RNA–Protein interactions for RNA: ENSMUST00000078505.13

Rtn1-202, Transcript of Reticulon-1, mousemouse

TSL 1 (best) BASIC

Gene Rtn1, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1-202ENSMUST00000078505 NischQ80TM9 1593 aa28.22■■■□□ 2.11
Rtn1-202ENSMUST00000078505 Rhox8Q6VSS7 320 aa27.96■■■□□ 2.07
Rtn1-202ENSMUST00000078505 Abcc9P70170 1546 aa27.04■■□□□ 1.92
Rtn1-202ENSMUST00000078505 Gm35339A0A140LHH9 1649 aa26.63■■□□□ 1.85
Rtn1-202ENSMUST00000078505 Abcc8B2RUS7 1588 aa26.52■■□□□ 1.84
Rtn1-202ENSMUST00000078505 Ccdc136Q3TVA9 1136 aa25.87■■□□□ 1.73
Rtn1-202ENSMUST00000078505 Ehmt2Q9Z148 1263 aaKnown RBP25.83■■□□□ 1.73
Rtn1-202ENSMUST00000078505 Rtl1Q7M732 1744 aa25.36■■□□□ 1.65
Rtn1-202ENSMUST00000078505 Ccdc180J3QNE4 1664 aa25.35■■□□□ 1.65
Rtn1-202ENSMUST00000078505 Trim41Q5NCC3 630 aa24.94■■□□□ 1.58
Rtn1-202ENSMUST00000078505 Zcchc6Q5BLK4 1491 aaKnown RBP24.76■■□□□ 1.55
Rtn1-202ENSMUST00000078505 Rb1cc1Q9ESK9 1588 aa24.75■■□□□ 1.55
Rtn1-202ENSMUST00000078505 Cngb1E1AZ71 1325 aa24.73■■□□□ 1.55
Rtn1-202ENSMUST00000078505 Gab3Q8BSM5 595 aa24.71■■□□□ 1.55
Rtn1-202ENSMUST00000078505 Rpgrip1Q9EPQ2 1331 aa24.66■■□□□ 1.54
Rtn1-202ENSMUST00000078505 HrcG5E8J6 738 aa24.61■■□□□ 1.53
Rtn1-202ENSMUST00000078505 ScribQ80U72 1612 aa24.6■■□□□ 1.53
Rtn1-202ENSMUST00000078505 Acin1Q9JIX8 1338 aaKnown RBP24.58■■□□□ 1.52
Rtn1-202ENSMUST00000078505 Dcaf1Q80TR8 1506 aa24.5■■□□□ 1.51
Rtn1-202ENSMUST00000078505 Kdm5dQ62240 1548 aa24.42■■□□□ 1.5
Rtn1-202ENSMUST00000078505 Esf1Q3V1V3 845 aaKnown RBP24.32■■□□□ 1.48
Rtn1-202ENSMUST00000078505 Baz1aO88379 1555 aa24.26■■□□□ 1.47
Rtn1-202ENSMUST00000078505 Chic1Q8CBW7 227 aa24.14■■□□□ 1.45
Rtn1-202ENSMUST00000078505 NacadQ5SWP3 1504 aa24.12■■□□□ 1.45
Rtn1-202ENSMUST00000078505 Zeb1Q64318 1117 aa23.97■■□□□ 1.43
Rtn1-202ENSMUST00000078505 Pcgf6Q99NA9 353 aa23.9■■□□□ 1.42
Rtn1-202ENSMUST00000078505 Myt1lP97500 1187 aa23.8■■□□□ 1.4
Rtn1-202ENSMUST00000078505 Cep164Q5DU05 1446 aa23.75■■□□□ 1.39
Rtn1-202ENSMUST00000078505 Supt5hO55201 1082 aaKnown RBP23.71■■□□□ 1.39
Rtn1-202ENSMUST00000078505 Rsf1E9PWW9 1441 aaKnown RBP23.67■■□□□ 1.38
Rtn1-202ENSMUST00000078505 UbtfP25976 765 aaKnown RBP23.66■■□□□ 1.38
Rtn1-202ENSMUST00000078505 Cecr2E9Q2Z1 1453 aa23.6■■□□□ 1.37
Rtn1-202ENSMUST00000078505 Smarca2Q6DIC0 1577 aa23.6■■□□□ 1.37
Rtn1-202ENSMUST00000078505 Sycp2Q9CUU3 1500 aa23.55■■□□□ 1.36
Rtn1-202ENSMUST00000078505 Brd4Q9ESU6 1400 aaKnown RBP23.54■■□□□ 1.36
Rtn1-202ENSMUST00000078505 Npm2Q80W85 207 aa23.53■■□□□ 1.36
Rtn1-202ENSMUST00000078505 Mier1Q5UAK0 511 aa23.52■■□□□ 1.36
Rtn1-202ENSMUST00000078505 Ccdc88bQ4QRL3 1481 aa23.52■■□□□ 1.36
Rtn1-202ENSMUST00000078505 Ppargc1bQ8VHJ7 1014 aa23.41■■□□□ 1.34
Rtn1-202ENSMUST00000078505 Wdr66E9Q743 1299 aa23.37■■□□□ 1.33
Rtn1-202ENSMUST00000078505 Il27Q8K3I6 234 aa23.34■■□□□ 1.33
Rtn1-202ENSMUST00000078505 Golga3P55937 1487 aa23.32■■□□□ 1.32
Rtn1-202ENSMUST00000078505 Crybg2B7ZCC2 1516 aa23.31■■□□□ 1.32
Rtn1-202ENSMUST00000078505 Synj1Q8CHC4 1574 aa23.22■■□□□ 1.31
Rtn1-202ENSMUST00000078505 NefmP08553 848 aa23.18■■□□□ 1.3
Rtn1-202ENSMUST00000078505 Ap3b1Q9Z1T1 1105 aa23.17■■□□□ 1.3
Rtn1-202ENSMUST00000078505 Plekhg3Q4VAC9 1341 aa23.13■■□□□ 1.29
Rtn1-202ENSMUST00000078505 Las1lA2BE28 776 aaKnown RBP23.06■■□□□ 1.28
Rtn1-202ENSMUST00000078505 CftrP26361 1476 aa23.05■■□□□ 1.28
Rtn1-202ENSMUST00000078505 Sall2Q9QX96 1004 aa23.05■■□□□ 1.28
Rtn1-202ENSMUST00000078505 BicraF8VPZ9 1578 aa22.98■■□□□ 1.27
Rtn1-202ENSMUST00000078505 Neurod1Q60867 357 aa22.95■■□□□ 1.27
Rtn1-202ENSMUST00000078505 Aebp2Q9Z248 504 aaKnown RBP22.82■■□□□ 1.24
Rtn1-202ENSMUST00000078505 Eid3Q3V124 375 aa22.76■■□□□ 1.23
Rtn1-202ENSMUST00000078505 Clip1Q922J3 1391 aa22.73■■□□□ 1.23
Rtn1-202ENSMUST00000078505 Cc2d2aQ8CFW7 1633 aa22.71■■□□□ 1.23
Rtn1-202ENSMUST00000078505 Rapgef2Q8CHG7 1496 aa22.64■■□□□ 1.21
Rtn1-202ENSMUST00000078505 Lmod2Q3UHZ5 550 aa22.63■■□□□ 1.21
Rtn1-202ENSMUST00000078505 Cttnbp2B9EJA2 1648 aa22.62■■□□□ 1.21
Rtn1-202ENSMUST00000078505 Smarca4Q3TKT4 1613 aaKnown RBP22.61■■□□□ 1.21
Rtn1-202ENSMUST00000078505 TonslQ6NZL6 1363 aa22.61■■□□□ 1.21
Rtn1-202ENSMUST00000078505 Cep162Q6ZQ06 1403 aa22.6■■□□□ 1.21
Rtn1-202ENSMUST00000078505 Fam50aQ9WV03 339 aaKnown RBP22.57■■□□□ 1.2
Rtn1-202ENSMUST00000078505 Mapk8ip2Q9ERE9 830 aa22.56■■□□□ 1.2
Rtn1-202ENSMUST00000078505 Fmn1Q05860 1466 aa22.54■■□□□ 1.2
Rtn1-202ENSMUST00000078505 Ube2uB1AUC4 352 aa22.52■■□□□ 1.2
Rtn1-202ENSMUST00000078505 Nop58Q6DFW4 536 aaKnown RBP22.48■■□□□ 1.19
Rtn1-202ENSMUST00000078505 Top2bQ64511 1612 aa22.48■■□□□ 1.19
Rtn1-202ENSMUST00000078505 Cdk11bP24788 784 aaKnown RBP22.44■■□□□ 1.18
Rtn1-202ENSMUST00000078505 Kif15Q6P9L6 1387 aa22.44■■□□□ 1.18
Rtn1-202ENSMUST00000078505 Iqgap2Q3UQ44 1575 aa22.4■■□□□ 1.18
Rtn1-202ENSMUST00000078505 ClspnQ80YR7 1315 aa22.36■■□□□ 1.17
Rtn1-202ENSMUST00000078505 Gm38655A0A286YDK6 273 aa22.36■■□□□ 1.17
Rtn1-202ENSMUST00000078505 Csrnp3P59055 597 aa22.35■■□□□ 1.17
Rtn1-202ENSMUST00000078505 Npm1Q61937 292 aaKnown RBP22.33■■□□□ 1.16
Rtn1-202ENSMUST00000078505 Setd5Q5XJV7 1441 aa22.31■■□□□ 1.16
Rtn1-202ENSMUST00000078505 Top2aQ01320 1528 aaKnown RBP22.3■■□□□ 1.16
Rtn1-202ENSMUST00000078505 Ubl4bQ9CQ84 188 aa22.27■■□□□ 1.16
Rtn1-202ENSMUST00000078505 Atad2bE9Q166 1460 aaKnown RBP22.25■■□□□ 1.15
Rtn1-202ENSMUST00000078505 BlmO88700 1416 aa22.21■■□□□ 1.15
Rtn1-202ENSMUST00000078505 PtprkP35822 1457 aa22.2■■□□□ 1.14
Rtn1-202ENSMUST00000078505 NclP09405 707 aaKnown RBP22.19■■□□□ 1.14
Rtn1-202ENSMUST00000078505 Pds5bQ4VA53 1446 aaKnown RBP22.19■■□□□ 1.14
Rtn1-202ENSMUST00000078505 Eea1Q8BL66 1411 aa22.15■■□□□ 1.14
Rtn1-202ENSMUST00000078505 Slc24a1Q91WD8 1130 aa22.14■■□□□ 1.13
Rtn1-202ENSMUST00000078505 Anks4bQ8K3X6 423 aa22.1■■□□□ 1.13
Rtn1-202ENSMUST00000078505 Chic2Q9D9G3 165 aa22.04■■□□□ 1.12
Rtn1-202ENSMUST00000078505 Arhgap35Q91YM2 1499 aa22.03■■□□□ 1.12
Rtn1-202ENSMUST00000078505 Ercc6F8VPZ5 1481 aa22.02■■□□□ 1.12
Rtn1-202ENSMUST00000078505 Frmpd1A2AKB4 1549 aa22.02■■□□□ 1.12
Rtn1-202ENSMUST00000078505 1700123L14RikQ3V2K7 440 aa21.98■■□□□ 1.11
Rtn1-202ENSMUST00000078505 Arap1Q4LDD4 1452 aa21.95■■□□□ 1.1
Rtn1-202ENSMUST00000078505 Ccdc18Q640L5 1455 aa21.94■■□□□ 1.1
Rtn1-202ENSMUST00000078505 Baz1bQ9Z277 1479 aa21.94■■□□□ 1.1
Rtn1-202ENSMUST00000078505 Cux2P70298 1426 aa21.88■■□□□ 1.09
Rtn1-202ENSMUST00000078505 Hspa5P20029 655 aaKnown RBP21.86■■□□□ 1.09
Rtn1-202ENSMUST00000078505 Ncapd3Q6ZQK0 1506 aa21.85■■□□□ 1.09
Rtn1-202ENSMUST00000078505 Shroom4Q1W617 1475 aa21.78■■□□□ 1.08
Rtn1-202ENSMUST00000078505 Wdr62Q3U3T8 1523 aa21.78■■□□□ 1.08
Rtn1-202ENSMUST00000078505 AqrQ8CFQ3 1481 aaKnown RBP21.77■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 90.3 ms