RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Cdc42se2Q8BGH7 84 aa13.35□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Chd9Q8BYH8 2885 aa13.34□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Klk12B2RVZ0 247 aa13.34□□□□□ -0.27
Ubp1-201ENSMUST00000009885 PrlhG3UWC3 86 aa13.34□□□□□ -0.27
Ubp1-201ENSMUST00000009885 MifP34884 115 aaKnown RBP13.34□□□□□ -0.27
Ubp1-201ENSMUST00000009885 Cep192E9Q4Y4 2514 aaKnown RBP13.33□□□□□ -0.28
Ubp1-201ENSMUST00000009885 7530416G11RikJ3QJX6 159 aa13.32□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Ucn2Q99ML8 113 aa13.32□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Tmem254aP0DN89 123 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Tmem254bP0DN90 123 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Tmem254cP0DN91 123 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 SmcpP15265 143 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Rpl39lQ9CQD0 51 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Krtap26-1Q9D7N2 215 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Serp2Q6TAW2 65 aa13.31□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Rpl28P41105 137 aaKnown RBP13.3□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Myo18bE9PV66 2605 aa13.3□□□□□ -0.28
Ubp1-201ENSMUST00000009885 GhrhP16043 103 aa13.3□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Vmo1Q5SXG7 201 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 E130218I03RikA0A0U1RNU5 63 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Defa27F2Z403 93 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 EnhoQ8K1D8 76 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Lelp1Q9DAE3 120 aa13.29□□□□□ -0.28
Ubp1-201ENSMUST00000009885 GfyJ3KML8 504 aa13.28□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Tmem86bQ497J1 226 aa13.28□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Chd6A3KFM7 2711 aa13.28□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Plac8l1Q08EJ0 177 aa13.28□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Ubl5Q9EPV8 73 aa13.27□□□□□ -0.28
Ubp1-201ENSMUST00000009885 Pla2g2cP48076 150 aa13.27□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Igkv1-99F6XWB2 120 aa13.27□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Klk11Q9QYN3 276 aa13.27□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Bri3P28662 125 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Gm10549Q3URY4 149 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Gm9925F6T2U3 160 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 2010109I03RikQ9CQ11 111 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 4930546C10RikE9Q4Y3 121 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Ppp1r32Q148A4 427 aa13.26□□□□□ -0.29
Ubp1-201ENSMUST00000009885 BikO70337 150 aa13.25□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Lamtor3O88653 124 aa13.24□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Fam19a1Q7TPG8 133 aa13.23□□□□□ -0.29
Ubp1-201ENSMUST00000009885 A830031A19RikQ8BNT5 113 aa13.23□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Zfp462B1AWL2 2495 aaKnown RBP13.22□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Igkv8-16A0A0G2JDG9 121 aa13.22□□□□□ -0.29
Ubp1-201ENSMUST00000009885 Tmem258P61166 79 aa13.21□□□□□ -0.3
Ubp1-201ENSMUST00000009885 LrbaQ9ESE1 2856 aa13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Gm5142Q8C5X9 133 aa13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Utp20Q5XG71 2788 aaKnown RBP13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Gm3443F7CCV5 94 aa13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Tfpi2O35536 230 aa13.2□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Ormdl1Q921I0 153 aa13.18□□□□□ -0.3
Ubp1-201ENSMUST00000009885 FlncQ8VHX6 2726 aaKnown RBP13.18□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Q8R092 253 aa13.18□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Reg3dQ9QUS9 175 aa13.17□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Defb26Q30KN7 186 aa13.17□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Mrpl55Q9CZ83 127 aa13.16□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Gm10518F6UQQ9 182 aa13.16□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Pip4p1Q3TWL2 284 aa13.16□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Gm9913Q8BQQ2 135 aa13.16□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Fam19a5Q91WE9 132 aa13.15□□□□□ -0.3
Ubp1-201ENSMUST00000009885 Tmem223Q9CQE2 199 aaKnown RBP13.15□□□□□ -0.3
Ubp1-201ENSMUST00000009885 CrygdP04342 174 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Gm10845Q3UNY9 185 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Trbv13-2A0A140T8N6 113 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Igkv8-24A0A140T8P5 121 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Cystm1Q8K353 104 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Defb42Q8BVB5 75 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Wfdc12Q9JHY3 85 aa13.14□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Igkv4-58A0A0G2JGI6 119 aa13.13□□□□□ -0.31
Ubp1-201ENSMUST00000009885 4930519P11RikQ9CUJ8 166 aa13.13□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Tm2d2Q8R0I4 213 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 SnurfQ9WU12 71 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Rnase1P00683 149 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Leap2Q91V13 76 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Zfand2aQ9JII7 171 aa13.12□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Nf1Q04690 2841 aa13.11□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Ifitm6A0A1B0GS75 124 aa13.11□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Gm19935A0A1B0GSF9 52 aa13.1□□□□□ -0.31
Ubp1-201ENSMUST00000009885 CrygaP04345 174 aa13.1□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Igkv8-18A0A0B4J1J3 123 aa13.1□□□□□ -0.31
Ubp1-201ENSMUST00000009885 Itpr3P70227 2670 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Ighv1-56A0A0A6YXG2 117 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Epg5Q80TA9 2572 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Celsr2Q9R0M0 2920 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Inafm2A0A1L1STD6 152 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Rbm3O89086 153 aaKnown RBP13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Pet100P0DJE0 76 aa13.08□□□□□ -0.32
Ubp1-201ENSMUST00000009885 1810062G17RikG3X8Y2 129 aa13.07□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Defa28D3Z1V9 94 aa13.06□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Ube2d4D3YUH6 135 aa13.06□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Pla2g1bQ9Z0Y2 146 aa13.05□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Vpreb1P13372 142 aa13.05□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Rps28P62858 69 aaKnown RBP13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Mrpl52Q9D0Y8 121 aa13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Q9DAA7 145 aa13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Igkv4-61A0A0G2JH00 117 aa13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 PrcdQ00LT2 53 aa13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 TrrapQ80YV3 2565 aaKnown RBP13.04□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Ighv13-2A0A0A6YWN3 119 aa13.03□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Gm8439G3UWA7 96 aa13.03□□□□□ -0.32
Ubp1-201ENSMUST00000009885 Defb50Q6TU36 73 aa13.03□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 116 ms