Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm25239-201ENSMUST00000174915 86 ntBASIC39.03■■■■□ 3.84
Spg11Q3UHA3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.38■■■■□ 3.41
Spg11Q3UHA3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
Spg11Q3UHA3 Gm24109-201ENSMUST00000175489 103 ntBASIC34.39■■■■□ 3.1
Spg11Q3UHA3 Gm15042-201ENSMUST00000120212 883 ntBASIC33.03■■■□□ 2.88
Spg11Q3UHA3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Spg11Q3UHA3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Spg11Q3UHA3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Spg11Q3UHA3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
Spg11Q3UHA3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC32.27■■■□□ 2.76
Spg11Q3UHA3 Gm23366-201ENSMUST00000175022 89 ntBASIC32.26■■■□□ 2.75
Spg11Q3UHA3 Gm15045-201ENSMUST00000117359 883 ntBASIC32.25■■■□□ 2.75
Spg11Q3UHA3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Spg11Q3UHA3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Spg11Q3UHA3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.02■■■□□ 2.72
Spg11Q3UHA3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31.97■■■□□ 2.71
Spg11Q3UHA3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Spg11Q3UHA3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC31.19■■■□□ 2.58
Spg11Q3UHA3 Gm25238-201ENSMUST00000174914 89 ntBASIC31.09■■■□□ 2.57
Spg11Q3UHA3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Spg11Q3UHA3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Spg11Q3UHA3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
Spg11Q3UHA3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Spg11Q3UHA3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC30.35■■■□□ 2.45
Spg11Q3UHA3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC30.23■■■□□ 2.43
Spg11Q3UHA3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.22■■■□□ 2.43
Spg11Q3UHA3 Gm25262-201ENSMUST00000174934 133 ntBASIC30.17■■■□□ 2.42
Spg11Q3UHA3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.94■■■□□ 2.38
Spg11Q3UHA3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.88■■■□□ 2.37
Spg11Q3UHA3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.84■■■□□ 2.37
Spg11Q3UHA3 Gm26115-201ENSMUST00000175605 87 ntBASIC29.79■■■□□ 2.36
Spg11Q3UHA3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.71■■■□□ 2.35
Spg11Q3UHA3 Gm8109-201ENSMUST00000194076 746 ntBASIC29.62■■■□□ 2.33
Spg11Q3UHA3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Spg11Q3UHA3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.51■■■□□ 2.31
Spg11Q3UHA3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Spg11Q3UHA3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Spg11Q3UHA3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.35■■■□□ 2.29
Spg11Q3UHA3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Spg11Q3UHA3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.16■■■□□ 2.26
Spg11Q3UHA3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC29.13■■■□□ 2.25
Spg11Q3UHA3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Spg11Q3UHA3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Spg11Q3UHA3 Rab21-202ENSMUST00000218831 843 ntBASIC28.95■■■□□ 2.22
Spg11Q3UHA3 Gm27325-201ENSMUST00000175467 74 ntBASIC28.93■■■□□ 2.22
Spg11Q3UHA3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Spg11Q3UHA3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Spg11Q3UHA3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.72■■■□□ 2.19
Spg11Q3UHA3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Spg11Q3UHA3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Spg11Q3UHA3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Spg11Q3UHA3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.64■■■□□ 2.18
Spg11Q3UHA3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.56■■■□□ 2.16
Spg11Q3UHA3 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Spg11Q3UHA3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Spg11Q3UHA3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Spg11Q3UHA3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Spg11Q3UHA3 Gm24804-201ENSMUST00000174982 85 ntBASIC28.5■■■□□ 2.15
Spg11Q3UHA3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Spg11Q3UHA3 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Spg11Q3UHA3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Spg11Q3UHA3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Spg11Q3UHA3 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Spg11Q3UHA3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.35■■■□□ 2.13
Spg11Q3UHA3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Spg11Q3UHA3 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.28■■■□□ 2.12
Spg11Q3UHA3 Gm17082-201ENSMUST00000166043 1091 ntBASIC28.23■■■□□ 2.11
Spg11Q3UHA3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Spg11Q3UHA3 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC28.22■■■□□ 2.11
Spg11Q3UHA3 Zfp131-205ENSMUST00000223812 663 ntBASIC28.18■■■□□ 2.1
Spg11Q3UHA3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Spg11Q3UHA3 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
Spg11Q3UHA3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Spg11Q3UHA3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.09■■■□□ 2.09
Spg11Q3UHA3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Spg11Q3UHA3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Spg11Q3UHA3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Spg11Q3UHA3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Spg11Q3UHA3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Spg11Q3UHA3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Spg11Q3UHA3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.84■■■□□ 2.05
Spg11Q3UHA3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Spg11Q3UHA3 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.83■■■□□ 2.05
Spg11Q3UHA3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.77■■■□□ 2.04
Spg11Q3UHA3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.74■■■□□ 2.03
Spg11Q3UHA3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.73■■■□□ 2.03
Spg11Q3UHA3 Gm27322-201ENSMUST00000184007 104 ntBASIC27.71■■■□□ 2.03
Spg11Q3UHA3 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Spg11Q3UHA3 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Spg11Q3UHA3 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.66■■■□□ 2.02
Spg11Q3UHA3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC27.62■■■□□ 2.01
Spg11Q3UHA3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Spg11Q3UHA3 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.59■■■□□ 2.01
Spg11Q3UHA3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC27.56■■■□□ 2
Spg11Q3UHA3 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.54■■■□□ 2
Spg11Q3UHA3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC27.52■■■□□ 2
Spg11Q3UHA3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Spg11Q3UHA3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
Spg11Q3UHA3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Spg11Q3UHA3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms