Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Trav14n-3A0A075B645 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Trav14n-3A0A075B645 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Trav14n-3A0A075B645 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Trav14n-3A0A075B645 Psd-208ENSMUST00000224556 2034 ntBASIC24.71■■□□□ 1.55
Trav14n-3A0A075B645 Gm25239-201ENSMUST00000174915 86 ntBASIC24.52■■□□□ 1.52
Trav14n-3A0A075B645 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Trav14n-3A0A075B645 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Trav14n-3A0A075B645 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Trav14n-3A0A075B645 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trav14n-3A0A075B645 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav14n-3A0A075B645 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trav14n-3A0A075B645 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trav14n-3A0A075B645 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trav14n-3A0A075B645 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trav14n-3A0A075B645 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trav14n-3A0A075B645 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Trav14n-3A0A075B645 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Trav14n-3A0A075B645 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.89■■□□□ 1.26
Trav14n-3A0A075B645 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Trav14n-3A0A075B645 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Trav14n-3A0A075B645 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trav14n-3A0A075B645 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trav14n-3A0A075B645 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trav14n-3A0A075B645 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.43■■□□□ 1.18
Trav14n-3A0A075B645 Gm15042-201ENSMUST00000120212 883 ntBASIC22.39■■□□□ 1.17
Trav14n-3A0A075B645 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trav14n-3A0A075B645 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.3■■□□□ 1.16
Trav14n-3A0A075B645 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.27■■□□□ 1.16
Trav14n-3A0A075B645 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trav14n-3A0A075B645 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trav14n-3A0A075B645 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Trav14n-3A0A075B645 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav14n-3A0A075B645 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Trav14n-3A0A075B645 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.12■■□□□ 1.13
Trav14n-3A0A075B645 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.12■■□□□ 1.13
Trav14n-3A0A075B645 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.1■■□□□ 1.13
Trav14n-3A0A075B645 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav14n-3A0A075B645 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trav14n-3A0A075B645 Gm15045-201ENSMUST00000117359 883 ntBASIC22.05■■□□□ 1.12
Trav14n-3A0A075B645 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trav14n-3A0A075B645 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trav14n-3A0A075B645 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trav14n-3A0A075B645 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trav14n-3A0A075B645 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trav14n-3A0A075B645 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Trav14n-3A0A075B645 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trav14n-3A0A075B645 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Trav14n-3A0A075B645 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trav14n-3A0A075B645 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.75■■□□□ 1.07
Trav14n-3A0A075B645 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Trav14n-3A0A075B645 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trav14n-3A0A075B645 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav14n-3A0A075B645 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Trav14n-3A0A075B645 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Trav14n-3A0A075B645 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Trav14n-3A0A075B645 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav14n-3A0A075B645 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Trav14n-3A0A075B645 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trav14n-3A0A075B645 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Trav14n-3A0A075B645 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav14n-3A0A075B645 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trav14n-3A0A075B645 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trav14n-3A0A075B645 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trav14n-3A0A075B645 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trav14n-3A0A075B645 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.31■■□□□ 1
Trav14n-3A0A075B645 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Trav14n-3A0A075B645 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Trav14n-3A0A075B645 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trav14n-3A0A075B645 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Trav14n-3A0A075B645 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trav14n-3A0A075B645 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Trav14n-3A0A075B645 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.11■□□□□ 0.97
Trav14n-3A0A075B645 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav14n-3A0A075B645 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav14n-3A0A075B645 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav14n-3A0A075B645 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trav14n-3A0A075B645 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trav14n-3A0A075B645 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trav14n-3A0A075B645 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav14n-3A0A075B645 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav14n-3A0A075B645 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav14n-3A0A075B645 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav14n-3A0A075B645 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trav14n-3A0A075B645 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trav14n-3A0A075B645 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Trav14n-3A0A075B645 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav14n-3A0A075B645 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav14n-3A0A075B645 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Trav14n-3A0A075B645 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav14n-3A0A075B645 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav14n-3A0A075B645 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav14n-3A0A075B645 Gm24109-201ENSMUST00000175489 103 ntBASIC20.82■□□□□ 0.92
Trav14n-3A0A075B645 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.79■□□□□ 0.92
Trav14n-3A0A075B645 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trav14n-3A0A075B645 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav14n-3A0A075B645 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav14n-3A0A075B645 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Trav14n-3A0A075B645 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav14n-3A0A075B645 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms