RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Ighv3-4A0A0A6YXF1 117 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Smlr1J3QMJ4 66 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Cops9Q3U898 57 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 P06328 117 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Zfand3Q497H0 227 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gm20726G3UX18 150 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 TshbP12656 138 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 AW146154Q3TPQ7 468 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Map1aQ9QYR6 2776 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Reg3gO09049 174 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Prss58Q8BW11 241 aa9.67□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Trav9n-2A0A0G2JDP3 113 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Trav9d-4A0A0G2JG37 103 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gm815Q3UWS2 115 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 H1fxQ80ZM5 188 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gm10295Q8CCF3 114 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Igkv4-57A0A0A6YYE7 117 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Trav13n-1A0A0G2JEU8 110 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Rpl35aO55142 110 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Cyyr1Q8VIH7 165 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gm15557A6PWY0 234 aa9.66□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Abca12E9Q876 2595 aa9.65□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gm20499D3Z4G5 72 aa9.65□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Rpl36aP83882 106 aaKnown RBP9.65□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Lyzl4Q9D925 145 aa9.65□□□□□ -0.86
Clcn3-201ENSMUST00000004430 FlnbQ80X90 2602 aaKnown RBP9.65□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gm10251J3QPM5 127 aa9.65□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Gm5629P06327 117 aa9.65□□□□□ -0.86
Clcn3-201ENSMUST00000004430 Ndufb4Q9CQC7 129 aa9.65□□□□□ -0.86
Clcn3-201ENSMUST00000004430 LeprotO89013 131 aa9.65□□□□□ -0.87
Clcn3-201ENSMUST00000004430 RelnQ60841 3461 aa9.65□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Myo18bE9PV66 2605 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 MsmbO08540 113 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 P01643 108 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Gata1P17679 413 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 E130116L18RikQ8BMV6 101 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 B430305J03RikQ8BQQ8 176 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Igkv6-13A0A0G2JGY3 119 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Pla2g2aP31482 146 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 1500011B03RikQ3TTH7 73 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Spink13Q3UTS8 97 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Q9CX25 107 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Morn5Q9DAI9 170 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Smim20D3Z7Q2 69 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Edn2P22389 175 aa9.64□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Dmxl2Q8BPN8 3032 aa9.63□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Glrp1E9Q9S8 174 aa9.63□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Ighv1-53A0A075B5W3 117 aa9.63□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Defa21Q8C1P2 93 aa9.63□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Igkv4-62A0A0G2JDW9 117 aa9.63□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Ighv1-82A0A0G2JEU7 117 aa9.63□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Foxc1Q61572 553 aa9.63□□□□□ -0.87
Clcn3-201ENSMUST00000004430 March3Q8BRX9 218 aa9.63□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Trbv30A0A0B4J1P1 111 aa9.62□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Prh1P05142 261 aa9.62□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Atp5g3P56384 141 aa9.62□□□□□ -0.87
Clcn3-201ENSMUST00000004430 C1qcQ02105 246 aa9.62□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Gm5878E9PUB3 99 aa9.62□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Ly86O88188 162 aa9.62□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Gm4861Q8C5A4 106 aa9.62□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Muc5acE9QAQ8 3455 aa9.62□□□□□ -0.87
Clcn3-201ENSMUST00000004430 PolqQ8CGS6 2544 aa9.62□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Fbn2Q61555 2907 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Gm7075D3Z497 112 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 P01738 130 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 FcorP0DJI6 106 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 NrgnP60761 78 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Ighv3-1A0A075B5S6 116 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Ighv1-58A0A075B5W9 117 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Gm21994F6T2D2 329 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 SrarpQ3ULG3 163 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Lgals4Q8K419 326 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Zfhx4Q9JJN2 3550 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Smim10l1A0A087WNQ7 89 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Gm867A0A1W2P7T4 151 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Atp5g1Q9CR84 136 aa9.61□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Ighv2-7A0A075B5Q8 116 aa9.6□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Gm10542F6XDR3 90 aa9.6□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Smim1P0C8K7 78 aa9.6□□□□□ -0.87
Clcn3-201ENSMUST00000004430 SelenowP63300 88 aa9.6□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Gm904Q3V2L5 102 aa9.6□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Timm17aQ9Z0V8 171 aa9.6□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Vwc2lQ505H4 222 aa9.6□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Ovol3D3YYM0 189 aa9.59□□□□□ -0.87
Clcn3-201ENSMUST00000004430 1810032O08RikE9PZV8 113 aa9.59□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Ccl24Q9JKC0 119 aa9.59□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Cfc1P97766 202 aa9.59□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Defb26Q30KN7 186 aa9.59□□□□□ -0.87
Clcn3-201ENSMUST00000004430 Trav9d-3A0A075B695 113 aa9.58□□□□□ -0.88
Clcn3-201ENSMUST00000004430 P01786 117 aa9.58□□□□□ -0.88
Clcn3-201ENSMUST00000004430 Gm21748Q3UE70 102 aa9.58□□□□□ -0.88
Clcn3-201ENSMUST00000004430 Zfp951A0A087WRH0 451 aa9.58□□□□□ -0.88
Clcn3-201ENSMUST00000004430 Ndufa12Q7TMF3 145 aaKnown RBP9.58□□□□□ -0.88
Clcn3-201ENSMUST00000004430 Ighv8-12A0A0G2JDE1 119 aa9.57□□□□□ -0.88
Clcn3-201ENSMUST00000004430 Nsun4C4P6S0 806 aaKnown RBP9.57□□□□□ -0.88
Clcn3-201ENSMUST00000004430 BC048562Q80ZQ7 204 aa9.57□□□□□ -0.88
Clcn3-201ENSMUST00000004430 A130051J06RikQ8CAU1 227 aa9.57□□□□□ -0.88
Clcn3-201ENSMUST00000004430 Lce6aD3YV94 81 aa9.57□□□□□ -0.88
Clcn3-201ENSMUST00000004430 Ebi3O35228 228 aa9.57□□□□□ -0.88
Clcn3-201ENSMUST00000004430 Xcl1P47993 114 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 50.9 ms