RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Ighv2-7A0A075B5Q8 116 aa14.09□□□□□ -0.15
Ebf3-201ENSMUST00000033378 A0A286YE02 88 aa14.09□□□□□ -0.15
Ebf3-201ENSMUST00000033378 P06328 117 aa14.09□□□□□ -0.15
Ebf3-201ENSMUST00000033378 Dad1P61804 113 aa14.09□□□□□ -0.15
Ebf3-201ENSMUST00000033378 P18527 97 aa14.08□□□□□ -0.15
Ebf3-201ENSMUST00000033378 Sp5Q9JHX2 398 aa14.08□□□□□ -0.15
Ebf3-201ENSMUST00000033378 Igkv4-74A0A0B4J1I3 119 aa14.07□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Smim20D3Z7Q2 69 aa14.07□□□□□ -0.16
Ebf3-201ENSMUST00000033378 AW146154Q3TPQ7 468 aa14.07□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Nsun4C4P6S0 806 aaKnown RBP14.07□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Igkv4-69A0A0B4J1I6 116 aa14.07□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Gm14137Q8CE97 175 aa14.07□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Q9CX25 107 aa14.07□□□□□ -0.16
Ebf3-201ENSMUST00000033378 BC048502Q80Y74 154 aa14.06□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Cfap126Q6P8X9 189 aa14.06□□□□□ -0.16
Ebf3-201ENSMUST00000033378 1810032O08RikE9PZV8 113 aa14.06□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Dph3Q8K0W9 82 aa14.06□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Odf3Q920N1 254 aa14.06□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Inafm2A0A1L1STD6 152 aa14.05□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Rnf185Q91YT2 192 aa14.05□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Ang3P97802 145 aa14.04□□□□□ -0.16
Ebf3-201ENSMUST00000033378 AcanQ61282 2132 aaKnown RBP14.04□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Q9DAQ5 155 aa14.04□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Prh1P05142 261 aa14.04□□□□□ -0.16
Ebf3-201ENSMUST00000033378 P01747 120 aa14.03□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Q99M08 65 aa14.03□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Ighv1-82A0A0G2JEU7 117 aa14.03□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Igkv4-79A0A075B5L8 119 aa14.02□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Cox7a1P56392 80 aa14.02□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Atp5g1Q9CR84 136 aa14.02□□□□□ -0.16
Ebf3-201ENSMUST00000033378 Gm5629P06327 117 aa14.02□□□□□ -0.17
Ebf3-201ENSMUST00000033378 GhrhP16043 103 aa14.02□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Igkv4-57A0A0A6YYE7 117 aa14.02□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Trav4-3A0A0B4J1K1 110 aa14.02□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Trav11A0A0B4J1J9 114 aa14.01□□□□□ -0.17
Ebf3-201ENSMUST00000033378 AngP21570 145 aa14.01□□□□□ -0.17
Ebf3-201ENSMUST00000033378 TroQ6DIC6 2087 aa14.01□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Gm10542F6XDR3 90 aa14.01□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Ccl21aP84444 133 aa14.01□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Ccl21bP86792 133 aa14.01□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Ccl21cP86793 133 aa14.01□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Atp5eP56382 52 aa14□□□□□ -0.17
Ebf3-201ENSMUST00000033378 P84751 237 aa14□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Igkv4-78A0A0A6YYE5 119 aa13.99□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Pkd1l2Q7TN88 2461 aa13.99□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Sslp1Q3UN54 99 aa13.99□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Piezo1E2JF22 2547 aa13.99□□□□□ -0.17
Ebf3-201ENSMUST00000033378 MifP34884 115 aaKnown RBP13.98□□□□□ -0.17
Ebf3-201ENSMUST00000033378 1700010B08RikQ9DAI7 102 aa13.98□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Gm12057A0A087WR21 115 aa13.98□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Igkv8-34A0A0G2JDU0 121 aa13.98□□□□□ -0.17
Ebf3-201ENSMUST00000033378 GfyJ3KML8 504 aa13.98□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Ighv1-11A0A0A6YWI9 117 aa13.98□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Fhl1P97447 280 aaKnown RBP13.98□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Wisp2Q9Z0G4 251 aa13.98□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Rbm3O89086 153 aaKnown RBP13.97□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Cfc1P97766 202 aa13.97□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Gm10775Q3V290 127 aa13.97□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Lyrm9Q3UN90 78 aa13.97□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Ighv1-75A0A075B5Y2 117 aa13.97□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Ighv12-3A0A075B5T1 117 aa13.96□□□□□ -0.17
Ebf3-201ENSMUST00000033378 FcorP0DJI6 106 aa13.96□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Igkv1-35A0A0G2JDE5 120 aa13.96□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Trav13d-4A0A0G2JFX3 110 aa13.96□□□□□ -0.17
Ebf3-201ENSMUST00000033378 Wipf1Q8K1I7 493 aa13.96□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Fam110dQ80X91 271 aa13.95□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Ighv13-2A0A0A6YWN3 119 aa13.95□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Gm1968Q3T9I3 115 aa13.95□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Abca2P41234 2434 aa13.94□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Trav13-2A0A075B649 110 aa13.94□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Trav13n-2A0A0G2JF93 110 aa13.94□□□□□ -0.18
Ebf3-201ENSMUST00000033378 P01820 115 aa13.94□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Gata1P17679 413 aa13.94□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Prrc2aQ7TSC1 2158 aaKnown RBP13.94□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Atp5g3P56384 141 aa13.94□□□□□ -0.18
Ebf3-201ENSMUST00000033378 E130116L18RikQ8BMV6 101 aa13.94□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Trav13-4-dv7A0A075B6C2 110 aa13.93□□□□□ -0.18
Ebf3-201ENSMUST00000033378 BC067074F6RXI4 2391 aa13.93□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Gm20481G3UXK4 153 aa13.93□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Arhgap32Q811P8 2089 aa13.93□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Trav13-1A0A075B644 110 aa13.93□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Tmem213Q08EA8 116 aa13.92□□□□□ -0.18
Ebf3-201ENSMUST00000033378 1110002E22RikE0CYV9 1786 aa13.92□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Acyp1P56376 99 aa13.92□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Dand5Q76LW6 185 aa13.92□□□□□ -0.18
Ebf3-201ENSMUST00000033378 B230359F08RikA0A0B4J1K3 109 aa13.92□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Lmo4P61969 165 aa13.92□□□□□ -0.18
Ebf3-201ENSMUST00000033378 A130051J06RikQ8CAU1 227 aa13.92□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Gm16223Q8CBM3 117 aa13.92□□□□□ -0.18
Ebf3-201ENSMUST00000033378 TshbP12656 138 aa13.91□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Gm10518F6UQQ9 182 aa13.91□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Crlf1Q9JM58 425 aa13.91□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Igf1P05017 153 aa13.91□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Gm28539A0A087WSL9 92 aa13.9□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Sptbn4E9PX29 2561 aa13.9□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Igkv2-109A0A075B5K6 120 aa13.9□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Igkv1-122A0A140T8M9 119 aa13.9□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Erdr1J3QMM0 206 aa13.9□□□□□ -0.18
Ebf3-201ENSMUST00000033378 4930470P17RikQ9D542 155 aa13.9□□□□□ -0.18
Ebf3-201ENSMUST00000033378 Pla2g2dQ9WVF6 144 aa13.9□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms