RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Wfdc12Q9JHY3 85 aa10.68□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Pla2g2eQ9QUL3 142 aa10.68□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Gm19935A0A1B0GSF9 52 aa10.67□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 B230217C12RikE9Q3Z1 139 aa10.67□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Gm21748Q3UE70 102 aa10.67□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Pcsk5Q04592 1877 aa10.67□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Gm3443F7CCV5 94 aa10.67□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Ighv8-11A0A075B5X4 119 aa10.66□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 A0A286YCN5 57 aa10.66□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Cyyr1Q8VIH7 165 aa10.66□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 4930535I16RikQ9CUI2 172 aa10.66□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Tanc2A2A690 1994 aa10.66□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 CrygeQ03740 174 aa10.66□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Gpha2Q925Q5 128 aa10.66□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 P84750 121 aa10.65□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 4930524J08RikQ9CUJ5 163 aa10.65□□□□□ -0.7
Pcdh20-201ENSMUST00000061628 Tns1E9Q0S6 1888 aaKnown RBP10.64□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Defb40Q70KL2 73 aa10.64□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Gm5464Q3UY29 175 aa10.63□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Gm12057A0A087WR21 115 aa10.63□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Gm10549Q3URY4 149 aa10.62□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Gm26566Q8CAC1 153 aa10.62□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Crip3Q6Q6R3 243 aa10.62□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Rif1Q6PR54 2419 aaKnown RBP10.62□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Igkv3-12A0A140T8P0 119 aa10.62□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 ScxQ64124 207 aa10.62□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 NbasE9Q411 2356 aa10.61□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Ifitm6A0A1B0GS75 124 aa10.61□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Prr9Q8BV84 116 aa10.61□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Gm5142Q8C5X9 133 aa10.61□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Ighv8-13A0A075B5Y0 101 aa10.61□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Defb2P82020 71 aa10.61□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Gm10845Q3UNY9 185 aa10.61□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Gm17509Q9CZ61 145 aa10.6□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Gm10337F7DEP7 55 aa10.6□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Znf580Q9DB38 172 aa10.6□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Col4a4Q9QZR9 1682 aa10.59□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 D730001G18RikA0A087WQU7 115 aa10.59□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 NpwA0A1L1STR8 176 aa10.59□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Cd164l2Q9D6W7 172 aa10.59□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Gm9573F7C950 1606 aa10.59□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Arid1bE9Q4N7 2244 aa10.59□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Apoc4Q61268 124 aa10.59□□□□□ -0.71
Pcdh20-201ENSMUST00000061628 Serp1Q9Z1W5 66 aa10.58□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 Ighv2-9A0A075B5Q5 116 aa10.57□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 4930432M17RikQ3V0W9 174 aa10.57□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 BC025920Q3US60 128 aa10.56□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 OtoglF7A4A7 2325 aa10.55□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 2310009B15RikA0A0A6YWI4 143 aa10.55□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 Gm5153P01627 120 aa10.55□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 TeppQ6IMH0 216 aa10.55□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 Wfdc13Q5DQQ6 81 aa10.54□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 Odf3l2Q3TZ65 277 aa10.54□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 UqcrqQ9CQ69 82 aa10.53□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 BC067074F6RXI4 2391 aa10.53□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 Igkv8-28A0A0G2JE47 121 aa10.52□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 C130032M10RikQ8C888 123 aa10.52□□□□□ -0.72
Pcdh20-201ENSMUST00000061628 Zfand2aQ9JII7 171 aa10.52□□□□□ -0.73
Pcdh20-201ENSMUST00000061628 1700074P13RikQ9D9G7 251 aa10.51□□□□□ -0.73
Pcdh20-201ENSMUST00000061628 H2al1mQ9DAD9 105 aa10.51□□□□□ -0.73
Pcdh20-201ENSMUST00000061628 Ntn5Q3UQ22 452 aa10.51□□□□□ -0.73
Pcdh20-201ENSMUST00000061628 Gm43218A0A0G2JGT0 114 aa10.49□□□□□ -0.73
Pcdh20-201ENSMUST00000061628 CdsnQ7TPC1 561 aa10.48□□□□□ -0.73
Pcdh20-201ENSMUST00000061628 Rtl10D3YWW5 146 aa10.47□□□□□ -0.73
Pcdh20-201ENSMUST00000061628 Piezo1E2JF22 2547 aa10.46□□□□□ -0.73
Pcdh20-201ENSMUST00000061628 Defb10Q8R2I8 73 aa10.46□□□□□ -0.73
Pcdh20-201ENSMUST00000061628 Myo9aQ8C170 2542 aa10.46□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Gm9887F6RFI0 207 aa10.46□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Hivep2Q3UHF7 2430 aa10.46□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 3110070M22RikQ9DAQ7 118 aa10.45□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Ighv1-56A0A0A6YXG2 117 aa10.45□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Gm16485Q8C4B7 115 aa10.45□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 PtprbB2RU80 1998 aa10.45□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 TroQ6DIC6 2087 aa10.45□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 C2cd3Q52KB6 2323 aa10.44□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Gm10135F6TEE5 83 aa10.44□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 H2al1kJ3QP08 105 aa10.44□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Gm10267M0QWD8 85 aa10.44□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 9230102O04RikA2ASX7 82 aa10.43□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Abca2P41234 2434 aa10.43□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Lrrk2Q5S006 2527 aa10.42□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Bri3P28662 125 aa10.42□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Lrp4Q8VI56 1905 aa10.42□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Igkv3-7A0A0G2JE31 119 aa10.41□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Wfdc6bF6ULY1 148 aa10.41□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Flg2Q2VIS4 2362 aa10.41□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Q9DAA7 145 aa10.41□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Spink13Q3UTS8 97 aa10.41□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Arhgap32Q811P8 2089 aa10.4□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Srsf12Q8C8K3 266 aa10.4□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Adm2Q7TNK8 150 aa10.4□□□□□ -0.74
Pcdh20-201ENSMUST00000061628 Tln1P26039 2541 aaKnown RBP10.39□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Ankhd1E9PUR0 2548 aaKnown RBP10.39□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Ighv2-5A0A0A6YY69 116 aa10.39□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Chchd10Q7TNL9 138 aa10.38□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Crip2Q9DCT8 208 aaKnown RBP10.38□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Col27a1Q5QNQ9 1845 aa10.38□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Ly6g6cQ9Z1Q4 126 aa10.38□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Ttc28Q80XJ3 2450 aa10.36□□□□□ -0.75
Pcdh20-201ENSMUST00000061628 Csdc2Q91YQ3 154 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms