RNA–Protein interactions for RNA: ENSMUST00000078505.13

Rtn1-202, Transcript of Reticulon-1, mousemouse

TSL 1 (best) BASIC

Gene Rtn1, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1-202ENSMUST00000078505 Trbv16A0A0B4J1H3 115 aa11.2□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Igkv4-62A0A0G2JDW9 117 aa11.2□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Ifi27l2aQ8R412 90 aa11.2□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Nop10Q9CQS2 64 aa11.2□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Cox7cP17665 63 aa11.2□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Rnf183Q8QZS5 190 aa11.2□□□□□ -0.62
Rtn1-202ENSMUST00000078505 FlnbQ80X90 2602 aaKnown RBP11.19□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Ccl25O35903 144 aa11.19□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Rnase1P00683 149 aa11.19□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Bles03Q8VD62 251 aa11.19□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Gm4861Q8C5A4 106 aa11.19□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Dmrt3Q80WT2 476 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Il1f10Q8R459 152 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Pdzd2E9Q1M1 2796 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Gm10322F7D7I4 111 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Sh2d1aO88890 126 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Tspan13Q9D8C2 204 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Mast4Q811L6 2618 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Gm29423A0A087WRM1 55 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Trav13n-1A0A0G2JEU8 110 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Q9D8Q6 235 aa11.18□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Gm3233E9Q2H5 230 aa11.17□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Gm6812B1AXU1 112 aa11.16□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Mfap4Q9D1H9 257 aa11.16□□□□□ -0.62
Rtn1-202ENSMUST00000078505 LeprotO89013 131 aa11.16□□□□□ -0.62
Rtn1-202ENSMUST00000078505 4930415O20RikQ8CDT5 131 aa11.16□□□□□ -0.62
Rtn1-202ENSMUST00000078505 AtrQ9JKK8 2635 aa11.16□□□□□ -0.62
Rtn1-202ENSMUST00000078505 ColqO35348 457 aa11.16□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Fam240bJ3QMB3 78 aa11.15□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Gm10295Q8CCF3 114 aa11.15□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Spata25Q9DA57 226 aa11.15□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Timm17aQ9Z0V8 171 aa11.15□□□□□ -0.62
Rtn1-202ENSMUST00000078505 Tomm7Q9D173 55 aa11.15□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Trav7d-3Q5R1I1 112 aa11.14□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Gm45717A0A1B0GT68 152 aa11.14□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Gm3443F7CCV5 94 aa11.14□□□□□ -0.63
Rtn1-202ENSMUST00000078505 AI854703Q8BIN3 203 aa11.14□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Ighv1-85A0A075B5Y6 117 aa11.13□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Ighv1-49A0A0A6YWX2 117 aa11.13□□□□□ -0.63
Rtn1-202ENSMUST00000078505 GalmQ8K157 342 aa11.13□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Fam216aQ9DB54 251 aa11.13□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Cox11Q6P8I6 275 aa11.13□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Ociad2Q9D8W7 154 aa11.13□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Lyrm7Q9DA03 104 aa11.13□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Crlf1Q9JM58 425 aa11.13□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Znf740Q6NZQ6 180 aa11.12□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Cox7a1P56392 80 aa11.12□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Fam110dQ80X91 271 aa11.12□□□□□ -0.63
Rtn1-202ENSMUST00000078505 PtprqP0C5E4 2300 aa11.11□□□□□ -0.63
Rtn1-202ENSMUST00000078505 P01729 129 aa11.11□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Dand5Q76LW6 185 aa11.11□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Cfap126Q6P8X9 189 aa11.11□□□□□ -0.63
Rtn1-202ENSMUST00000078505 4930564D02RikQ9D4S4 103 aa11.11□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Igkv4-78A0A0A6YYE5 119 aa11.1□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Gm8439G3UWA7 96 aa11.1□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Helz2E9QAM5 2947 aaKnown RBP11.1□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Psmb8P28063 276 aa11.1□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Pfn2Q9JJV2 140 aa11.1□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Tmem238A9JSM3 176 aa11.09□□□□□ -0.63
Rtn1-202ENSMUST00000078505 S100a8P27005 89 aa11.09□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Tac4Q99N14 128 aa11.09□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Crip2Q9DCT8 208 aaKnown RBP11.09□□□□□ -0.63
Rtn1-202ENSMUST00000078505 Trav13-4-dv7A0A075B6C2 110 aa11.08□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Bri3P28662 125 aa11.08□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Rpl36aP83882 106 aaKnown RBP11.08□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Morn5Q9DAI9 170 aa11.08□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Leap2Q91V13 76 aa11.08□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Notch1Q01705 2531 aa11.08□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Ighv1-63A0A075B5X2 117 aa11.07□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Sigmar1O55242 223 aa11.07□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Gata1P17679 413 aa11.07□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Defb45Q3V490 66 aa11.07□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Trav9d-4A0A0G2JG37 103 aa11.07□□□□□ -0.64
Rtn1-202ENSMUST00000078505 BC025920Q3US60 128 aa11.07□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Srsf12Q8C8K3 266 aa11.06□□□□□ -0.64
Rtn1-202ENSMUST00000078505 CubnQ9JLB4 3623 aa11.06□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Trav4n-4A0A075B615 110 aa11.06□□□□□ -0.64
Rtn1-202ENSMUST00000078505 BC048562Q80ZQ7 204 aa11.06□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Tcrg-C1A0A075B5Z0 172 aa11.05□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Prelid3aQ8VE85 172 aa11.05□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Atp5g1Q9CR84 136 aa11.05□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Gm10509O88255 85 aa11.04□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Rbmy1bQ60990 380 aa11.04□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Znf580Q9DB38 172 aa11.03□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Trav7-6A0A075B640 112 aa11.03□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Igkv4-68A0A0B4J1I7 117 aa11.03□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Ube2d1P61080 147 aaKnown RBP11.03□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Q9DAQ5 155 aa11.03□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Tex15F8VPN2 2785 aa11.03□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Defa20Q45VN2 95 aa11.02□□□□□ -0.64
Rtn1-202ENSMUST00000078505 SpinklQ8CEK3 90 aa11.02□□□□□ -0.64
Rtn1-202ENSMUST00000078505 Gm10767Q3TQP0 103 aa11.02□□□□□ -0.65
Rtn1-202ENSMUST00000078505 Igkv4-79A0A075B5L8 119 aa11.01□□□□□ -0.65
Rtn1-202ENSMUST00000078505 B230359F08RikA0A0B4J1K3 109 aa11.01□□□□□ -0.65
Rtn1-202ENSMUST00000078505 Glrp1E9Q9S8 174 aa11.01□□□□□ -0.65
Rtn1-202ENSMUST00000078505 CirbpP60824 172 aaKnown RBP11.01□□□□□ -0.65
Rtn1-202ENSMUST00000078505 Q99M08 65 aa11.01□□□□□ -0.65
Rtn1-202ENSMUST00000078505 Gm10135F6TEE5 83 aa11□□□□□ -0.65
Rtn1-202ENSMUST00000078505 Krtap26-1Q9D7N2 215 aa11□□□□□ -0.65
Rtn1-202ENSMUST00000078505 Trav13d-4A0A0G2JFX3 110 aa11□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 61 ms