RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Defa30E9QPZ2 93 aa6.1□□□□□ -1.43
Trim39-201ENSMUST00000042717 Csdc2Q91YQ3 154 aa6.1□□□□□ -1.43
Trim39-201ENSMUST00000042717 Hspb8Q9JK92 196 aa6.1□□□□□ -1.43
Trim39-201ENSMUST00000042717 Gm45785A0A1B0GT05 94 aa6.1□□□□□ -1.43
Trim39-201ENSMUST00000042717 Smim13E9Q942 88 aa6.1□□□□□ -1.43
Trim39-201ENSMUST00000042717 NpsP0C0P8 89 aa6.1□□□□□ -1.43
Trim39-201ENSMUST00000042717 Gm21370Q3T9V6 190 aa6.1□□□□□ -1.43
Trim39-201ENSMUST00000042717 Cks1brtQ3UNC9 96 aa6.1□□□□□ -1.43
Trim39-201ENSMUST00000042717 BC025920Q3US60 128 aa6.1□□□□□ -1.43
Trim39-201ENSMUST00000042717 Dnah6E9Q0B6 4144 aa6.09□□□□□ -1.43
Trim39-201ENSMUST00000042717 Prh1P05142 261 aa6.09□□□□□ -1.43
Trim39-201ENSMUST00000042717 Wfdc21Q8BTE6 63 aa6.09□□□□□ -1.43
Trim39-201ENSMUST00000042717 Gm17472A0A075B683 117 aa6.09□□□□□ -1.44
Trim39-201ENSMUST00000042717 Trav13n-1A0A0G2JEU8 110 aa6.09□□□□□ -1.44
Trim39-201ENSMUST00000042717 Smim20D3Z7Q2 69 aa6.09□□□□□ -1.44
Trim39-201ENSMUST00000042717 Ighv1-72P01751 139 aa6.09□□□□□ -1.44
Trim39-201ENSMUST00000042717 Defa6P50704 93 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 Dmrt3Q80WT2 476 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 RetnQ99P87 114 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 Ifitm1Q9D103 106 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 Dnah14A0A140LIJ4 4489 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm28539A0A087WSL9 92 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 Spink4O35679 86 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 CrxO54751 299 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 P03985 172 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 Timm17aQ9Z0V8 171 aa6.08□□□□□ -1.44
Trim39-201ENSMUST00000042717 Igkv4-61A0A0G2JH00 117 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Hrct1Q9D6B9 109 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Ighv1-11A0A0A6YWI9 117 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Igkv1-99F6XWB2 120 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Fam240aJ3QNP9 97 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Ifitm10Q8BR26 201 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Atp6v0e2Q91XE7 81 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm10542F6XDR3 90 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm10772F7AIG4 85 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 P01811 117 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm21748Q3UE70 102 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Smr3aQ61900 147 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Ndufc2Q9CQ54 120 aa6.07□□□□□ -1.44
Trim39-201ENSMUST00000042717 Igkv4-53A0A0G2JFC6 119 aa6.06□□□□□ -1.44
Trim39-201ENSMUST00000042717 Trbv13-2A0A140T8N6 113 aa6.06□□□□□ -1.44
Trim39-201ENSMUST00000042717 Cox7cP17665 63 aa6.06□□□□□ -1.44
Trim39-201ENSMUST00000042717 Rpl24Q8BP67 157 aaKnown RBP6.06□□□□□ -1.44
Trim39-201ENSMUST00000042717 Chac1Q8R3J5 223 aa6.06□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm10604Q3V0X7 143 aa6.06□□□□□ -1.44
Trim39-201ENSMUST00000042717 Igkv4-79A0A075B5L8 119 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 BC107364E9Q5A2 140 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 Defa9P50707 93 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 Plac8l1Q08EJ0 177 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 B9d2Q3UK10 175 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 Mustn1Q99JI1 82 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 Tm4sf20Q9CQY8 226 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 Defa13P50711 93 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm9936Q8C864 160 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 Ovol2Q8CIV7 274 aa6.05□□□□□ -1.44
Trim39-201ENSMUST00000042717 Igkv8-34A0A0G2JDU0 121 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm9508A0A1W2P7W0 230 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 CrygaP04345 174 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm9747Q810H1 104 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 Atxn7l1Q9CZ05 146 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gnb1lQ9EQ15 326 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 Cryba4Q9JJV0 196 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm17349F7BGH6 99 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 Foxi2Q3I5G5 311 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 Cfap126Q6P8X9 189 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 Mpv17l2Q8VIK2 200 aa6.04□□□□□ -1.44
Trim39-201ENSMUST00000042717 1810062G17RikG3X8Y2 129 aa6.03□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm4707V9GXN5 68 aa6.03□□□□□ -1.44
Trim39-201ENSMUST00000042717 Ighv8-5A0A0A6YY60 119 aa6.03□□□□□ -1.44
Trim39-201ENSMUST00000042717 Cdc42se2Q8BGH7 84 aa6.03□□□□□ -1.44
Trim39-201ENSMUST00000042717 Tm2d2Q8R0I4 213 aa6.03□□□□□ -1.44
Trim39-201ENSMUST00000042717 HilpdaQ9JLS0 64 aa6.03□□□□□ -1.44
Trim39-201ENSMUST00000042717 Kmt2aP55200 3966 aa6.03□□□□□ -1.44
Trim39-201ENSMUST00000042717 Gm42674D3YUT9 64 aa6.02□□□□□ -1.44
Trim39-201ENSMUST00000042717 Slamf6Q9ET39 351 aa6.02□□□□□ -1.44
Trim39-201ENSMUST00000042717 Ighv2-6-8A0A0A6YWY9 116 aa6.02□□□□□ -1.45
Trim39-201ENSMUST00000042717 BatfO35284 125 aa6.02□□□□□ -1.45
Trim39-201ENSMUST00000042717 Eif4ebp1Q60876 117 aa6.02□□□□□ -1.45
Trim39-201ENSMUST00000042717 FasnP19096 2504 aaKnown RBP6.02□□□□□ -1.45
Trim39-201ENSMUST00000042717 Ighv8-11A0A075B5X4 119 aa6.02□□□□□ -1.45
Trim39-201ENSMUST00000042717 Ndufa1O35683 70 aa6.02□□□□□ -1.45
Trim39-201ENSMUST00000042717 PolP10400 120 aa6.02□□□□□ -1.45
Trim39-201ENSMUST00000042717 Klk9Q32M27 251 aa6.02□□□□□ -1.45
Trim39-201ENSMUST00000042717 Xlr5cQ9JJR2 179 aa6.02□□□□□ -1.45
Trim39-201ENSMUST00000042717 LeprotO89013 131 aa6.01□□□□□ -1.45
Trim39-201ENSMUST00000042717 TnxbO35452 4006 aa6.01□□□□□ -1.45
Trim39-201ENSMUST00000042717 Trav13-4-dv7A0A075B6C2 110 aa6.01□□□□□ -1.45
Trim39-201ENSMUST00000042717 P01837 106 aa6.01□□□□□ -1.45
Trim39-201ENSMUST00000042717 Ube2d1P61080 147 aaKnown RBP6.01□□□□□ -1.45
Trim39-201ENSMUST00000042717 Q9DAQ5 155 aa6.01□□□□□ -1.45
Trim39-201ENSMUST00000042717 3110070M22RikQ9DAQ7 118 aa6.01□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm20730A0A075B5J6 119 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Muc6Q80T03 2850 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Trav13-1A0A075B644 110 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Iglc1A0A0G2JE99 106 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Igkv3-9A0A140T8P4 119 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm29289A0A087WPY7 166 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm4064A0A087WR82 380 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm35549A0A0N4SUS7 141 aa6□□□□□ -1.45
Trim39-201ENSMUST00000042717 Gm10352B2RWR6 380 aa6□□□□□ -1.45
Retrieved 100 of 22,080 RNA–protein pairs in 148.1 ms