RNA–Protein interactions for RNA: ENSMUST00000102632.6

Sort1-201, Transcript of Sortilin, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Sort1, Length 6,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sort1-201ENSMUST00000102632 Ighv1-61P01749 117 aa13.13□□□□□ -0.31
Sort1-201ENSMUST00000102632 Ighv1-72P01751 139 aa13.13□□□□□ -0.31
Sort1-201ENSMUST00000102632 Tet2Q4JK59 1912 aaKnown RBP13.13□□□□□ -0.31
Sort1-201ENSMUST00000102632 Gm12689Q8BQU9 117 aa13.12□□□□□ -0.31
Sort1-201ENSMUST00000102632 Pla2g2dQ9WVF6 144 aa13.12□□□□□ -0.31
Sort1-201ENSMUST00000102632 Lhfpl1Q80SV1 220 aa13.12□□□□□ -0.31
Sort1-201ENSMUST00000102632 1700010B08RikQ9DAI7 102 aa13.12□□□□□ -0.31
Sort1-201ENSMUST00000102632 P01755 137 aa13.12□□□□□ -0.31
Sort1-201ENSMUST00000102632 Q9CX25 107 aa13.12□□□□□ -0.31
Sort1-201ENSMUST00000102632 Trav4d-3A0A075B625 110 aa13.11□□□□□ -0.31
Sort1-201ENSMUST00000102632 P18527 97 aa13.1□□□□□ -0.31
Sort1-201ENSMUST00000102632 Trav12-3A0A075B648 115 aa13.1□□□□□ -0.31
Sort1-201ENSMUST00000102632 Mlst8Q9DCJ1 326 aa13.1□□□□□ -0.31
Sort1-201ENSMUST00000102632 Cox8cA6H666 72 aa13.09□□□□□ -0.31
Sort1-201ENSMUST00000102632 Vpreb2P13373 142 aa13.09□□□□□ -0.31
Sort1-201ENSMUST00000102632 C2cd3Q52KB6 2323 aa13.09□□□□□ -0.31
Sort1-201ENSMUST00000102632 Q8K1L6 76 aa13.08□□□□□ -0.32
Sort1-201ENSMUST00000102632 Smim20D3Z7Q2 69 aa13.08□□□□□ -0.32
Sort1-201ENSMUST00000102632 Rbx1P62878 108 aa13.08□□□□□ -0.32
Sort1-201ENSMUST00000102632 Q9D131 166 aa13.07□□□□□ -0.32
Sort1-201ENSMUST00000102632 Ormdl1Q921I0 153 aa13.07□□□□□ -0.32
Sort1-201ENSMUST00000102632 P04944 107 aa13.07□□□□□ -0.32
Sort1-201ENSMUST00000102632 Ep300B2RWS6 2412 aa13.06□□□□□ -0.32
Sort1-201ENSMUST00000102632 C1qcQ02105 246 aa13.06□□□□□ -0.32
Sort1-201ENSMUST00000102632 Prrc2aQ7TSC1 2158 aaKnown RBP13.06□□□□□ -0.32
Sort1-201ENSMUST00000102632 Rnf152Q8BG47 203 aa13.06□□□□□ -0.32
Sort1-201ENSMUST00000102632 Pcnx2Q5DU28 2122 aa13.06□□□□□ -0.32
Sort1-201ENSMUST00000102632 Iglc1A0A0G2JE99 106 aa13.06□□□□□ -0.32
Sort1-201ENSMUST00000102632 Trbv13-2A0A140T8N6 113 aa13.06□□□□□ -0.32
Sort1-201ENSMUST00000102632 Wisp3D3Z5L9 354 aa13.06□□□□□ -0.32
Sort1-201ENSMUST00000102632 P01843 105 aa13.06□□□□□ -0.32
Sort1-201ENSMUST00000102632 TeppQ6IMH0 216 aa13.05□□□□□ -0.32
Sort1-201ENSMUST00000102632 Defb42Q8BVB5 75 aa13.05□□□□□ -0.32
Sort1-201ENSMUST00000102632 Jmjd1cQ69ZK6 2350 aa13.04□□□□□ -0.32
Sort1-201ENSMUST00000102632 Gm10267M0QWD8 85 aa13.04□□□□□ -0.32
Sort1-201ENSMUST00000102632 Crip2Q9DCT8 208 aaKnown RBP13.04□□□□□ -0.32
Sort1-201ENSMUST00000102632 AgrnA2ASQ1 1950 aa13.03□□□□□ -0.32
Sort1-201ENSMUST00000102632 Odf3Q920N1 254 aa13.03□□□□□ -0.32
Sort1-201ENSMUST00000102632 Gm44965A0A0N4SVR3 59 aa13.03□□□□□ -0.32
Sort1-201ENSMUST00000102632 Tnfrsf23Q9ER63 176 aa13.02□□□□□ -0.32
Sort1-201ENSMUST00000102632 BaalcQ8VHV1 145 aa13.02□□□□□ -0.32
Sort1-201ENSMUST00000102632 Igf1P05017 153 aa13.02□□□□□ -0.33
Sort1-201ENSMUST00000102632 SonQ9QX47 2444 aaKnown RBP13.02□□□□□ -0.33
Sort1-201ENSMUST00000102632 Ighv1-56A0A0A6YXG2 117 aa13.01□□□□□ -0.33
Sort1-201ENSMUST00000102632 Ube2d4D3YUH6 135 aa13.01□□□□□ -0.33
Sort1-201ENSMUST00000102632 7420426K07RikQ3UX66 186 aa13.01□□□□□ -0.33
Sort1-201ENSMUST00000102632 Trav12d-3A0A075B6A4 115 aa13.01□□□□□ -0.33
Sort1-201ENSMUST00000102632 Gm16485Q8C4B7 115 aa13.01□□□□□ -0.33
Sort1-201ENSMUST00000102632 Ighv1-75A0A075B5Y2 117 aa13.01□□□□□ -0.33
Sort1-201ENSMUST00000102632 Gm17359A0A0G2JEB7 487 aa13□□□□□ -0.33
Sort1-201ENSMUST00000102632 Plxnb3Q9QY40 1902 aa13□□□□□ -0.33
Sort1-201ENSMUST00000102632 Serp1Q9Z1W5 66 aa12.99□□□□□ -0.33
Sort1-201ENSMUST00000102632 Sorl1O88307 2215 aaKnown RBP12.99□□□□□ -0.33
Sort1-201ENSMUST00000102632 Gm3250E9Q1M3 230 aa12.99□□□□□ -0.33
Sort1-201ENSMUST00000102632 C130032M10RikQ8C888 123 aa12.98□□□□□ -0.33
Sort1-201ENSMUST00000102632 Eif4ebp1Q60876 117 aa12.97□□□□□ -0.33
Sort1-201ENSMUST00000102632 FcorP0DJI6 106 aa12.97□□□□□ -0.33
Sort1-201ENSMUST00000102632 Obox8V9GWY9 217 aa12.97□□□□□ -0.33
Sort1-201ENSMUST00000102632 Gm5878E9PUB3 99 aa12.97□□□□□ -0.33
Sort1-201ENSMUST00000102632 EnhoQ8K1D8 76 aa12.97□□□□□ -0.33
Sort1-201ENSMUST00000102632 NpyP57774 97 aa12.97□□□□□ -0.33
Sort1-201ENSMUST00000102632 Ighv8-5A0A0A6YY60 119 aa12.96□□□□□ -0.33
Sort1-201ENSMUST00000102632 Gm10490F6VBM2 120 aa12.96□□□□□ -0.33
Sort1-201ENSMUST00000102632 Lypd6Q8BPP5 171 aa12.96□□□□□ -0.33
Sort1-201ENSMUST00000102632 TshbP12656 138 aa12.95□□□□□ -0.34
Sort1-201ENSMUST00000102632 P01659 112 aa12.95□□□□□ -0.34
Sort1-201ENSMUST00000102632 Snai3Q9QY31 287 aa12.94□□□□□ -0.34
Sort1-201ENSMUST00000102632 AtrxQ61687 2476 aaKnown RBP12.94□□□□□ -0.34
Sort1-201ENSMUST00000102632 Ndufa4l2Q4FZG9 87 aa12.93□□□□□ -0.34
Sort1-201ENSMUST00000102632 Sec16aA2AIX1 2377 aa12.93□□□□□ -0.34
Sort1-201ENSMUST00000102632 Cd164l2Q9D6W7 172 aa12.93□□□□□ -0.34
Sort1-201ENSMUST00000102632 Triap1Q9D8Z2 76 aa12.93□□□□□ -0.34
Sort1-201ENSMUST00000102632 Pcnx3Q8VI59 2028 aa12.92□□□□□ -0.34
Sort1-201ENSMUST00000102632 Ighv2-6A0A075B6A7 116 aa12.92□□□□□ -0.34
Sort1-201ENSMUST00000102632 Psmb8P28063 276 aa12.92□□□□□ -0.34
Sort1-201ENSMUST00000102632 4930564D02RikQ9D4S4 103 aa12.9□□□□□ -0.34
Sort1-201ENSMUST00000102632 Pcp4P63054 62 aa12.9□□□□□ -0.34
Sort1-201ENSMUST00000102632 Arid1bE9Q4N7 2244 aa12.89□□□□□ -0.35
Sort1-201ENSMUST00000102632 Gm9922Q8C3P1 144 aa12.88□□□□□ -0.35
Sort1-201ENSMUST00000102632 Cspg4Q8VHY0 2327 aa12.88□□□□□ -0.35
Sort1-201ENSMUST00000102632 Pde6gP09174 87 aa12.87□□□□□ -0.35
Sort1-201ENSMUST00000102632 4930519P11RikQ9CUJ8 166 aa12.87□□□□□ -0.35
Sort1-201ENSMUST00000102632 Ighv2-9A0A075B5Q5 116 aa12.86□□□□□ -0.35
Sort1-201ENSMUST00000102632 Chchd7Q8K2Q5 85 aa12.86□□□□□ -0.35
Sort1-201ENSMUST00000102632 Gm5629P06327 117 aa12.86□□□□□ -0.35
Sort1-201ENSMUST00000102632 Gm10300Q8C8P7 189 aa12.86□□□□□ -0.35
Sort1-201ENSMUST00000102632 A930009A15RikG3UYI6 118 aa12.86□□□□□ -0.35
Sort1-201ENSMUST00000102632 Spg11Q3UHA3 2430 aa12.86□□□□□ -0.35
Sort1-201ENSMUST00000102632 Kiaa1549Q68FD9 1940 aa12.84□□□□□ -0.35
Sort1-201ENSMUST00000102632 H2al1kJ3QP08 105 aa12.84□□□□□ -0.35
Sort1-201ENSMUST00000102632 Tns1E9Q0S6 1888 aaKnown RBP12.84□□□□□ -0.35
Sort1-201ENSMUST00000102632 Fam240bJ3QMB3 78 aa12.84□□□□□ -0.35
Sort1-201ENSMUST00000102632 Tmem254aP0DN89 123 aa12.84□□□□□ -0.35
Sort1-201ENSMUST00000102632 Tmem254bP0DN90 123 aa12.84□□□□□ -0.35
Sort1-201ENSMUST00000102632 Tmem254cP0DN91 123 aa12.84□□□□□ -0.35
Sort1-201ENSMUST00000102632 Gm16223Q8CBM3 117 aa12.84□□□□□ -0.35
Sort1-201ENSMUST00000102632 TroQ6DIC6 2087 aa12.83□□□□□ -0.36
Sort1-201ENSMUST00000102632 Vpreb1P13372 142 aa12.83□□□□□ -0.36
Sort1-201ENSMUST00000102632 Ramp1Q9WTJ5 148 aa12.83□□□□□ -0.36
Sort1-201ENSMUST00000102632 Gm10642Q3TWM1 71 aa12.83□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms