Protein–RNA interactions for Protein: A0A0A6YYE7

Igkv4-57, Immunoglobulin kappa variable 4-57 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-57A0A0A6YYE7 Gm25239-201ENSMUST00000174915 86 ntBASIC29.71■■■□□ 2.35
Igkv4-57A0A0A6YYE7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Igkv4-57A0A0A6YYE7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Igkv4-57A0A0A6YYE7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Igkv4-57A0A0A6YYE7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Igkv4-57A0A0A6YYE7 Gm15042-201ENSMUST00000120212 883 ntBASIC26.25■■□□□ 1.79
Igkv4-57A0A0A6YYE7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
Igkv4-57A0A0A6YYE7 Gm15045-201ENSMUST00000117359 883 ntBASIC25.73■■□□□ 1.71
Igkv4-57A0A0A6YYE7 Gm24109-201ENSMUST00000175489 103 ntBASIC25.64■■□□□ 1.7
Igkv4-57A0A0A6YYE7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Igkv4-57A0A0A6YYE7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Igkv4-57A0A0A6YYE7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Igkv4-57A0A0A6YYE7 Psd-208ENSMUST00000224556 2034 ntBASIC24.95■■□□□ 1.58
Igkv4-57A0A0A6YYE7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.89■■□□□ 1.57
Igkv4-57A0A0A6YYE7 Gm23366-201ENSMUST00000175022 89 ntBASIC24.85■■□□□ 1.57
Igkv4-57A0A0A6YYE7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Igkv4-57A0A0A6YYE7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Igkv4-57A0A0A6YYE7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Igkv4-57A0A0A6YYE7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Igkv4-57A0A0A6YYE7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Igkv4-57A0A0A6YYE7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Igkv4-57A0A0A6YYE7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Igkv4-57A0A0A6YYE7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Igkv4-57A0A0A6YYE7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Igkv4-57A0A0A6YYE7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Igkv4-57A0A0A6YYE7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.3■■□□□ 1.48
Igkv4-57A0A0A6YYE7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Igkv4-57A0A0A6YYE7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Igkv4-57A0A0A6YYE7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Igkv4-57A0A0A6YYE7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Igkv4-57A0A0A6YYE7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.06■■□□□ 1.44
Igkv4-57A0A0A6YYE7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Igkv4-57A0A0A6YYE7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.96■■□□□ 1.43
Igkv4-57A0A0A6YYE7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Igkv4-57A0A0A6YYE7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC23.69■■□□□ 1.38
Igkv4-57A0A0A6YYE7 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Igkv4-57A0A0A6YYE7 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Igkv4-57A0A0A6YYE7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Igkv4-57A0A0A6YYE7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.52■■□□□ 1.36
Igkv4-57A0A0A6YYE7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Igkv4-57A0A0A6YYE7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Igkv4-57A0A0A6YYE7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
Igkv4-57A0A0A6YYE7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Igkv4-57A0A0A6YYE7 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Igkv4-57A0A0A6YYE7 Gm25238-201ENSMUST00000174914 89 ntBASIC23.35■■□□□ 1.33
Igkv4-57A0A0A6YYE7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Igkv4-57A0A0A6YYE7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Igkv4-57A0A0A6YYE7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC23.31■■□□□ 1.32
Igkv4-57A0A0A6YYE7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.3■■□□□ 1.32
Igkv4-57A0A0A6YYE7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Igkv4-57A0A0A6YYE7 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Igkv4-57A0A0A6YYE7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Igkv4-57A0A0A6YYE7 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Igkv4-57A0A0A6YYE7 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Igkv4-57A0A0A6YYE7 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.11■■□□□ 1.29
Igkv4-57A0A0A6YYE7 Gm27325-201ENSMUST00000175467 74 ntBASIC23.05■■□□□ 1.28
Igkv4-57A0A0A6YYE7 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Igkv4-57A0A0A6YYE7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.99■■□□□ 1.27
Igkv4-57A0A0A6YYE7 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Igkv4-57A0A0A6YYE7 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Igkv4-57A0A0A6YYE7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
Igkv4-57A0A0A6YYE7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Igkv4-57A0A0A6YYE7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.9■■□□□ 1.26
Igkv4-57A0A0A6YYE7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Igkv4-57A0A0A6YYE7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
Igkv4-57A0A0A6YYE7 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Igkv4-57A0A0A6YYE7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Igkv4-57A0A0A6YYE7 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Igkv4-57A0A0A6YYE7 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.74■■□□□ 1.23
Igkv4-57A0A0A6YYE7 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Igkv4-57A0A0A6YYE7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Igkv4-57A0A0A6YYE7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv4-57A0A0A6YYE7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22.7■■□□□ 1.22
Igkv4-57A0A0A6YYE7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Igkv4-57A0A0A6YYE7 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.67■■□□□ 1.22
Igkv4-57A0A0A6YYE7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22.66■■□□□ 1.22
Igkv4-57A0A0A6YYE7 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Igkv4-57A0A0A6YYE7 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Igkv4-57A0A0A6YYE7 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Igkv4-57A0A0A6YYE7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Igkv4-57A0A0A6YYE7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC22.48■■□□□ 1.19
Igkv4-57A0A0A6YYE7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv4-57A0A0A6YYE7 Rab21-202ENSMUST00000218831 843 ntBASIC22.46■■□□□ 1.19
Igkv4-57A0A0A6YYE7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv4-57A0A0A6YYE7 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv4-57A0A0A6YYE7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Igkv4-57A0A0A6YYE7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.34■■□□□ 1.17
Igkv4-57A0A0A6YYE7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv4-57A0A0A6YYE7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.25■■□□□ 1.15
Igkv4-57A0A0A6YYE7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv4-57A0A0A6YYE7 Gm25262-201ENSMUST00000174934 133 ntBASIC22.22■■□□□ 1.15
Igkv4-57A0A0A6YYE7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv4-57A0A0A6YYE7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv4-57A0A0A6YYE7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv4-57A0A0A6YYE7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Igkv4-57A0A0A6YYE7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Igkv4-57A0A0A6YYE7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Igkv4-57A0A0A6YYE7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.14■■□□□ 1.14
Igkv4-57A0A0A6YYE7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.14■■□□□ 1.13
Igkv4-57A0A0A6YYE7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms