RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Gm35339A0A140LHH9 1649 aa18.87■□□□□ 0.61
Trim42-201ENSMUST00000035026 NischQ80TM9 1593 aa18.62■□□□□ 0.57
Trim42-201ENSMUST00000035026 Abcc9P70170 1546 aa18.07■□□□□ 0.48
Trim42-201ENSMUST00000035026 Abcc8B2RUS7 1588 aa17.98■□□□□ 0.47
Trim42-201ENSMUST00000035026 ScribQ80U72 1612 aa17.26■□□□□ 0.35
Trim42-201ENSMUST00000035026 Kdm5dQ62240 1548 aa16.7■□□□□ 0.26
Trim42-201ENSMUST00000035026 NacadQ5SWP3 1504 aa16.69■□□□□ 0.26
Trim42-201ENSMUST00000035026 Dcaf1Q80TR8 1506 aa16.6■□□□□ 0.25
Trim42-201ENSMUST00000035026 Sycp2Q9CUU3 1500 aa16.37■□□□□ 0.21
Trim42-201ENSMUST00000035026 Rb1cc1Q9ESK9 1588 aa16.25■□□□□ 0.19
Trim42-201ENSMUST00000035026 BicraF8VPZ9 1578 aa16.14■□□□□ 0.17
Trim42-201ENSMUST00000035026 Rhox8Q6VSS7 320 aa16.12■□□□□ 0.17
Trim42-201ENSMUST00000035026 Ccdc180J3QNE4 1664 aa16.1■□□□□ 0.17
Trim42-201ENSMUST00000035026 Baz1aO88379 1555 aa16.03■□□□□ 0.16
Trim42-201ENSMUST00000035026 Crybg2B7ZCC2 1516 aa15.95■□□□□ 0.14
Trim42-201ENSMUST00000035026 Zcchc6Q5BLK4 1491 aaKnown RBP15.71■□□□□ 0.11
Trim42-201ENSMUST00000035026 Smarca2Q6DIC0 1577 aa15.61■□□□□ 0.09
Trim42-201ENSMUST00000035026 Pds5bQ4VA53 1446 aaKnown RBP15.59■□□□□ 0.09
Trim42-201ENSMUST00000035026 Rtl1Q7M732 1744 aa15.5■□□□□ 0.07
Trim42-201ENSMUST00000035026 Atad2bE9Q166 1460 aaKnown RBP15.5■□□□□ 0.07
Trim42-201ENSMUST00000035026 Thoc2B1AZI6 1594 aaKnown RBP15.46■□□□□ 0.07
Trim42-201ENSMUST00000035026 Cecr2E9Q2Z1 1453 aa15.46■□□□□ 0.06
Trim42-201ENSMUST00000035026 Smarca4Q3TKT4 1613 aaKnown RBP15.45■□□□□ 0.06
Trim42-201ENSMUST00000035026 Dnajc5bQ9CQ94 199 aa15.37■□□□□ 0.05
Trim42-201ENSMUST00000035026 Iqgap2Q3UQ44 1575 aa15.34■□□□□ 0.05
Trim42-201ENSMUST00000035026 Ercc6F8VPZ5 1481 aa15.26■□□□□ 0.03
Trim42-201ENSMUST00000035026 Wdr62Q3U3T8 1523 aa15.19■□□□□ 0.02
Trim42-201ENSMUST00000035026 Cc2d2aQ8CFW7 1633 aa15.19■□□□□ 0.02
Trim42-201ENSMUST00000035026 Frmpd1A2AKB4 1549 aa15.16■□□□□ 0.02
Trim42-201ENSMUST00000035026 Synj1Q8CHC4 1574 aa15.14■□□□□ 0.01
Trim42-201ENSMUST00000035026 Fam135aQ6NS59 1506 aa15.13■□□□□ 0.01
Trim42-201ENSMUST00000035026 Cttnbp2B9EJA2 1648 aa15.13■□□□□ 0.01
Trim42-201ENSMUST00000035026 CftrP26361 1476 aa15.13■□□□□ 0.01
Trim42-201ENSMUST00000035026 Brd4Q9ESU6 1400 aaKnown RBP15.11■□□□□ 0.01
Trim42-201ENSMUST00000035026 Ccdc136Q3TVA9 1136 aa15.07■□□□□ 0
Trim42-201ENSMUST00000035026 Unc13aQ4KUS2 1712 aa15.02□□□□□ -0.01
Trim42-201ENSMUST00000035026 Phldb1Q6PDH0 1371 aaKnown RBP15□□□□□ -0.01
Trim42-201ENSMUST00000035026 Baz1bQ9Z277 1479 aa14.94□□□□□ -0.02
Trim42-201ENSMUST00000035026 Trim41Q5NCC3 630 aa14.87□□□□□ -0.03
Trim42-201ENSMUST00000035026 Ubl4bQ9CQ84 188 aa14.8□□□□□ -0.04
Trim42-201ENSMUST00000035026 Esf1Q3V1V3 845 aaKnown RBP14.75□□□□□ -0.05
Trim42-201ENSMUST00000035026 DiexfQ8BTT6 772 aaKnown RBP14.75□□□□□ -0.05
Trim42-201ENSMUST00000035026 Mrc2Q64449 1479 aa14.74□□□□□ -0.05
Trim42-201ENSMUST00000035026 Top2bQ64511 1612 aa14.68□□□□□ -0.06
Trim42-201ENSMUST00000035026 Rsf1E9PWW9 1441 aaKnown RBP14.68□□□□□ -0.06
Trim42-201ENSMUST00000035026 Lamc3Q9R0B6 1581 aa14.68□□□□□ -0.06
Trim42-201ENSMUST00000035026 Golga3P55937 1487 aa14.66□□□□□ -0.06
Trim42-201ENSMUST00000035026 Kif15Q6P9L6 1387 aa14.63□□□□□ -0.07
Trim42-201ENSMUST00000035026 Cux2P70298 1426 aa14.59□□□□□ -0.07
Trim42-201ENSMUST00000035026 TnnQ80Z71 1560 aa14.59□□□□□ -0.07
Trim42-201ENSMUST00000035026 Cngb1E1AZ71 1325 aa14.5□□□□□ -0.09
Trim42-201ENSMUST00000035026 Kif21aQ9QXL2 1672 aa14.49□□□□□ -0.09
Trim42-201ENSMUST00000035026 Fmn1Q05860 1466 aa14.46□□□□□ -0.09
Trim42-201ENSMUST00000035026 Lrriq1Q0P5X1 1673 aa14.43□□□□□ -0.1
Trim42-201ENSMUST00000035026 Myt1Q8CFC2 1127 aa14.42□□□□□ -0.1
Trim42-201ENSMUST00000035026 Camsap1A2AHC3 1581 aa14.42□□□□□ -0.1
Trim42-201ENSMUST00000035026 Cep164Q5DU05 1446 aa14.4□□□□□ -0.1
Trim42-201ENSMUST00000035026 Ccdc18Q640L5 1455 aa14.39□□□□□ -0.11
Trim42-201ENSMUST00000035026 Npm1Q61937 292 aaKnown RBP14.38□□□□□ -0.11
Trim42-201ENSMUST00000035026 Ccdc88bQ4QRL3 1481 aa14.31□□□□□ -0.12
Trim42-201ENSMUST00000035026 LrpprcQ6PB66 1392 aaKnown RBP14.3□□□□□ -0.12
Trim42-201ENSMUST00000035026 Dhx29Q6PGC1 1365 aaKnown RBP14.3□□□□□ -0.12
Trim42-201ENSMUST00000035026 Il27Q8K3I6 234 aa14.29□□□□□ -0.12
Trim42-201ENSMUST00000035026 Urb2E9Q7L1 1524 aaKnown RBP14.26□□□□□ -0.13
Trim42-201ENSMUST00000035026 Crocc2F6XLV1 1638 aa14.26□□□□□ -0.13
Trim42-201ENSMUST00000035026 PogzQ8BZH4 1409 aaKnown RBP14.25□□□□□ -0.13
Trim42-201ENSMUST00000035026 Top2aQ01320 1528 aaKnown RBP14.24□□□□□ -0.13
Trim42-201ENSMUST00000035026 Eif4g3Q80XI3 1579 aaKnown RBP14.24□□□□□ -0.13
Trim42-201ENSMUST00000035026 Grin2bQ01097 1482 aa14.23□□□□□ -0.13
Trim42-201ENSMUST00000035026 Plb1Q3TTY0 1478 aa14.23□□□□□ -0.13
Trim42-201ENSMUST00000035026 CatipB9EKE5 520 aa14.2□□□□□ -0.14
Trim42-201ENSMUST00000035026 Chic1Q8CBW7 227 aa14.19□□□□□ -0.14
Trim42-201ENSMUST00000035026 Rpgrip1Q9EPQ2 1331 aa14.19□□□□□ -0.14
Trim42-201ENSMUST00000035026 Duox2A2AQ99 1517 aa14.18□□□□□ -0.14
Trim42-201ENSMUST00000035026 Amer1Q7TS75 1132 aa14.14□□□□□ -0.15
Trim42-201ENSMUST00000035026 Ift140E9PY46 1464 aa14.12□□□□□ -0.15
Trim42-201ENSMUST00000035026 NrkQ9R0G8 1455 aa14.12□□□□□ -0.15
Trim42-201ENSMUST00000035026 Samd9lQ69Z37 1561 aa14.11□□□□□ -0.15
Trim42-201ENSMUST00000035026 Efcab5A0JP43 1406 aa14.1□□□□□ -0.15
Trim42-201ENSMUST00000035026 Ube2uB1AUC4 352 aa14.09□□□□□ -0.15
Trim42-201ENSMUST00000035026 HrcG5E8J6 738 aa14.07□□□□□ -0.16
Trim42-201ENSMUST00000035026 Pcgf6Q99NA9 353 aa14.06□□□□□ -0.16
Trim42-201ENSMUST00000035026 Shroom4Q1W617 1475 aa14.06□□□□□ -0.16
Trim42-201ENSMUST00000035026 Disp1Q3TDN0 1521 aa14.06□□□□□ -0.16
Trim42-201ENSMUST00000035026 Rusc2Q80U22 1514 aa14.05□□□□□ -0.16
Trim42-201ENSMUST00000035026 PtprkP35822 1457 aa14.05□□□□□ -0.16
Trim42-201ENSMUST00000035026 Pbrm1Q8BSQ9 1634 aaKnown RBP14.03□□□□□ -0.16
Trim42-201ENSMUST00000035026 Setd1bQ8CFT2 1985 aa14.03□□□□□ -0.16
Trim42-201ENSMUST00000035026 Nup160Q9Z0W3 1402 aaKnown RBP14□□□□□ -0.17
Trim42-201ENSMUST00000035026 Rad54l2Q99NG0 1466 aa13.97□□□□□ -0.17
Trim42-201ENSMUST00000035026 CenpbP27790 599 aa13.97□□□□□ -0.17
Trim42-201ENSMUST00000035026 Magi3Q9EQJ9 1476 aa13.97□□□□□ -0.17
Trim42-201ENSMUST00000035026 Gpatch8A2A6A1 1505 aa13.96□□□□□ -0.17
Trim42-201ENSMUST00000035026 SynmQ70IV5 1561 aa13.94□□□□□ -0.18
Trim42-201ENSMUST00000035026 Shroom2A2ALU4 1481 aa13.94□□□□□ -0.18
Trim42-201ENSMUST00000035026 Cc2d2bA0A286YDU8 1405 aa13.93□□□□□ -0.18
Trim42-201ENSMUST00000035026 Grin2aP35436 1464 aa13.93□□□□□ -0.18
Trim42-201ENSMUST00000035026 Pla2r1Q62028 1487 aa13.9□□□□□ -0.18
Trim42-201ENSMUST00000035026 Bcl11aQ9QYE3 773 aa13.9□□□□□ -0.18
Trim42-201ENSMUST00000035026 AqrQ8CFQ3 1481 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 148.6 ms