RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Psmb8P28063 276 aa11.09□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Rpl39lQ9CQD0 51 aa11.09□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Spry2Q9QXV8 315 aa11.09□□□□□ -0.63
Pcdh20-201ENSMUST00000061628 Tfpi2O35536 230 aa11.08□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 P01747 120 aa11.08□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Brk1Q91VR8 75 aa11.08□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Ypel4Q65Z93 127 aa11.08□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Ufsp1Q9CZP0 217 aa11.08□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Cspg4Q8VHY0 2327 aa11.08□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 ColqO35348 457 aa11.07□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 9430015G10RikA2ASP7 199 aa11.07□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 PtprsB0V2N1 1907 aa11.07□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 F5O88783 2183 aa11.07□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Eml6Q5SQM0 1958 aa11.06□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 FcorP0DJI6 106 aa11.06□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Pla2g2cP48076 150 aa11.06□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Ighv1-63A0A075B5X2 117 aa11.06□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Dkk4Q8VEJ3 221 aa11.06□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 E130114P18RikF6S0S7 154 aa11.05□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Notch3Q61982 2318 aa11.05□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Igf1P05017 153 aa11.05□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 SptssbQ925E8 76 aa11.05□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Ube2d4D3YUH6 135 aa11.05□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Dennd4cA6H8H2 1906 aa11.05□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Gm9925F6T2U3 160 aa11.05□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Chchd7Q8K2Q5 85 aa11.04□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Rnf185Q91YT2 192 aa11.04□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Gm10647E9Q8X0 124 aa11.04□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 NrgnP60761 78 aa11.04□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Ccdc179J3QM76 67 aa11.03□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 FshbQ60687 130 aa11.03□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Q9D8Q6 235 aa11.03□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Prr12E9PYL2 2035 aaKnown RBP11.03□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Ighv3-3A0A0A6YWL2 116 aa11.02□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Mrpl52Q9D0Y8 121 aa11.02□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Wnk1P83741 2377 aa11.02□□□□□ -0.64
Pcdh20-201ENSMUST00000061628 Gm20604F8WIA3 75 aa11.02□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 BC107364E9Q5A2 140 aa11.02□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 1110002E22RikE0CYV9 1786 aa11.02□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Ighv1-5A0A0A6YWG2 117 aa11.02□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Ighv10-1A0A0B4J1J6 119 aa11.02□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Smim20D3Z7Q2 69 aa11.02□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Klk9Q32M27 251 aa11.02□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Pou2af1Q64693 256 aa11.01□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Ighv1-66A0A075B5X5 117 aa11.01□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Fam19a1Q7TPG8 133 aa11.01□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Lypd6Q8BPP5 171 aa11.01□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Gm17521F6QAC8 156 aa11□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Gm12689Q8BQU9 117 aa11□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Sh2d1aO88890 126 aa11□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 P18527 97 aa11□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Sox16Q62247 57 aa11□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 CnfnQ6PCW6 111 aa11□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Ly6c2P0CW03 131 aa11□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Cfc1P97766 202 aa11□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 HelzQ6DFV5 1964 aaKnown RBP10.99□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Q8K1L6 76 aa10.99□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Ighv8-5A0A0A6YY60 119 aa10.99□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Fgf23Q9EPC2 251 aa10.99□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Q9DAQ5 155 aa10.98□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Gm10322F7D7I4 111 aa10.98□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Notch4P31695 1964 aa10.98□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Ighv1-59A0A0A6YXE0 117 aa10.98□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Wipf1Q8K1I7 493 aa10.97□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Cox8cA6H666 72 aa10.97□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 9530003J23RikQ8BM26 151 aa10.97□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Ighv8-12A0A0G2JDE1 119 aa10.96□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Tet1Q3URK3 2007 aaKnown RBP10.96□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 Spink4O35679 86 aa10.96□□□□□ -0.65
Pcdh20-201ENSMUST00000061628 TectaO08523 2155 aa10.96□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 TshbP12656 138 aa10.96□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Gm6899Q3USS0 134 aa10.95□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Med13lQ6JPI3 2207 aa10.95□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Igkv3-4A0A140T8Q4 119 aa10.95□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Plac8l1Q08EJ0 177 aa10.95□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 1700056E22RikF7CNM6 234 aa10.95□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Fhl2O70433 279 aa10.95□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 U90926O08546 118 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 C1qcQ02105 246 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Fer1l4A3KGK3 1992 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 1520401A03RikA0A0J9YVH6 598 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Sec61gP60060 68 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Defb12Q8K4N3 78 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Wdr90Q6ZPG2 1874 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Polr2kQ63871 58 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Ly6hQ9WUC3 139 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Gm28539A0A087WSL9 92 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Gm10577Q3UDV9 132 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 A830005F24RikQ8BRT5 167 aa10.94□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Ighv1-62-1A0A075B5U3 116 aa10.93□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Gm9805F6YK59 57 aa10.93□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Plxnb3Q9QY40 1902 aa10.93□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Gm8439G3UWA7 96 aa10.92□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 B430305J03RikQ8BQQ8 176 aa10.92□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Tcl1b5P56845 121 aa10.92□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Igkv8-21A0A140T8P7 120 aa10.91□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Igkv3-3A0A140T8Q0 119 aa10.91□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Lce6aD3YV94 81 aa10.91□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Rbx1P62878 108 aa10.91□□□□□ -0.66
Pcdh20-201ENSMUST00000061628 Gm4707V9GXN5 68 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 53.5 ms