RNA–Protein interactions for RNA: ENSMUST00000092569.12

Ccdc43-201, Transcript of Coiled-coil domain-containing protein 43, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc43, Length 2,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43-201ENSMUST00000092569 Ighv1-59A0A0A6YXE0 117 aa10.97□□□□□ -0.65
Ccdc43-201ENSMUST00000092569 Scgb1b24B1B0N6 92 aa10.97□□□□□ -0.65
Ccdc43-201ENSMUST00000092569 Ly6hQ9WUC3 139 aa10.96□□□□□ -0.65
Ccdc43-201ENSMUST00000092569 4930544G11RikQ9CR99 193 aa10.96□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 PrcdQ00LT2 53 aa10.95□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Vmo1Q5SXG7 201 aa10.95□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Defb50Q6TU36 73 aa10.95□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Lgals4Q8K419 326 aa10.95□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Tm2d2Q8R0I4 213 aa10.95□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Atp5g1Q9CR84 136 aa10.95□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Zfand2aQ9JII7 171 aa10.95□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Odf3l2Q3TZ65 277 aa10.94□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Q9DAQ5 155 aa10.94□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Srrm2Q8BTI8 2703 aaKnown RBP10.93□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Gm36176A0A1W2P8D5 158 aa10.93□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 P01755 137 aa10.92□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Zfp951A0A087WRH0 451 aa10.92□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Cdip1Q9DB75 208 aa10.92□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Cox8cA6H666 72 aa10.91□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Prh1P05142 261 aa10.91□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Trav3-1Q5R1I8 114 aa10.91□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Bles03Q8VD62 251 aa10.91□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Lst1O08843 95 aa10.91□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 B230359F08RikA0A0B4J1K3 109 aa10.9□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Igkv1-99F6XWB2 120 aa10.9□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Atp5g3P56384 141 aa10.9□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Gm10577Q3UDV9 132 aa10.9□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Trbv13-2A0A140T8N6 113 aa10.9□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Higd2aQ9CQJ1 106 aa10.9□□□□□ -0.66
Ccdc43-201ENSMUST00000092569 Col6a5A6H584 2640 aa10.9□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Dad1P61804 113 aa10.89□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Phpt1Q9DAK9 124 aa10.89□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Trav7-6A0A075B640 112 aa10.89□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Igkv6-13A0A0G2JGY3 119 aa10.89□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Gm10647E9Q8X0 124 aa10.89□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Pfn2Q9JJV2 140 aa10.89□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Cmc4Q61908 68 aa10.88□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Ss18l2Q9D174 77 aa10.88□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Gm7137J3QMW1 236 aa10.88□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Cops9Q3U898 57 aa10.88□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 MalO09198 153 aa10.87□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 SelenowP63300 88 aa10.87□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Foxc1Q61572 553 aa10.87□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Notch2O35516 2470 aa10.87□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 ApcQ61315 2845 aa10.87□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Znf740Q6NZQ6 180 aa10.87□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 SpinklQ8CEK3 90 aa10.87□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Klk9Q32M27 251 aa10.86□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Cox6cQ9CPQ1 76 aa10.86□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 PolqQ8CGS6 2544 aa10.86□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Tmem223Q9CQE2 199 aaKnown RBP10.85□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Sprr1bQ62267 153 aa10.84□□□□□ -0.67
Ccdc43-201ENSMUST00000092569 Wfdc17Q5SSJ1 76 aa10.83□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Psors1c2Q80ZC9 134 aa10.83□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Lage3Q9CR70 148 aa10.83□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Prss58Q8BW11 241 aa10.82□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Igkv1-117A0A140T8M0 119 aa10.82□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 PemtQ61907 199 aa10.82□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Ube2wQ8VDW4 151 aa10.82□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Gm10549Q3URY4 149 aa10.81□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Klk11Q9QYN3 276 aa10.81□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Trav9n-4A0A075B631 113 aa10.81□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Igkv3-9A0A140T8P4 119 aa10.81□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Gm10767Q3TQP0 103 aa10.81□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Ndufa12Q7TMF3 145 aaKnown RBP10.81□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Spry2Q9QXV8 315 aa10.79□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Trav13-1A0A075B644 110 aa10.79□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Ighv2-9-1A0A075B697 116 aa10.79□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 VwfQ8CIZ8 2813 aa10.78□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Cryba4Q9JJV0 196 aa10.77□□□□□ -0.68
Ccdc43-201ENSMUST00000092569 Pglyrp4Q0VB07 374 aa10.76□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Krtap11-1E9Q2E9 183 aa10.76□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Rpl28P41105 137 aaKnown RBP10.76□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 TeppQ6IMH0 216 aa10.75□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Defb29Q8BGW9 78 aa10.75□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 C530025M09RikF6RGA8 229 aa10.75□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Cks1bP61025 79 aa10.75□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Dnah10D3YYQ8 4591 aa10.74□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Notch1Q01705 2531 aa10.74□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 2010109I03RikQ9CQ11 111 aa10.74□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Ighv8-11A0A075B5X4 119 aa10.73□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Ighv8-13A0A075B5Y0 101 aa10.73□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Phxr5P08399 672 aa10.73□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 E130114P18RikF6S0S7 154 aa10.73□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Igkv1-35A0A0G2JDE5 120 aa10.72□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Wdr38Q9D994 303 aa10.72□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 PtprqP0C5E4 2300 aa10.72□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Kmt2aP55200 3966 aa10.72□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Trav13-2A0A075B649 110 aa10.72□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 1700020N15RikL7MTX3 112 aa10.72□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Defb10Q8R2I8 73 aa10.72□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 Tmem86bQ497J1 226 aa10.71□□□□□ -0.69
Ccdc43-201ENSMUST00000092569 MifP34884 115 aaKnown RBP10.69□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Mzt1Q8BUR9 78 aa10.69□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Xlr5cQ9JJR2 179 aa10.69□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Trav13n-2A0A0G2JF93 110 aa10.69□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 EnhoQ8K1D8 76 aa10.69□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 4930524J08RikQ9CUJ5 163 aa10.69□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Spata45Q9CVW4 97 aa10.69□□□□□ -0.7
Ccdc43-201ENSMUST00000092569 Dnah6E9Q0B6 4144 aa10.68□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 126.8 ms