RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Igkv8-30A0A140T8M3 121 aa12.6□□□□□ -0.39
Usp48-201ENSMUST00000055131 H2al1aQ5M8Q2 105 aa12.6□□□□□ -0.39
Usp48-201ENSMUST00000055131 H2al1eQ810S6 105 aa12.6□□□□□ -0.39
Usp48-201ENSMUST00000055131 Gm11011D3Z3L9 86 aa12.6□□□□□ -0.39
Usp48-201ENSMUST00000055131 Trbv13-2A0A140T8N6 113 aa12.59□□□□□ -0.39
Usp48-201ENSMUST00000055131 Adamts20P59511 1906 aa12.59□□□□□ -0.39
Usp48-201ENSMUST00000055131 Pou2af1Q64693 256 aa12.59□□□□□ -0.39
Usp48-201ENSMUST00000055131 Nav2E9Q842 2432 aa12.59□□□□□ -0.39
Usp48-201ENSMUST00000055131 CdsnQ7TPC1 561 aa12.58□□□□□ -0.4
Usp48-201ENSMUST00000055131 Gm26566Q8CAC1 153 aa12.58□□□□□ -0.4
Usp48-201ENSMUST00000055131 B230217C12RikE9Q3Z1 139 aa12.58□□□□□ -0.4
Usp48-201ENSMUST00000055131 NpwA0A1L1STR8 176 aa12.57□□□□□ -0.4
Usp48-201ENSMUST00000055131 9230102O04RikA2ASX7 82 aa12.57□□□□□ -0.4
Usp48-201ENSMUST00000055131 Tln1P26039 2541 aaKnown RBP12.57□□□□□ -0.4
Usp48-201ENSMUST00000055131 Pla2g1bQ9Z0Y2 146 aa12.56□□□□□ -0.4
Usp48-201ENSMUST00000055131 B430305J03RikQ8BQQ8 176 aa12.56□□□□□ -0.4
Usp48-201ENSMUST00000055131 AcanQ61282 2132 aaKnown RBP12.56□□□□□ -0.4
Usp48-201ENSMUST00000055131 A930009A15RikG3UYI6 118 aa12.56□□□□□ -0.4
Usp48-201ENSMUST00000055131 Q8K1L6 76 aa12.56□□□□□ -0.4
Usp48-201ENSMUST00000055131 Gm20604F8WIA3 75 aa12.55□□□□□ -0.4
Usp48-201ENSMUST00000055131 CenpwQ3URR0 86 aa12.55□□□□□ -0.4
Usp48-201ENSMUST00000055131 D730001G18RikA0A087WQU7 115 aa12.54□□□□□ -0.4
Usp48-201ENSMUST00000055131 A0A286YE49 62 aa12.54□□□□□ -0.4
Usp48-201ENSMUST00000055131 P84750 121 aa12.53□□□□□ -0.4
Usp48-201ENSMUST00000055131 Sox16Q62247 57 aa12.53□□□□□ -0.4
Usp48-201ENSMUST00000055131 1700074P13RikQ9D9G7 251 aa12.53□□□□□ -0.4
Usp48-201ENSMUST00000055131 Arid1bE9Q4N7 2244 aa12.52□□□□□ -0.41
Usp48-201ENSMUST00000055131 Cd27P41272 250 aa12.52□□□□□ -0.41
Usp48-201ENSMUST00000055131 TroQ6DIC6 2087 aa12.51□□□□□ -0.41
Usp48-201ENSMUST00000055131 Znf706Q9D115 76 aaKnown RBP12.51□□□□□ -0.41
Usp48-201ENSMUST00000055131 Wfdc3Q14AE4 130 aa12.5□□□□□ -0.41
Usp48-201ENSMUST00000055131 Notch2O35516 2470 aa12.5□□□□□ -0.41
Usp48-201ENSMUST00000055131 Gm3443F7CCV5 94 aa12.5□□□□□ -0.41
Usp48-201ENSMUST00000055131 CrygeQ03740 174 aa12.5□□□□□ -0.41
Usp48-201ENSMUST00000055131 Rpl28P41105 137 aaKnown RBP12.49□□□□□ -0.41
Usp48-201ENSMUST00000055131 Ndufb1P0DN34 57 aa12.49□□□□□ -0.41
Usp48-201ENSMUST00000055131 Trav14-1A0A0G2JF94 121 aa12.49□□□□□ -0.41
Usp48-201ENSMUST00000055131 Ighv2-9-1A0A075B697 116 aa12.48□□□□□ -0.41
Usp48-201ENSMUST00000055131 Ifitm6A0A1B0GS75 124 aa12.48□□□□□ -0.41
Usp48-201ENSMUST00000055131 2310009B15RikA0A0A6YWI4 143 aa12.48□□□□□ -0.41
Usp48-201ENSMUST00000055131 TeppQ6IMH0 216 aa12.47□□□□□ -0.41
Usp48-201ENSMUST00000055131 Defb38Q7TNV7 63 aa12.47□□□□□ -0.41
Usp48-201ENSMUST00000055131 4930556J24RikQ9D4U7 146 aa12.47□□□□□ -0.41
Usp48-201ENSMUST00000055131 BC067074F6RXI4 2391 aa12.47□□□□□ -0.41
Usp48-201ENSMUST00000055131 Gm10267M0QWD8 85 aa12.47□□□□□ -0.41
Usp48-201ENSMUST00000055131 Cd164l2Q9D6W7 172 aa12.47□□□□□ -0.41
Usp48-201ENSMUST00000055131 Gm5142Q8C5X9 133 aa12.46□□□□□ -0.41
Usp48-201ENSMUST00000055131 Bri3P28662 125 aa12.46□□□□□ -0.41
Usp48-201ENSMUST00000055131 4930524J08RikQ9CUJ5 163 aa12.46□□□□□ -0.41
Usp48-201ENSMUST00000055131 Krtap27-1E9PX37 202 aa12.46□□□□□ -0.42
Usp48-201ENSMUST00000055131 Crip2Q9DCT8 208 aaKnown RBP12.44□□□□□ -0.42
Usp48-201ENSMUST00000055131 Myo9aQ8C170 2542 aa12.44□□□□□ -0.42
Usp48-201ENSMUST00000055131 Ttc28Q80XJ3 2450 aa12.44□□□□□ -0.42
Usp48-201ENSMUST00000055131 C2cd3Q52KB6 2323 aa12.43□□□□□ -0.42
Usp48-201ENSMUST00000055131 Igkv3-7A0A0G2JE31 119 aa12.43□□□□□ -0.42
Usp48-201ENSMUST00000055131 Ptpn13Q64512 2453 aa12.43□□□□□ -0.42
Usp48-201ENSMUST00000055131 H2al1mQ9DAD9 105 aa12.43□□□□□ -0.42
Usp48-201ENSMUST00000055131 Ankhd1E9PUR0 2548 aaKnown RBP12.43□□□□□ -0.42
Usp48-201ENSMUST00000055131 Gm42715A0A087WP63 3095 aaKnown RBP12.43□□□□□ -0.42
Usp48-201ENSMUST00000055131 4930432M17RikQ3V0W9 174 aa12.42□□□□□ -0.42
Usp48-201ENSMUST00000055131 UtrnE9Q6R7 3430 aa12.42□□□□□ -0.42
Usp48-201ENSMUST00000055131 Flg2Q2VIS4 2362 aa12.42□□□□□ -0.42
Usp48-201ENSMUST00000055131 Tns1E9Q0S6 1888 aaKnown RBP12.41□□□□□ -0.42
Usp48-201ENSMUST00000055131 Prr9Q8BV84 116 aa12.41□□□□□ -0.42
Usp48-201ENSMUST00000055131 Shisa2Q8QZV2 295 aa12.4□□□□□ -0.42
Usp48-201ENSMUST00000055131 Rtl10D3YWW5 146 aa12.4□□□□□ -0.42
Usp48-201ENSMUST00000055131 Sprr2jO70561 109 aa12.4□□□□□ -0.42
Usp48-201ENSMUST00000055131 Psmb11Q8BG41 302 aa12.39□□□□□ -0.43
Usp48-201ENSMUST00000055131 Arhgap32Q811P8 2089 aa12.38□□□□□ -0.43
Usp48-201ENSMUST00000055131 1600014C23RikQ9DAX4 101 aa12.38□□□□□ -0.43
Usp48-201ENSMUST00000055131 Wfdc6bF6ULY1 148 aa12.38□□□□□ -0.43
Usp48-201ENSMUST00000055131 Adm2Q7TNK8 150 aa12.37□□□□□ -0.43
Usp48-201ENSMUST00000055131 Gm10135F6TEE5 83 aa12.37□□□□□ -0.43
Usp48-201ENSMUST00000055131 Q9DAB9 146 aa12.37□□□□□ -0.43
Usp48-201ENSMUST00000055131 Igkv8-28A0A0G2JE47 121 aa12.37□□□□□ -0.43
Usp48-201ENSMUST00000055131 C130032M10RikQ8C888 123 aa12.37□□□□□ -0.43
Usp48-201ENSMUST00000055131 Gm5153P01627 120 aa12.36□□□□□ -0.43
Usp48-201ENSMUST00000055131 Gm9887F6RFI0 207 aa12.35□□□□□ -0.43
Usp48-201ENSMUST00000055131 Spink13Q3UTS8 97 aa12.35□□□□□ -0.43
Usp48-201ENSMUST00000055131 Gm5464Q3UY29 175 aa12.35□□□□□ -0.43
Usp48-201ENSMUST00000055131 Gm17509Q9CZ61 145 aa12.35□□□□□ -0.43
Usp48-201ENSMUST00000055131 Ighv2-9A0A075B5Q5 116 aa12.35□□□□□ -0.43
Usp48-201ENSMUST00000055131 Ly6g6cQ9Z1Q4 126 aa12.35□□□□□ -0.43
Usp48-201ENSMUST00000055131 Ighv8-13A0A075B5Y0 101 aa12.35□□□□□ -0.43
Usp48-201ENSMUST00000055131 Gm10845Q3UNY9 185 aa12.34□□□□□ -0.43
Usp48-201ENSMUST00000055131 Gm10300Q8C8P7 189 aa12.34□□□□□ -0.43
Usp48-201ENSMUST00000055131 Serp1Q9Z1W5 66 aa12.34□□□□□ -0.43
Usp48-201ENSMUST00000055131 Ep400Q8CHI8 3072 aaKnown RBP12.34□□□□□ -0.43
Usp48-201ENSMUST00000055131 Gm16485Q8C4B7 115 aa12.34□□□□□ -0.43
Usp48-201ENSMUST00000055131 Defb10Q8R2I8 73 aa12.34□□□□□ -0.43
Usp48-201ENSMUST00000055131 Apoc4Q61268 124 aa12.33□□□□□ -0.44
Usp48-201ENSMUST00000055131 Kiaa1549Q68FD9 1940 aa12.32□□□□□ -0.44
Usp48-201ENSMUST00000055131 SetxA2AKX3 2646 aa12.31□□□□□ -0.44
Usp48-201ENSMUST00000055131 Gm19935A0A1B0GSF9 52 aa12.3□□□□□ -0.44
Usp48-201ENSMUST00000055131 Gm9573F7C950 1606 aa12.29□□□□□ -0.44
Usp48-201ENSMUST00000055131 A830031A19RikQ8BNT5 113 aa12.28□□□□□ -0.44
Usp48-201ENSMUST00000055131 Wfdc17Q5SSJ1 76 aa12.28□□□□□ -0.44
Usp48-201ENSMUST00000055131 Odf3l2Q3TZ65 277 aa12.28□□□□□ -0.44
Usp48-201ENSMUST00000055131 TrrapQ80YV3 2565 aaKnown RBP12.27□□□□□ -0.45
Usp48-201ENSMUST00000055131 Gm10337F7DEP7 55 aa12.26□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 50.2 ms