RNA–Protein interactions for RNA: ENSMUST00000017153.3

Sdc4-201, Transcript of Syndecan-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc4, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4-201ENSMUST00000017153 P01812 117 aa9.05□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Svep1A2AVA0 3567 aa9.05□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Sptan1P16546 2472 aaKnown RBP9.05□□□□□ -0.96
Sdc4-201ENSMUST00000017153 LhbO09108 141 aa9.05□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Dad1P61804 113 aa9.05□□□□□ -0.96
Sdc4-201ENSMUST00000017153 3110018I06RikQ9CXS0 120 aa9.05□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Col6a4A2AX52 2309 aa9.04□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Gm7075D3Z497 112 aa9.04□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Ppp1r32Q148A4 427 aa9.04□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Cd99Q8VCN6 175 aa9.04□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Krtap26-1Q9D7N2 215 aa9.04□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Armcx4E9PWM3 2356 aa9.03□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Krtap16-1A2A5X5 502 aa9.03□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Gm5153P01627 120 aa9.03□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Gm9936Q8C864 160 aa9.03□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Iah1Q9DB29 249 aa9.03□□□□□ -0.96
Sdc4-201ENSMUST00000017153 MsmbO08540 113 aa9.03□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Ndufb4Q9CQC7 129 aa9.03□□□□□ -0.96
Sdc4-201ENSMUST00000017153 Trbv13-1A0A0B4J1P8 112 aa9.02□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Rpl36-ps4A0A140T8U4 117 aa9.02□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gm17455G3UW87 128 aa9.02□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Ighv1-12A0A0A6YXJ9 117 aa9.02□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gm7102J3QQ10 178 aa9.01□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Prr3Q811B5 190 aaKnown RBP9.01□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Trav13d-1A0A075B606 110 aa9□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Trav13n-1A0A0G2JEU8 110 aa9□□□□□ -0.97
Sdc4-201ENSMUST00000017153 SrarpQ3ULG3 163 aa9□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gm26620Q9CY65 116 aa9□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Pglyrp1O88593 182 aa9□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Xcl1P47993 114 aa9□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Triap1Q9D8Z2 76 aa9□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Igkv4-62A0A0G2JDW9 117 aa8.99□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gm10553J3QPF1 123 aa8.99□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Polr2kQ63871 58 aa8.99□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Wfdc15aQ8BH89 80 aa8.99□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gm42674D3YUT9 64 aa8.98□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gphb5Q812B2 130 aa8.98□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Morn5Q9DAI9 170 aa8.98□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Trav7-6A0A075B640 112 aa8.98□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Defa27F2Z403 93 aa8.98□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Rbm3O89086 153 aaKnown RBP8.98□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Rpl39P62892 51 aa8.98□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Igkv2-137A0A0B4J1H6 120 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gm20499D3Z4G5 72 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gm933J3QPC1 141 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Ccl21aP84444 133 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Ccl21bP86792 133 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Ccl21cP86793 133 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gm29423A0A087WRM1 55 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Gm17732E9Q5I2 61 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Ly6gP35461 111 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 BC025920Q3US60 128 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Lyzl4Q9D925 145 aa8.97□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Ptpn13Q64512 2453 aa8.96□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Csmd2V9GX34 3611 aa8.96□□□□□ -0.97
Sdc4-201ENSMUST00000017153 Znf414Q9DCK4 299 aa8.96□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Itpr3P70227 2670 aa8.96□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Trav14-1A0A0G2JF94 121 aa8.95□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Qrich2A0A140LIY9 2337 aa8.95□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Ighv2-3A0A075B696 115 aa8.95□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Prpf8Q99PV0 2335 aaKnown RBP8.94□□□□□ -0.98
Sdc4-201ENSMUST00000017153 OtoglF7A4A7 2325 aa8.94□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Vpreb2P13373 142 aa8.94□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Foxi2Q3I5G5 311 aa8.94□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Ighv2-7A0A075B5Q8 116 aa8.93□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Trav4-3A0A0B4J1K1 110 aa8.93□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Q5BN45 167 aa8.93□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Defb47Q30KN1 79 aa8.93□□□□□ -0.98
Sdc4-201ENSMUST00000017153 B230307C23RikQ8BLB2 64 aa8.93□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Trav9-2A0A075B647 113 aa8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Trav11A0A0B4J1J9 114 aa8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Trav9-4A0A0B4J1K2 113 aa8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 AI854703Q8BIN3 203 aa8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Srsf12Q8C8K3 266 aa8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 4933415A04RikQ9D443 101 aa8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Spry2Q9QXV8 315 aa8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Ankhd1E9PUR0 2548 aaKnown RBP8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Gm17521F6QAC8 156 aa8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Cystm1Q8K353 104 aa8.92□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Spag11Q8K4N2 71 aa8.91□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Dynlrb2Q9DAJ5 96 aa8.91□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Timm17aQ9Z0V8 171 aa8.91□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Prelid3aQ8VE85 172 aa8.91□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Gm29666A0A087WQ99 126 aa8.9□□□□□ -0.98
Sdc4-201ENSMUST00000017153 1810032O08RikE9PZV8 113 aa8.9□□□□□ -0.98
Sdc4-201ENSMUST00000017153 FcorP0DJI6 106 aa8.9□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Gm9195A0A140LHT4 2805 aa8.9□□□□□ -0.98
Sdc4-201ENSMUST00000017153 Ighv1-5A0A0A6YWG2 117 aa8.9□□□□□ -0.99
Sdc4-201ENSMUST00000017153 C920008G01RikA0A0B4J1N1 112 aa8.9□□□□□ -0.99
Sdc4-201ENSMUST00000017153 CnbpP53996 178 aaKnown RBP8.9□□□□□ -0.99
Sdc4-201ENSMUST00000017153 Ifitm10Q8BR26 201 aa8.9□□□□□ -0.99
Sdc4-201ENSMUST00000017153 Higd1aQ9JLR9 95 aa8.9□□□□□ -0.99
Sdc4-201ENSMUST00000017153 Gm21887J3QQ04 176 aa8.89□□□□□ -0.99
Sdc4-201ENSMUST00000017153 P84751 237 aa8.89□□□□□ -0.99
Sdc4-201ENSMUST00000017153 Gm10643Q3URG9 111 aa8.89□□□□□ -0.99
Sdc4-201ENSMUST00000017153 Sorl1O88307 2215 aaKnown RBP8.89□□□□□ -0.99
Sdc4-201ENSMUST00000017153 Igkv3-10A0A0G2JGN0 119 aa8.88□□□□□ -0.99
Sdc4-201ENSMUST00000017153 A930009A15RikG3UYI6 118 aa8.88□□□□□ -0.99
Sdc4-201ENSMUST00000017153 Ube2d4D3YUH6 135 aa8.88□□□□□ -0.99
Sdc4-201ENSMUST00000017153 Krtap27-1E9PX37 202 aa8.88□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 84.6 ms