RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Gphb5Q812B2 130 aa9.49□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Igkv2-109A0A075B5K6 120 aa9.49□□□□□ -0.89
Ssh1-202ENSMUST00000112298 P01674 108 aa9.49□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Pou2af1Q64693 256 aa9.49□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Ebi3O35228 228 aa9.48□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Myo7bQ99MZ6 2113 aa9.48□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Klk12B2RVZ0 247 aa9.48□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Rnase1P00683 149 aa9.48□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Tcl1b3P56842 122 aa9.48□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Gm9958Q8C9U4 106 aa9.48□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Ly6gP35461 111 aa9.48□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Cdpf1Q8R3A2 119 aa9.48□□□□□ -0.89
Ssh1-202ENSMUST00000112298 MyofQ69ZN7 2048 aaKnown RBP9.47□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Trav9n-4A0A075B631 113 aa9.47□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Reg3bP35230 175 aa9.47□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Trav13n-2A0A0G2JF93 110 aa9.47□□□□□ -0.89
Ssh1-202ENSMUST00000112298 P06328 117 aa9.47□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Smim20D3Z7Q2 69 aa9.46□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Gm9913Q8BQQ2 135 aa9.46□□□□□ -0.89
Ssh1-202ENSMUST00000112298 UtrnE9Q6R7 3430 aa9.46□□□□□ -0.89
Ssh1-202ENSMUST00000112298 Trav13-1A0A075B644 110 aa9.46□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Trav13-4-dv7A0A075B6C2 110 aa9.46□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Igkv3-10A0A0G2JGN0 119 aa9.46□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Sox16Q62247 57 aa9.46□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Igkv1-35A0A0G2JDE5 120 aa9.46□□□□□ -0.9
Ssh1-202ENSMUST00000112298 AW146154Q3TPQ7 468 aa9.46□□□□□ -0.9
Ssh1-202ENSMUST00000112298 CrygcQ61597 174 aa9.46□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Rpl39lQ9CQD0 51 aa9.45□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Cacna1gQ5SUF7 2381 aa9.45□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Ighv1-61P01749 117 aa9.45□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Iglv1A0A075B663 117 aa9.45□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Gm17359A0A0G2JEB7 487 aa9.45□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Gm10542F6XDR3 90 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Tfpi2O35536 230 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Spink4O35679 86 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Igf1P05017 153 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 MgamB5THE2 1827 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 4930470P17RikQ9D542 155 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 B230359F08RikA0A0B4J1K3 109 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 P84751 237 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Gm10401E9Q3K6 71 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Sec61gP60060 68 aa9.44□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Higd2aQ9CQJ1 106 aa9.43□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Q9CX25 107 aa9.43□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Map6d1Q14BB9 191 aa9.43□□□□□ -0.9
Ssh1-202ENSMUST00000112298 AvpP35455 168 aa9.43□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Klk5Q9D140 293 aa9.43□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Ighv1-85A0A075B5Y6 117 aa9.42□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Parp4E9PYK3 1969 aa9.42□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Q9D131 166 aa9.42□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Crybg1A0A0G2JG52 2065 aa9.42□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Col5a3Q9JLI2 1739 aa9.42□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Klk9Q32M27 251 aa9.42□□□□□ -0.9
Ssh1-202ENSMUST00000112298 SrcapA0A087WQ44 3271 aa9.41□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Sprr3O09116 238 aa9.41□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Triap1Q9D8Z2 76 aa9.41□□□□□ -0.9
Ssh1-202ENSMUST00000112298 P01728 117 aa9.41□□□□□ -0.9
Ssh1-202ENSMUST00000112298 P01820 115 aa9.41□□□□□ -0.9
Ssh1-202ENSMUST00000112298 FancmQ8BGE5 2021 aa9.41□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Gm44965A0A0N4SVR3 59 aa9.41□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Defb12Q8K4N3 78 aa9.4□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Arhgap21Q6DFV3 1944 aa9.4□□□□□ -0.9
Ssh1-202ENSMUST00000112298 Cnot1Q6ZQ08 2375 aaKnown RBP9.4□□□□□ -0.9
Ssh1-202ENSMUST00000112298 PpdpfQ9CR37 115 aa9.4□□□□□ -0.9
Ssh1-202ENSMUST00000112298 9530003J23RikQ8BM26 151 aa9.4□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Ighv1-82A0A0G2JEU7 117 aa9.39□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Timm17bQ9Z0V7 172 aa9.39□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Ube2d4D3YUH6 135 aa9.39□□□□□ -0.91
Ssh1-202ENSMUST00000112298 P01658 132 aa9.39□□□□□ -0.91
Ssh1-202ENSMUST00000112298 CtrlQ9ER05 264 aa9.39□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Gm17521F6QAC8 156 aa9.39□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Ccdc179J3QM76 67 aa9.39□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Pip4p1Q3TWL2 284 aa9.39□□□□□ -0.91
Ssh1-202ENSMUST00000112298 SvipQ3UZP4 77 aa9.39□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Sptan1P16546 2472 aaKnown RBP9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Fgfbp3Q1HCM0 245 aa9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Ufsp1Q9CZP0 217 aa9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Anapc1P53995 1944 aaKnown RBP9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 AtrxQ61687 2476 aaKnown RBP9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Igkv3-4A0A140T8Q4 119 aa9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Cfc1P97766 202 aa9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Psmb11Q8BG41 302 aa9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Col6a6Q8C6K9 2265 aa9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Ighv8-12A0A0G2JDE1 119 aa9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Pcnx1Q9QYC1 2344 aa9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Trip12G5E870 2025 aaKnown RBP9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Pla2g2dQ9WVF6 144 aa9.38□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Gm28539A0A087WSL9 92 aa9.37□□□□□ -0.91
Ssh1-202ENSMUST00000112298 9430015G10RikA2ASP7 199 aa9.37□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Tcte2E9PY37 120 aa9.37□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Pcdh15Q99PJ1 1943 aa9.37□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Col24a1Q30D77 1733 aa9.37□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Gm20604F8WIA3 75 aa9.37□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Arfgef3Q3UGY8 2170 aa9.37□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Spry2Q9QXV8 315 aa9.37□□□□□ -0.91
Ssh1-202ENSMUST00000112298 P01747 120 aa9.37□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Gm5629P06327 117 aa9.36□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Fam19a1Q7TPG8 133 aa9.36□□□□□ -0.91
Ssh1-202ENSMUST00000112298 Ighv10-1A0A0B4J1J6 119 aa9.36□□□□□ -0.91
Ssh1-202ENSMUST00000112298 BC107364E9Q5A2 140 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 76 ms