RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Mrpl55Q9CZ83 127 aa11.43□□□□□ -0.58
Ret-202ENSMUST00000088790 FlnbQ80X90 2602 aaKnown RBP11.43□□□□□ -0.58
Ret-202ENSMUST00000088790 A0A286YCN5 57 aa11.43□□□□□ -0.58
Ret-202ENSMUST00000088790 Chd7A2AJK6 2986 aaKnown RBP11.42□□□□□ -0.58
Ret-202ENSMUST00000088790 Gm12353A2AGJ4 60 aa11.42□□□□□ -0.58
Ret-202ENSMUST00000088790 Wfdc12Q9JHY3 85 aa11.42□□□□□ -0.58
Ret-202ENSMUST00000088790 Hcfc1Q61191 2045 aaKnown RBP11.41□□□□□ -0.58
Ret-202ENSMUST00000088790 Gm3618D3Z4P5 127 aa11.41□□□□□ -0.58
Ret-202ENSMUST00000088790 Gm10401E9Q3K6 71 aa11.41□□□□□ -0.58
Ret-202ENSMUST00000088790 BC025920Q3US60 128 aa11.41□□□□□ -0.58
Ret-202ENSMUST00000088790 Trbv13-2A0A140T8N6 113 aa11.4□□□□□ -0.58
Ret-202ENSMUST00000088790 Ighv10-1A0A0B4J1J6 119 aa11.4□□□□□ -0.58
Ret-202ENSMUST00000088790 HttP42859 3119 aa11.39□□□□□ -0.59
Ret-202ENSMUST00000088790 5730596B20RikQ8BQ08 205 aa11.39□□□□□ -0.59
Ret-202ENSMUST00000088790 Ube2aQ9Z255 152 aa11.39□□□□□ -0.59
Ret-202ENSMUST00000088790 Srsf12Q8C8K3 266 aa11.39□□□□□ -0.59
Ret-202ENSMUST00000088790 Shisa2Q8QZV2 295 aa11.39□□□□□ -0.59
Ret-202ENSMUST00000088790 Fam19a1Q7TPG8 133 aa11.39□□□□□ -0.59
Ret-202ENSMUST00000088790 BikO70337 150 aa11.38□□□□□ -0.59
Ret-202ENSMUST00000088790 CrygeQ03740 174 aa11.38□□□□□ -0.59
Ret-202ENSMUST00000088790 Gm10300Q8C8P7 189 aa11.38□□□□□ -0.59
Ret-202ENSMUST00000088790 Wfdc15aQ8BH89 80 aa11.38□□□□□ -0.59
Ret-202ENSMUST00000088790 Smim20D3Z7Q2 69 aa11.37□□□□□ -0.59
Ret-202ENSMUST00000088790 Spink4O35679 86 aa11.37□□□□□ -0.59
Ret-202ENSMUST00000088790 Bri3P28662 125 aa11.37□□□□□ -0.59
Ret-202ENSMUST00000088790 Nbeal1E9PYP2 2688 aa11.37□□□□□ -0.59
Ret-202ENSMUST00000088790 Ighv2-9-1A0A075B697 116 aa11.36□□□□□ -0.59
Ret-202ENSMUST00000088790 Gm12057A0A087WR21 115 aa11.36□□□□□ -0.59
Ret-202ENSMUST00000088790 D730001G18RikA0A087WQU7 115 aa11.35□□□□□ -0.59
Ret-202ENSMUST00000088790 4930432M17RikQ3V0W9 174 aa11.35□□□□□ -0.59
Ret-202ENSMUST00000088790 Col12a1Q60847 3120 aa11.35□□□□□ -0.59
Ret-202ENSMUST00000088790 Igkv3-5A0A140T8M6 119 aa11.35□□□□□ -0.59
Ret-202ENSMUST00000088790 Cox8cA6H666 72 aa11.35□□□□□ -0.59
Ret-202ENSMUST00000088790 Gm17521F6QAC8 156 aa11.35□□□□□ -0.59
Ret-202ENSMUST00000088790 Spink13Q3UTS8 97 aa11.33□□□□□ -0.6
Ret-202ENSMUST00000088790 Plac8l1Q08EJ0 177 aa11.33□□□□□ -0.6
Ret-202ENSMUST00000088790 Igkv3-10A0A0G2JGN0 119 aa11.33□□□□□ -0.6
Ret-202ENSMUST00000088790 4930535I16RikQ9CUI2 172 aa11.32□□□□□ -0.6
Ret-202ENSMUST00000088790 3110070M22RikQ9DAQ7 118 aa11.32□□□□□ -0.6
Ret-202ENSMUST00000088790 Brk1Q91VR8 75 aa11.32□□□□□ -0.6
Ret-202ENSMUST00000088790 Defb12Q8K4N3 78 aa11.32□□□□□ -0.6
Ret-202ENSMUST00000088790 Tmem258P61166 79 aa11.31□□□□□ -0.6
Ret-202ENSMUST00000088790 Smr3aQ61900 147 aa11.31□□□□□ -0.6
Ret-202ENSMUST00000088790 EnhoQ8K1D8 76 aa11.31□□□□□ -0.6
Ret-202ENSMUST00000088790 Gpha2Q925Q5 128 aa11.31□□□□□ -0.6
Ret-202ENSMUST00000088790 Itpr1P11881 2749 aa11.3□□□□□ -0.6
Ret-202ENSMUST00000088790 Obox2E9PXV9 151 aa11.3□□□□□ -0.6
Ret-202ENSMUST00000088790 Naa38Q9D2U5 125 aa11.3□□□□□ -0.6
Ret-202ENSMUST00000088790 Gm28539A0A087WSL9 92 aa11.3□□□□□ -0.6
Ret-202ENSMUST00000088790 P06329 120 aa11.3□□□□□ -0.6
Ret-202ENSMUST00000088790 Rpl28P41105 137 aaKnown RBP11.3□□□□□ -0.6
Ret-202ENSMUST00000088790 Spink8Q09TK9 105 aa11.3□□□□□ -0.6
Ret-202ENSMUST00000088790 A830005F24RikQ8BRT5 167 aa11.3□□□□□ -0.6
Ret-202ENSMUST00000088790 U90926O08546 118 aa11.29□□□□□ -0.6
Ret-202ENSMUST00000088790 Tcl1b5P56845 121 aa11.29□□□□□ -0.6
Ret-202ENSMUST00000088790 Ighv8-11A0A075B5X4 119 aa11.29□□□□□ -0.6
Ret-202ENSMUST00000088790 4930524J08RikQ9CUJ5 163 aa11.29□□□□□ -0.6
Ret-202ENSMUST00000088790 Ndufc1Q9CQY9 76 aa11.28□□□□□ -0.6
Ret-202ENSMUST00000088790 Gm10135F6TEE5 83 aa11.28□□□□□ -0.6
Ret-202ENSMUST00000088790 CdsnQ7TPC1 561 aa11.28□□□□□ -0.6
Ret-202ENSMUST00000088790 Fam19a5Q91WE9 132 aa11.28□□□□□ -0.6
Ret-202ENSMUST00000088790 4930556J24RikQ9D4U7 146 aa11.28□□□□□ -0.6
Ret-202ENSMUST00000088790 CenpwQ3URR0 86 aa11.27□□□□□ -0.6
Ret-202ENSMUST00000088790 Cep192E9Q4Y4 2514 aaKnown RBP11.26□□□□□ -0.61
Ret-202ENSMUST00000088790 Ankrd17Q99NH0 2603 aaKnown RBP11.26□□□□□ -0.61
Ret-202ENSMUST00000088790 ScxQ64124 207 aa11.26□□□□□ -0.61
Ret-202ENSMUST00000088790 Gm5142Q8C5X9 133 aa11.26□□□□□ -0.61
Ret-202ENSMUST00000088790 Prr15lQ8JZM2 100 aa11.26□□□□□ -0.61
Ret-202ENSMUST00000088790 Crip2Q9DCT8 208 aaKnown RBP11.26□□□□□ -0.61
Ret-202ENSMUST00000088790 Ankrd11E9Q4F7 2643 aa11.26□□□□□ -0.61
Ret-202ENSMUST00000088790 Igkv4-92A0A0B4J1I2 117 aa11.25□□□□□ -0.61
Ret-202ENSMUST00000088790 Cfap54Q8C6S9 3106 aa11.25□□□□□ -0.61
Ret-202ENSMUST00000088790 PscaP57096 123 aa11.25□□□□□ -0.61
Ret-202ENSMUST00000088790 9530003J23RikQ8BM26 151 aa11.25□□□□□ -0.61
Ret-202ENSMUST00000088790 CicQ924A2 2510 aa11.25□□□□□ -0.61
Ret-202ENSMUST00000088790 Klk9Q32M27 251 aa11.25□□□□□ -0.61
Ret-202ENSMUST00000088790 Gm10549Q3URY4 149 aa11.25□□□□□ -0.61
Ret-202ENSMUST00000088790 Cox7bP56393 80 aa11.24□□□□□ -0.61
Ret-202ENSMUST00000088790 Gcn1E9PVA8 2671 aaKnown RBP11.24□□□□□ -0.61
Ret-202ENSMUST00000088790 Myo15bI7HPW8 3033 aa11.24□□□□□ -0.61
Ret-202ENSMUST00000088790 2310009B15RikA0A0A6YWI4 143 aa11.24□□□□□ -0.61
Ret-202ENSMUST00000088790 P06320 134 aa11.24□□□□□ -0.61
Ret-202ENSMUST00000088790 Zfand2aQ9JII7 171 aa11.24□□□□□ -0.61
Ret-202ENSMUST00000088790 Prrc2cQ3TLH4 2846 aaKnown RBP11.23□□□□□ -0.61
Ret-202ENSMUST00000088790 Vpreb3D3Z6J4 130 aa11.23□□□□□ -0.61
Ret-202ENSMUST00000088790 Odf3l2Q3TZ65 277 aa11.23□□□□□ -0.61
Ret-202ENSMUST00000088790 Rnf152Q8BG47 203 aa11.23□□□□□ -0.61
Ret-202ENSMUST00000088790 NpwA0A1L1STR8 176 aa11.23□□□□□ -0.61
Ret-202ENSMUST00000088790 Gm10845Q3UNY9 185 aa11.22□□□□□ -0.61
Ret-202ENSMUST00000088790 Trav14-1A0A0G2JF94 121 aa11.21□□□□□ -0.61
Ret-202ENSMUST00000088790 Wfdc10Q3V2J9 124 aa11.21□□□□□ -0.62
Ret-202ENSMUST00000088790 Krtap26-1Q9D7N2 215 aa11.2□□□□□ -0.62
Ret-202ENSMUST00000088790 Gm4707V9GXN5 68 aa11.2□□□□□ -0.62
Ret-202ENSMUST00000088790 SycnQ8VCK7 134 aa11.19□□□□□ -0.62
Ret-202ENSMUST00000088790 Serp2Q6TAW2 65 aa11.19□□□□□ -0.62
Ret-202ENSMUST00000088790 Defb45Q3V490 66 aa11.19□□□□□ -0.62
Ret-202ENSMUST00000088790 Ighv8-13A0A075B5Y0 101 aa11.18□□□□□ -0.62
Ret-202ENSMUST00000088790 TeppQ6IMH0 216 aa11.18□□□□□ -0.62
Ret-202ENSMUST00000088790 Vpreb2P13373 142 aa11.17□□□□□ -0.62
Ret-202ENSMUST00000088790 Nupr2Q497P3 102 aa11.16□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 47.1 ms