RNA–Protein interactions for RNA: ENSMUST00000006221.13

Vps54-201, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vps54, Length 4,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-201ENSMUST00000006221 Gm20499D3Z4G5 72 aa8.37□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ndufs7Q9DC70 224 aa8.37□□□□□ -1.07
Vps54-201ENSMUST00000006221 Hectd1Q69ZR2 2618 aaKnown RBP8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 Gm28269A0A087WSG3 125 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ighv1-52A0A0A6YXC3 117 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 Trbv16A0A0B4J1H3 115 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 P01753 117 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 Trav2Q5R1I9 109 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 Gemin7Q9CWY4 129 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 C920008G01RikA0A0B4J1N1 112 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 Lrcol1Q3URS3 161 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 Dpm2Q9Z324 84 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 Arid1bE9Q4N7 2244 aa8.36□□□□□ -1.07
Vps54-201ENSMUST00000006221 Rpl32P62911 135 aaKnown RBP8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 4930596D02RikQ3V0H9 216 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 P01811 117 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 Snrpd3P62320 126 aaKnown RBP8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 Zc2hc1bQ9D534 172 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 BsnO88737 3942 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 Gm17455G3UW87 128 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 2310009B15RikA0A0A6YWI4 143 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 Gm45785A0A1B0GT05 94 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 Esp24A8R0V6 68 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 AngP21570 145 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 Smr3aQ61900 147 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 Rab37Q9JKM7 223 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 Higd1aQ9JLR9 95 aa8.35□□□□□ -1.07
Vps54-201ENSMUST00000006221 Gm35549A0A0N4SUS7 141 aa8.34□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ighv1-85A0A075B5Y6 117 aa8.34□□□□□ -1.07
Vps54-201ENSMUST00000006221 Fam19a4Q7TPG5 135 aa8.34□□□□□ -1.07
Vps54-201ENSMUST00000006221 Mrpl35Q9CQL6 188 aa8.34□□□□□ -1.07
Vps54-201ENSMUST00000006221 Timm17aQ9Z0V8 171 aa8.34□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ighv1-63A0A075B5X2 117 aa8.34□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ube2d3P61079 147 aa8.34□□□□□ -1.07
Vps54-201ENSMUST00000006221 Ube2d2P62838 147 aa8.34□□□□□ -1.07
Vps54-201ENSMUST00000006221 Mpv17l2Q8VIK2 200 aa8.34□□□□□ -1.07
Vps54-201ENSMUST00000006221 Runx1Q03347 451 aa8.33□□□□□ -1.08
Vps54-201ENSMUST00000006221 Gm45717A0A1B0GT68 152 aa8.33□□□□□ -1.08
Vps54-201ENSMUST00000006221 Gm10490F6VBM2 120 aa8.33□□□□□ -1.08
Vps54-201ENSMUST00000006221 CckP09240 115 aa8.33□□□□□ -1.08
Vps54-201ENSMUST00000006221 Samd5Q3V1H9 173 aa8.33□□□□□ -1.08
Vps54-201ENSMUST00000006221 Ighv8-5A0A0A6YY60 119 aa8.33□□□□□ -1.08
Vps54-201ENSMUST00000006221 Gm6812B1AXU1 112 aa8.33□□□□□ -1.08
Vps54-201ENSMUST00000006221 A930009A15RikG3UYI6 118 aa8.33□□□□□ -1.08
Vps54-201ENSMUST00000006221 BC106179Q8C9L1 186 aa8.33□□□□□ -1.08
Vps54-201ENSMUST00000006221 Trav4n-4A0A075B615 110 aa8.32□□□□□ -1.08
Vps54-201ENSMUST00000006221 Usp24B1AY13 2617 aaKnown RBP8.32□□□□□ -1.08
Vps54-201ENSMUST00000006221 Cox8cA6H666 72 aa8.32□□□□□ -1.08
Vps54-201ENSMUST00000006221 Il1f10Q8R459 152 aa8.32□□□□□ -1.08
Vps54-201ENSMUST00000006221 Crip2Q9DCT8 208 aaKnown RBP8.32□□□□□ -1.08
Vps54-201ENSMUST00000006221 Lect2O88803 151 aa8.31□□□□□ -1.08
Vps54-201ENSMUST00000006221 Mfap4Q9D1H9 257 aa8.31□□□□□ -1.08
Vps54-201ENSMUST00000006221 Synj2bpQ9D6K5 145 aa8.31□□□□□ -1.08
Vps54-201ENSMUST00000006221 Tmem263Q9DAM7 115 aa8.31□□□□□ -1.08
Vps54-201ENSMUST00000006221 LeprotO89013 131 aa8.31□□□□□ -1.08
Vps54-201ENSMUST00000006221 4930564D02RikQ9D4S4 103 aa8.31□□□□□ -1.08
Vps54-201ENSMUST00000006221 Hspg2Q05793 3707 aaKnown RBP8.3□□□□□ -1.08
Vps54-201ENSMUST00000006221 NpwA0A1L1STR8 176 aa8.3□□□□□ -1.08
Vps54-201ENSMUST00000006221 B230217C12RikE9Q3Z1 139 aa8.3□□□□□ -1.08
Vps54-201ENSMUST00000006221 Dmrt3Q80WT2 476 aa8.3□□□□□ -1.08
Vps54-201ENSMUST00000006221 Dynlrb2Q9DAJ5 96 aa8.3□□□□□ -1.08
Vps54-201ENSMUST00000006221 Col7a1Q63870 2944 aa8.3□□□□□ -1.08
Vps54-201ENSMUST00000006221 Fhl2O70433 279 aa8.3□□□□□ -1.08
Vps54-201ENSMUST00000006221 A530064D06RikQ8BNV8 229 aa8.3□□□□□ -1.08
Vps54-201ENSMUST00000006221 Ankrd11E9Q4F7 2643 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 Ccl24Q9JKC0 119 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 P06329 120 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 TtrP07309 147 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 P84751 237 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 Morn5Q9DAI9 170 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 Cdip1Q9DB75 208 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 Wnk1P83741 2377 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 Ighv1-5A0A0A6YWG2 117 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 Fam216aQ9DB54 251 aa8.29□□□□□ -1.08
Vps54-201ENSMUST00000006221 Reg3gO09049 174 aa8.28□□□□□ -1.08
Vps54-201ENSMUST00000006221 Trav3-1Q5R1I8 114 aa8.28□□□□□ -1.08
Vps54-201ENSMUST00000006221 Ifitm10Q8BR26 201 aa8.28□□□□□ -1.08
Vps54-201ENSMUST00000006221 Defb47Q30KN1 79 aa8.28□□□□□ -1.08
Vps54-201ENSMUST00000006221 Tcrg-C1A0A075B5Z0 172 aa8.28□□□□□ -1.08
Vps54-201ENSMUST00000006221 Gm11565A2A4M7 156 aa8.28□□□□□ -1.08
Vps54-201ENSMUST00000006221 Rif1Q6PR54 2419 aaKnown RBP8.28□□□□□ -1.08
Vps54-201ENSMUST00000006221 Hivep2Q3UHF7 2430 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Gm20730A0A075B5J6 119 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Gm10135F6TEE5 83 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 BC048562Q80ZQ7 204 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Gm9513B3GLJ6 99 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Krtap27-1E9PX37 202 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Gm933J3QPC1 141 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Gm9913Q8BQQ2 135 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Tac4Q99N14 128 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Cryba4Q9JJV0 196 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Gm5819E9PZ96 154 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Defb18Q30KP5 85 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Klhdc1Q80YG3 406 aa8.27□□□□□ -1.09
Vps54-201ENSMUST00000006221 Trav13d-1A0A075B606 110 aa8.26□□□□□ -1.09
Vps54-201ENSMUST00000006221 Pcp4P63054 62 aa8.26□□□□□ -1.09
Vps54-201ENSMUST00000006221 Cfap126Q6P8X9 189 aa8.26□□□□□ -1.09
Vps54-201ENSMUST00000006221 Dmbt1Q60997 2085 aa8.26□□□□□ -1.09
Vps54-201ENSMUST00000006221 MtorQ9JLN9 2549 aa8.26□□□□□ -1.09
Vps54-201ENSMUST00000006221 Ube2e2Q91W82 201 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 88.7 ms