Protein–RNA interactions for Protein: Q99JH1

Rpp25l, Ribonuclease P protein subunit p25-like protein, mousemouse

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp25lQ99JH1 Gm25239-201ENSMUST00000174915 86 ntBASIC27.9■■■□□ 2.06
Rpp25lQ99JH1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Rpp25lQ99JH1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Rpp25lQ99JH1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Rpp25lQ99JH1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Rpp25lQ99JH1 Psd-208ENSMUST00000224556 2034 ntBASIC25.44■■□□□ 1.66
Rpp25lQ99JH1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Rpp25lQ99JH1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Rpp25lQ99JH1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Rpp25lQ99JH1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Rpp25lQ99JH1 Gm15042-201ENSMUST00000120212 883 ntBASIC24.73■■□□□ 1.55
Rpp25lQ99JH1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Rpp25lQ99JH1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Rpp25lQ99JH1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpp25lQ99JH1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rpp25lQ99JH1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rpp25lQ99JH1 Gm15045-201ENSMUST00000117359 883 ntBASIC24.21■■□□□ 1.47
Rpp25lQ99JH1 Gm24109-201ENSMUST00000175489 103 ntBASIC24.18■■□□□ 1.46
Rpp25lQ99JH1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.99■■□□□ 1.43
Rpp25lQ99JH1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Rpp25lQ99JH1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Rpp25lQ99JH1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Rpp25lQ99JH1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Rpp25lQ99JH1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Rpp25lQ99JH1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Rpp25lQ99JH1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Rpp25lQ99JH1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rpp25lQ99JH1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rpp25lQ99JH1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rpp25lQ99JH1 Gm23366-201ENSMUST00000175022 89 ntBASIC23.37■■□□□ 1.33
Rpp25lQ99JH1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rpp25lQ99JH1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rpp25lQ99JH1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rpp25lQ99JH1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rpp25lQ99JH1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.24■■□□□ 1.31
Rpp25lQ99JH1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rpp25lQ99JH1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rpp25lQ99JH1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.2■■□□□ 1.3
Rpp25lQ99JH1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rpp25lQ99JH1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.17■■□□□ 1.3
Rpp25lQ99JH1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rpp25lQ99JH1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rpp25lQ99JH1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Rpp25lQ99JH1 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.96■■□□□ 1.27
Rpp25lQ99JH1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rpp25lQ99JH1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rpp25lQ99JH1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.84■■□□□ 1.25
Rpp25lQ99JH1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Rpp25lQ99JH1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rpp25lQ99JH1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Rpp25lQ99JH1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.76■■□□□ 1.23
Rpp25lQ99JH1 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.74■■□□□ 1.23
Rpp25lQ99JH1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.73■■□□□ 1.23
Rpp25lQ99JH1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Rpp25lQ99JH1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rpp25lQ99JH1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Rpp25lQ99JH1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpp25lQ99JH1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Rpp25lQ99JH1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.19
Rpp25lQ99JH1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rpp25lQ99JH1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
Rpp25lQ99JH1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.44■■□□□ 1.18
Rpp25lQ99JH1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpp25lQ99JH1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpp25lQ99JH1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rpp25lQ99JH1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpp25lQ99JH1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rpp25lQ99JH1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Rpp25lQ99JH1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Rpp25lQ99JH1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.24■■□□□ 1.15
Rpp25lQ99JH1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Rpp25lQ99JH1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Rpp25lQ99JH1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rpp25lQ99JH1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rpp25lQ99JH1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rpp25lQ99JH1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Rpp25lQ99JH1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Rpp25lQ99JH1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Rpp25lQ99JH1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Rpp25lQ99JH1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Rpp25lQ99JH1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Rpp25lQ99JH1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.94■■□□□ 1.1
Rpp25lQ99JH1 Gm25238-201ENSMUST00000174914 89 ntBASIC21.94■■□□□ 1.1
Rpp25lQ99JH1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Rpp25lQ99JH1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Rpp25lQ99JH1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Rpp25lQ99JH1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Rpp25lQ99JH1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Rpp25lQ99JH1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Rpp25lQ99JH1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Rpp25lQ99JH1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rpp25lQ99JH1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rpp25lQ99JH1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Rpp25lQ99JH1 Gm27325-201ENSMUST00000175467 74 ntBASIC21.73■■□□□ 1.07
Rpp25lQ99JH1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Rpp25lQ99JH1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.68■■□□□ 1.06
Rpp25lQ99JH1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpp25lQ99JH1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpp25lQ99JH1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rpp25lQ99JH1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms