RNA–Protein interactions for RNA: ENSMUST00000017153.3

Sdc4-201, Transcript of Syndecan-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc4, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4-201ENSMUST00000017153 NischQ80TM9 1593 aa23.36■■□□□ 1.33
Sdc4-201ENSMUST00000017153 Gm35339A0A140LHH9 1649 aa23.32■■□□□ 1.32
Sdc4-201ENSMUST00000017153 Abcc9P70170 1546 aa22.71■■□□□ 1.23
Sdc4-201ENSMUST00000017153 Abcc8B2RUS7 1588 aa22.35■■□□□ 1.17
Sdc4-201ENSMUST00000017153 Rhox8Q6VSS7 320 aa21.54■■□□□ 1.04
Sdc4-201ENSMUST00000017153 Rtl1Q7M732 1744 aa21.4■■□□□ 1.02
Sdc4-201ENSMUST00000017153 Ccdc180J3QNE4 1664 aa21.03■□□□□ 0.96
Sdc4-201ENSMUST00000017153 ScribQ80U72 1612 aa20.98■□□□□ 0.95
Sdc4-201ENSMUST00000017153 Dcaf1Q80TR8 1506 aa20.95■□□□□ 0.94
Sdc4-201ENSMUST00000017153 DiexfQ8BTT6 772 aaKnown RBP20.86■□□□□ 0.93
Sdc4-201ENSMUST00000017153 Zcchc6Q5BLK4 1491 aaKnown RBP20.6■□□□□ 0.89
Sdc4-201ENSMUST00000017153 NacadQ5SWP3 1504 aa20.55■□□□□ 0.88
Sdc4-201ENSMUST00000017153 Kdm5dQ62240 1548 aa20.53■□□□□ 0.88
Sdc4-201ENSMUST00000017153 Rpgrip1Q9EPQ2 1331 aa20.5■□□□□ 0.87
Sdc4-201ENSMUST00000017153 Rb1cc1Q9ESK9 1588 aa20.41■□□□□ 0.86
Sdc4-201ENSMUST00000017153 Baz1aO88379 1555 aa20.23■□□□□ 0.83
Sdc4-201ENSMUST00000017153 Myt1Q8CFC2 1127 aa20.21■□□□□ 0.83
Sdc4-201ENSMUST00000017153 Pcgf6Q99NA9 353 aa20.17■□□□□ 0.82
Sdc4-201ENSMUST00000017153 Crybg2B7ZCC2 1516 aa20.12■□□□□ 0.81
Sdc4-201ENSMUST00000017153 Amer1Q7TS75 1132 aa20.12■□□□□ 0.81
Sdc4-201ENSMUST00000017153 Sycp2Q9CUU3 1500 aa20.08■□□□□ 0.81
Sdc4-201ENSMUST00000017153 HrcG5E8J6 738 aa19.99■□□□□ 0.79
Sdc4-201ENSMUST00000017153 Ccdc136Q3TVA9 1136 aa19.95■□□□□ 0.78
Sdc4-201ENSMUST00000017153 Bcl11aQ9QYE3 773 aa19.94■□□□□ 0.78
Sdc4-201ENSMUST00000017153 CenpbP27790 599 aa19.87■□□□□ 0.77
Sdc4-201ENSMUST00000017153 CatipB9EKE5 520 aa19.8■□□□□ 0.76
Sdc4-201ENSMUST00000017153 Plppr3Q7TPB0 716 aa19.79■□□□□ 0.76
Sdc4-201ENSMUST00000017153 Ttbk1Q6PCN3 1308 aa19.73■□□□□ 0.75
Sdc4-201ENSMUST00000017153 Acin1Q9JIX8 1338 aaKnown RBP19.72■□□□□ 0.75
Sdc4-201ENSMUST00000017153 Smarca2Q6DIC0 1577 aa19.71■□□□□ 0.75
Sdc4-201ENSMUST00000017153 Ube2uB1AUC4 352 aa19.69■□□□□ 0.74
Sdc4-201ENSMUST00000017153 BicraF8VPZ9 1578 aa19.59■□□□□ 0.73
Sdc4-201ENSMUST00000017153 Ehmt2Q9Z148 1263 aaKnown RBP19.58■□□□□ 0.72
Sdc4-201ENSMUST00000017153 Trim41Q5NCC3 630 aa19.57■□□□□ 0.72
Sdc4-201ENSMUST00000017153 PrkcshO08795 521 aa19.53■□□□□ 0.72
Sdc4-201ENSMUST00000017153 Cep164Q5DU05 1446 aa19.38■□□□□ 0.69
Sdc4-201ENSMUST00000017153 Las1lA2BE28 776 aaKnown RBP19.35■□□□□ 0.69
Sdc4-201ENSMUST00000017153 Brd4Q9ESU6 1400 aaKnown RBP19.27■□□□□ 0.67
Sdc4-201ENSMUST00000017153 Cecr2E9Q2Z1 1453 aa19.23■□□□□ 0.67
Sdc4-201ENSMUST00000017153 Smarca4Q3TKT4 1613 aaKnown RBP19.11■□□□□ 0.65
Sdc4-201ENSMUST00000017153 Rsf1E9PWW9 1441 aaKnown RBP19.09■□□□□ 0.65
Sdc4-201ENSMUST00000017153 Cngb1E1AZ71 1325 aa19.08■□□□□ 0.65
Sdc4-201ENSMUST00000017153 Chic1Q8CBW7 227 aa19.04■□□□□ 0.64
Sdc4-201ENSMUST00000017153 CftrP26361 1476 aa19.02■□□□□ 0.64
Sdc4-201ENSMUST00000017153 Synj1Q8CHC4 1574 aa19.02■□□□□ 0.64
Sdc4-201ENSMUST00000017153 Golga3P55937 1487 aa19■□□□□ 0.63
Sdc4-201ENSMUST00000017153 Pds5bQ4VA53 1446 aaKnown RBP19■□□□□ 0.63
Sdc4-201ENSMUST00000017153 Cttnbp2B9EJA2 1648 aa18.98■□□□□ 0.63
Sdc4-201ENSMUST00000017153 Atad2bE9Q166 1460 aaKnown RBP18.97■□□□□ 0.63
Sdc4-201ENSMUST00000017153 1700123L14RikQ3V2K7 440 aa18.95■□□□□ 0.62
Sdc4-201ENSMUST00000017153 Ccdc88bQ4QRL3 1481 aa18.94■□□□□ 0.62
Sdc4-201ENSMUST00000017153 Gab3Q8BSM5 595 aa18.91■□□□□ 0.62
Sdc4-201ENSMUST00000017153 Iqgap2Q3UQ44 1575 aa18.86■□□□□ 0.61
Sdc4-201ENSMUST00000017153 ArxO35085 564 aa18.78■□□□□ 0.6
Sdc4-201ENSMUST00000017153 Top2bQ64511 1612 aa18.77■□□□□ 0.6
Sdc4-201ENSMUST00000017153 Gtf3c5Q8R2T8 520 aa18.77■□□□□ 0.59
Sdc4-201ENSMUST00000017153 Neurod1Q60867 357 aa18.76■□□□□ 0.59
Sdc4-201ENSMUST00000017153 Pknox2Q8BG99 474 aa18.75■□□□□ 0.59
Sdc4-201ENSMUST00000017153 Esf1Q3V1V3 845 aaKnown RBP18.74■□□□□ 0.59
Sdc4-201ENSMUST00000017153 Aplp2Q06335 707 aa18.63■□□□□ 0.57
Sdc4-201ENSMUST00000017153 Supt5hO55201 1082 aaKnown RBP18.63■□□□□ 0.57
Sdc4-201ENSMUST00000017153 Ercc6F8VPZ5 1481 aa18.6■□□□□ 0.57
Sdc4-201ENSMUST00000017153 Cc2d2aQ8CFW7 1633 aa18.59■□□□□ 0.57
Sdc4-201ENSMUST00000017153 Wdr62Q3U3T8 1523 aa18.58■□□□□ 0.57
Sdc4-201ENSMUST00000017153 BccipQ9CWI3 316 aa18.58■□□□□ 0.56
Sdc4-201ENSMUST00000017153 Gm38655A0A286YDK6 273 aa18.57■□□□□ 0.56
Sdc4-201ENSMUST00000017153 Mier1Q5UAK0 511 aa18.55■□□□□ 0.56
Sdc4-201ENSMUST00000017153 Frmpd1A2AKB4 1549 aa18.54■□□□□ 0.56
Sdc4-201ENSMUST00000017153 NefmP08553 848 aa18.54■□□□□ 0.56
Sdc4-201ENSMUST00000017153 Fmn1Q05860 1466 aa18.49■□□□□ 0.55
Sdc4-201ENSMUST00000017153 Fgd1P52734 960 aa18.47■□□□□ 0.55
Sdc4-201ENSMUST00000017153 Rapgef2Q8CHG7 1496 aa18.47■□□□□ 0.55
Sdc4-201ENSMUST00000017153 Thoc2B1AZI6 1594 aaKnown RBP18.44■□□□□ 0.54
Sdc4-201ENSMUST00000017153 Top2aQ01320 1528 aaKnown RBP18.43■□□□□ 0.54
Sdc4-201ENSMUST00000017153 Ifnlr1Q8CGK5 535 aa18.42■□□□□ 0.54
Sdc4-201ENSMUST00000017153 Zeb1Q64318 1117 aa18.41■□□□□ 0.54
Sdc4-201ENSMUST00000017153 NrdcQ8BHG1 1161 aa18.41■□□□□ 0.54
Sdc4-201ENSMUST00000017153 TimelessQ9R1X4 1197 aa18.4■□□□□ 0.54
Sdc4-201ENSMUST00000017153 TnnQ80Z71 1560 aa18.33■□□□□ 0.52
Sdc4-201ENSMUST00000017153 Eif5bQ05D44 1216 aaKnown RBP18.32■□□□□ 0.52
Sdc4-201ENSMUST00000017153 Phldb1Q6PDH0 1371 aaKnown RBP18.31■□□□□ 0.52
Sdc4-201ENSMUST00000017153 Cep162Q6ZQ06 1403 aa18.3■□□□□ 0.52
Sdc4-201ENSMUST00000017153 Lamc3Q9R0B6 1581 aa18.29■□□□□ 0.52
Sdc4-201ENSMUST00000017153 UbtfP25976 765 aaKnown RBP18.26■□□□□ 0.51
Sdc4-201ENSMUST00000017153 Fam135aQ6NS59 1506 aa18.24■□□□□ 0.51
Sdc4-201ENSMUST00000017153 Anks4bQ8K3X6 423 aa18.23■□□□□ 0.51
Sdc4-201ENSMUST00000017153 Unc13aQ4KUS2 1712 aa18.22■□□□□ 0.51
Sdc4-201ENSMUST00000017153 Baz1bQ9Z277 1479 aa18.21■□□□□ 0.51
Sdc4-201ENSMUST00000017153 Myt1lP97500 1187 aa18.2■□□□□ 0.5
Sdc4-201ENSMUST00000017153 Csrnp3P59055 597 aa18.18■□□□□ 0.5
Sdc4-201ENSMUST00000017153 Rsph4aQ8BYM7 716 aa18.18■□□□□ 0.5
Sdc4-201ENSMUST00000017153 Sall2Q9QX96 1004 aa18.17■□□□□ 0.5
Sdc4-201ENSMUST00000017153 Kif15Q6P9L6 1387 aa18.17■□□□□ 0.5
Sdc4-201ENSMUST00000017153 Eif4g1Q6NZJ6 1600 aaKnown RBP18.15■□□□□ 0.5
Sdc4-201ENSMUST00000017153 Npm2Q80W85 207 aa18.14■□□□□ 0.5
Sdc4-201ENSMUST00000017153 Scaf1Q5U4C3 1256 aaKnown RBP18.14■□□□□ 0.49
Sdc4-201ENSMUST00000017153 Znf316Q6PGE4 1016 aa18.06■□□□□ 0.48
Sdc4-201ENSMUST00000017153 Hdac5Q9Z2V6 1113 aa18.06■□□□□ 0.48
Sdc4-201ENSMUST00000017153 Clip1Q922J3 1391 aa18.05■□□□□ 0.48
Sdc4-201ENSMUST00000017153 Ubl4bQ9CQ84 188 aa18.05■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 83.7 ms