RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Cd200r3Q5UKY4 296 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 Eif4ebp3Q80VV3 101 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 Gtsf1lQ9CWD0 151 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 NipblQ6KCD5 2798 aaKnown RBP6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 Ighv7-3A0A075B5R2 120 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 B230359F08RikA0A0B4J1K3 109 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 Gm10521E9PZK0 135 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 LhbO09108 141 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 P01788 123 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 Snrpd3P62320 126 aaKnown RBP6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 Rnase2aQ8K196 155 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 Rpp25lQ99JH1 163 aa6.5□□□□□ -1.37
Trim42-201ENSMUST00000035026 Trav7n-4A0A075B620 113 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 Ighv1-15A0A0A6YXA5 117 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 PigyP0C1P0 71 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 B430305J03RikQ8BQQ8 176 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 Defa21Q8C1P2 93 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 QrfpQ8CE23 124 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 Defa28D3Z1V9 94 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 Rpl18aP62717 176 aaKnown RBP6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 9130213A22RikQ3V3T2 120 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 Il1f10Q8R459 152 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 Tac4Q99N14 128 aa6.49□□□□□ -1.37
Trim42-201ENSMUST00000035026 Igkv14-130A0A0G2JF45 117 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Gm36176A0A1W2P8D5 158 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Gm4791J3QQ14 102 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 P01757 117 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Ighv1-39A0A075B5V5 117 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Tmem243B2RVB9 118 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 P01812 117 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Igf1P05017 153 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Smim1P0C8K7 78 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Rnase9P60154 184 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Cacng7P62956 275 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Gm11733Q8BQP1 125 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 IcosQ9WVS0 200 aa6.48□□□□□ -1.37
Trim42-201ENSMUST00000035026 Sorl1O88307 2215 aaKnown RBP6.47□□□□□ -1.37
Trim42-201ENSMUST00000035026 Sertad4A7DTG3 377 aa6.47□□□□□ -1.37
Trim42-201ENSMUST00000035026 Gm21060J3KMU4 56 aa6.47□□□□□ -1.37
Trim42-201ENSMUST00000035026 Ube2d1P61080 147 aaKnown RBP6.47□□□□□ -1.37
Trim42-201ENSMUST00000035026 RprmlQ3URD2 117 aa6.47□□□□□ -1.37
Trim42-201ENSMUST00000035026 A530084C06RikQ3UTW2 186 aa6.47□□□□□ -1.37
Trim42-201ENSMUST00000035026 Trdv1A0A075B657 112 aa6.47□□□□□ -1.37
Trim42-201ENSMUST00000035026 Ly6lH3BJG9 140 aa6.47□□□□□ -1.37
Trim42-201ENSMUST00000035026 Cox6b1P56391 86 aaKnown RBP6.47□□□□□ -1.37
Trim42-201ENSMUST00000035026 Trav14n-2A0A0G2JDF5 121 aa6.46□□□□□ -1.38
Trim42-201ENSMUST00000035026 P18527 97 aa6.46□□□□□ -1.38
Trim42-201ENSMUST00000035026 Ormdl2Q9CQZ0 153 aa6.46□□□□□ -1.38
Trim42-201ENSMUST00000035026 TnxbO35452 4006 aa6.46□□□□□ -1.38
Trim42-201ENSMUST00000035026 Socs3O35718 225 aa6.45□□□□□ -1.38
Trim42-201ENSMUST00000035026 P01819 144 aa6.45□□□□□ -1.38
Trim42-201ENSMUST00000035026 Il3raP26952 396 aa6.45□□□□□ -1.38
Trim42-201ENSMUST00000035026 EppinQ9DA01 134 aa6.45□□□□□ -1.38
Trim42-201ENSMUST00000035026 Gm5294J3QP53 216 aa6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 Psmg4P0C7N9 123 aa6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 Slc25a39Q9D8K8 359 aa6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 Ighv12-3A0A075B5T1 117 aa6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 GfyJ3KML8 504 aa6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 P01789 122 aa6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 Gm10643Q3URG9 111 aa6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 Gm9936Q8C864 160 aa6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 Tmem223Q9CQE2 199 aaKnown RBP6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 Hcfc2Q9D968 241 aa6.44□□□□□ -1.38
Trim42-201ENSMUST00000035026 Igkv1-132A0A0B4J1H9 120 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 Tcte2E9PY37 120 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 Gm2564F6Z9S8 108 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 Ccl19O70460 108 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 P0C1Z5 52 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 Foxi1Q922I5 372 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 SNORCQ9CXL7 121 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 Synj2bpQ9D6K5 145 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 Timm17bQ9Z0V7 172 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 FcgbpE9Q0B5 2583 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 MsmbO08540 113 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 Ppp1r32Q148A4 427 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 Gm9922Q8C3P1 144 aa6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 Srrm2Q8BTI8 2703 aaKnown RBP6.43□□□□□ -1.38
Trim42-201ENSMUST00000035026 1520401A03RikA0A0J9YVH6 598 aa6.42□□□□□ -1.38
Trim42-201ENSMUST00000035026 Krtap16-1A2A5X5 502 aa6.42□□□□□ -1.38
Trim42-201ENSMUST00000035026 P06330 118 aa6.42□□□□□ -1.38
Trim42-201ENSMUST00000035026 Rph3alQ768S4 302 aa6.42□□□□□ -1.38
Trim42-201ENSMUST00000035026 Spint4Q9D263 159 aa6.42□□□□□ -1.38
Trim42-201ENSMUST00000035026 Znf414Q9DCK4 299 aa6.42□□□□□ -1.38
Trim42-201ENSMUST00000035026 Egr2P08152 470 aa6.42□□□□□ -1.38
Trim42-201ENSMUST00000035026 Dkk2Q9QYZ8 259 aa6.42□□□□□ -1.38
Trim42-201ENSMUST00000035026 Hspg2Q05793 3707 aaKnown RBP6.42□□□□□ -1.38
Trim42-201ENSMUST00000035026 Trav4n-4A0A075B615 110 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 PolP10400 120 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Fhl1P97447 280 aaKnown RBP6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 GchfrP99025 84 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Ndufb4Q9CQC7 129 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Tctex1d1Q9D5I4 173 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Trav14n-3A0A075B645 120 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 P01787 123 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Gpx1P11352 201 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Timm8bP62077 83 aaKnown RBP6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Defb45Q3V490 66 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Gm9945Q8BNZ3 91 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Rnase4Q9JJH1 148 aa6.41□□□□□ -1.38
Trim42-201ENSMUST00000035026 Trav6-4A0A075B6B4 115 aa6.4□□□□□ -1.38
Retrieved 100 of 22,080 RNA–protein pairs in 180.4 ms