aa12.76□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Ighv1-56A0A0A6YXG2 117 aa12.76□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Defa9P50707 93 aa12.76□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 4930544G11RikQ9CR99 193 aa12.75□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 S100a8P27005 89 aa12.74□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 1700010B08RikQ9DAI7 102 aa12.74□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Igkv8-24A0A140T8P5 121 aa12.74□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Gm5617Q91VN2 117 aa12.74□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Gm9918Q8BUR5 174 aa12.73□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 B230359F08RikA0A0B4J1K3 109 aa12.72□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Gemin7Q9CWY4 129 aa12.72□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Tax1bp3Q9DBG9 124 aa12.72□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Timm17bQ9Z0V7 172 aa12.72□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Gm28051J3QMA2 81 aa12.72□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Ndufa12Q7TMF3 145 aaKnown RBP12.71□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 PlecQ9QXS1 4691 aaKnown RBP12.71□□□□□ -0.37
Sqstm1-202ENSMUST00000102774 Rpl24Q8BP67 157 aaKnown RBP12.71□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Trav4d-3A0A075B625 110 aa12.7□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 1700011M02RikB1AX35 88 aa12.7□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Mzt1Q8BUR9 78 aa12.7□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Ighv2-9A0A075B5Q5 116 aa12.69□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Gm11020F6ZGD5 61 aa12.69□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Tspan13Q9D8C2 204 aa12.69□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 C530025M09RikF6RGA8 229 aa12.67□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 P01843 105 aa12.67□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 4930556J24RikQ9D4U7 146 aa12.67□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Glrp1E9Q9S8 174 aa12.67□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Cox7b2Q9D2H1 82 aa12.67□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Sostdc1Q9CQN4 206 aa12.66□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Gm867A0A1W2P7T4 151 aa12.65□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 Pfn2Q9JJV2 140 aa12.65□□□□□ -0.38
Sqstm1-202ENSMUST00000102774 BtcQ05928 177 aa12.64□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Ly6g6cQ9Z1Q4 126 aa12.64□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Gm6793B2RXM2 351 aa12.64□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Cops9Q3U898 57 aa12.64□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 4930415O20RikQ8CDT5 131 aa12.64□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Igkv4-92A0A0B4J1I2 117 aa12.62□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Gm10577Q3UDV9 132 aa12.62□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Dppa2Q9CWH0 301 aa12.62□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Hrct1Q9D6B9 109 aa12.62□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 A730009L09RikA0A1B0GS82 72 aa12.62□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Defa16P50714 93 aa12.62□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Ube2wQ8VDW4 151 aa12.61□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Cox8cA6H666 72 aa12.6□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Defa1P11477 93 aa12.6□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Tcl1b5P56845 121 aa12.59□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Sprr4Q8CGN8 76 aa12.59□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Tac4Q99N14 128 aa12.59□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 2310009B15RikA0A0A6YWI4 143 aa12.59□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 CckP09240 115 aa12.59□□□□□ -0.39
Sqstm1-202ENSMUST00000102774 Igkv8-16A0A0G2JDG9 121 aa12.58□□□□□ -0.4
Sqstm1-202ENSMUST00000102774 9430015G10RikA2ASP7 199 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 72.2 ms