Protein–RNA interactions for Protein: J3QJY4

Scgb1b3, ABPA3, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scgb1b3J3QJY4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Scgb1b3J3QJY4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Scgb1b3J3QJY4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Scgb1b3J3QJY4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Scgb1b3J3QJY4 Psd-208ENSMUST00000224556 2034 ntBASIC23.66■■□□□ 1.38
Scgb1b3J3QJY4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Scgb1b3J3QJY4 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.96■■□□□ 1.27
Scgb1b3J3QJY4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Scgb1b3J3QJY4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Scgb1b3J3QJY4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Scgb1b3J3QJY4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Scgb1b3J3QJY4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Scgb1b3J3QJY4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Scgb1b3J3QJY4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Scgb1b3J3QJY4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Scgb1b3J3QJY4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Scgb1b3J3QJY4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Scgb1b3J3QJY4 Gm25239-201ENSMUST00000174915 86 ntBASIC22.22■■□□□ 1.15
Scgb1b3J3QJY4 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.19■■□□□ 1.14
Scgb1b3J3QJY4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Scgb1b3J3QJY4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Scgb1b3J3QJY4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Scgb1b3J3QJY4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Scgb1b3J3QJY4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scgb1b3J3QJY4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Scgb1b3J3QJY4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Scgb1b3J3QJY4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Scgb1b3J3QJY4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scgb1b3J3QJY4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scgb1b3J3QJY4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Scgb1b3J3QJY4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scgb1b3J3QJY4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Scgb1b3J3QJY4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Scgb1b3J3QJY4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.63■■□□□ 1.05
Scgb1b3J3QJY4 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scgb1b3J3QJY4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scgb1b3J3QJY4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Scgb1b3J3QJY4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Scgb1b3J3QJY4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Scgb1b3J3QJY4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Scgb1b3J3QJY4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Scgb1b3J3QJY4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.21■□□□□ 0.99
Scgb1b3J3QJY4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Scgb1b3J3QJY4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.15■□□□□ 0.98
Scgb1b3J3QJY4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Scgb1b3J3QJY4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Scgb1b3J3QJY4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.06■□□□□ 0.96
Scgb1b3J3QJY4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Scgb1b3J3QJY4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scgb1b3J3QJY4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scgb1b3J3QJY4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scgb1b3J3QJY4 Zxda-201ENSMUST00000117281 2621 ntBASIC20.98■□□□□ 0.95
Scgb1b3J3QJY4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Scgb1b3J3QJY4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scgb1b3J3QJY4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Scgb1b3J3QJY4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Scgb1b3J3QJY4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scgb1b3J3QJY4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.82■□□□□ 0.92
Scgb1b3J3QJY4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scgb1b3J3QJY4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scgb1b3J3QJY4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.77■□□□□ 0.92
Scgb1b3J3QJY4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scgb1b3J3QJY4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Scgb1b3J3QJY4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Scgb1b3J3QJY4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Scgb1b3J3QJY4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Scgb1b3J3QJY4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Scgb1b3J3QJY4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Scgb1b3J3QJY4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scgb1b3J3QJY4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scgb1b3J3QJY4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Scgb1b3J3QJY4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Scgb1b3J3QJY4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scgb1b3J3QJY4 Gm10524-201ENSMUST00000181931 1893 ntBASIC20.42■□□□□ 0.86
Scgb1b3J3QJY4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scgb1b3J3QJY4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scgb1b3J3QJY4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scgb1b3J3QJY4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scgb1b3J3QJY4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scgb1b3J3QJY4 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scgb1b3J3QJY4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scgb1b3J3QJY4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scgb1b3J3QJY4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Scgb1b3J3QJY4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Scgb1b3J3QJY4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Scgb1b3J3QJY4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Scgb1b3J3QJY4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Scgb1b3J3QJY4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Scgb1b3J3QJY4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.24■□□□□ 0.83
Scgb1b3J3QJY4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Scgb1b3J3QJY4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scgb1b3J3QJY4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Scgb1b3J3QJY4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
Scgb1b3J3QJY4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scgb1b3J3QJY4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Scgb1b3J3QJY4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Scgb1b3J3QJY4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Scgb1b3J3QJY4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Scgb1b3J3QJY4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Scgb1b3J3QJY4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms