RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm28044L7N1X0 119 aa10.06□□□□□ -0.8
Nup88-201ENSMUST00000035283 P01750 117 aa10.06□□□□□ -0.8
Nup88-201ENSMUST00000035283 Klk7Q91VE3 249 aa10.06□□□□□ -0.8
Nup88-201ENSMUST00000035283 Dpm2Q9Z324 84 aa10.06□□□□□ -0.8
Nup88-201ENSMUST00000035283 Gm6812B1AXU1 112 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 Cela2aP05208 271 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 C1qcQ02105 246 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 Polr2kQ63871 58 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 Mob4Q6PEB6 225 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 Samd10Q7TST3 202 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 Rab37Q9JKM7 223 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 Ins2P01326 110 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 CckP09240 115 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 Klhdc1Q80YG3 406 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 Il1f10Q8R459 152 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 SNORCQ9CXL7 121 aa10.05□□□□□ -0.8
Nup88-201ENSMUST00000035283 Prpf8Q99PV0 2335 aaKnown RBP10.04□□□□□ -0.8
Nup88-201ENSMUST00000035283 Q5BN45 167 aa10.04□□□□□ -0.8
Nup88-201ENSMUST00000035283 Ighv5-8A0A075B676 92 aa10.04□□□□□ -0.8
Nup88-201ENSMUST00000035283 Cfc1P97766 202 aa10.04□□□□□ -0.8
Nup88-201ENSMUST00000035283 BC025920Q3US60 128 aa10.04□□□□□ -0.8
Nup88-201ENSMUST00000035283 Gphb5Q812B2 130 aa10.04□□□□□ -0.8
Nup88-201ENSMUST00000035283 Lrrk2Q5S006 2527 aa10.03□□□□□ -0.8
Nup88-201ENSMUST00000035283 C920008G01RikA0A0B4J1N1 112 aa10.03□□□□□ -0.8
Nup88-201ENSMUST00000035283 F11rO88792 300 aa10.03□□□□□ -0.8
Nup88-201ENSMUST00000035283 Hist1h1tQ07133 208 aa10.03□□□□□ -0.8
Nup88-201ENSMUST00000035283 Atp6v0e2Q91XE7 81 aa10.03□□□□□ -0.8
Nup88-201ENSMUST00000035283 Spg11Q3UHA3 2430 aa10.03□□□□□ -0.8
Nup88-201ENSMUST00000035283 BlcapP62951 87 aa10.02□□□□□ -0.8
Nup88-201ENSMUST00000035283 Lyzl4Q9D925 145 aa10.02□□□□□ -0.8
Nup88-201ENSMUST00000035283 Iah1Q9DB29 249 aa10.02□□□□□ -0.8
Nup88-201ENSMUST00000035283 Ankhd1E9PUR0 2548 aaKnown RBP10.02□□□□□ -0.8
Nup88-201ENSMUST00000035283 Crip2Q9DCT8 208 aaKnown RBP10.02□□□□□ -0.81
Nup88-201ENSMUST00000035283 Sorl1O88307 2215 aaKnown RBP10.02□□□□□ -0.81
Nup88-201ENSMUST00000035283 Trav4n-4A0A075B615 110 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Mllt11P97783 90 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Msrb2Q78J03 175 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Ttc28Q80XJ3 2450 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Ighv1-50A0A075B5W1 117 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Ighv1-66A0A075B5X5 117 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 NpwA0A1L1STR8 176 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 MsmbO08540 113 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 P01726 129 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 FcorP0DJI6 106 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Defb33Q30KN3 62 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 1500011B03RikQ3TTH7 73 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Gm21748Q3UE70 102 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Ankrd39Q9D2X0 183 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 HampQ9EQ21 83 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Fam208bQ5DTT3 2382 aa10.01□□□□□ -0.81
Nup88-201ENSMUST00000035283 Ighv1-64A0A075B5X3 117 aa10□□□□□ -0.81
Nup88-201ENSMUST00000035283 Gm35549A0A0N4SUS7 141 aa10□□□□□ -0.81
Nup88-201ENSMUST00000035283 P01811 117 aa10□□□□□ -0.81
Nup88-201ENSMUST00000035283 Anapc13Q8R034 74 aa10□□□□□ -0.81
Nup88-201ENSMUST00000035283 Ndufb4Q9CQC7 129 aa10□□□□□ -0.81
Nup88-201ENSMUST00000035283 Zc2hc1bQ9D534 172 aa10□□□□□ -0.81
Nup88-201ENSMUST00000035283 Trav6-4A0A075B6B4 115 aa10□□□□□ -0.81
Nup88-201ENSMUST00000035283 Tmem262D3Z338 116 aa10□□□□□ -0.81
Nup88-201ENSMUST00000035283 3110018I06RikQ9CXS0 120 aa10□□□□□ -0.81
Nup88-201ENSMUST00000035283 Dmrt3Q80WT2 476 aa9.99□□□□□ -0.81
Nup88-201ENSMUST00000035283 BC106179Q8C9L1 186 aa9.99□□□□□ -0.81
Nup88-201ENSMUST00000035283 Spag11Q8K4N2 71 aa9.99□□□□□ -0.81
Nup88-201ENSMUST00000035283 Tac4Q99N14 128 aa9.99□□□□□ -0.81
Nup88-201ENSMUST00000035283 Igkv4-69A0A0B4J1I6 116 aa9.98□□□□□ -0.81
Nup88-201ENSMUST00000035283 Rpl13aP19253 203 aaKnown RBP9.98□□□□□ -0.81
Nup88-201ENSMUST00000035283 Itpr1P11881 2749 aa9.98□□□□□ -0.81
Nup88-201ENSMUST00000035283 Rpl32P62911 135 aaKnown RBP9.98□□□□□ -0.81
Nup88-201ENSMUST00000035283 Mrpl35Q9CQL6 188 aa9.98□□□□□ -0.81
Nup88-201ENSMUST00000035283 Morn5Q9DAI9 170 aa9.98□□□□□ -0.81
Nup88-201ENSMUST00000035283 OtoglF7A4A7 2325 aa9.98□□□□□ -0.81
Nup88-201ENSMUST00000035283 Gm10135F6TEE5 83 aa9.97□□□□□ -0.81
Nup88-201ENSMUST00000035283 Defb47Q30KN1 79 aa9.97□□□□□ -0.81
Nup88-201ENSMUST00000035283 Spink12Q9D256 87 aa9.97□□□□□ -0.81
Nup88-201ENSMUST00000035283 Gm17732E9Q5I2 61 aa9.97□□□□□ -0.81
Nup88-201ENSMUST00000035283 4930596D02RikQ3V0H9 216 aa9.97□□□□□ -0.81
Nup88-201ENSMUST00000035283 Ifitm10Q8BR26 201 aa9.97□□□□□ -0.81
Nup88-201ENSMUST00000035283 Higd1aQ9JLR9 95 aa9.97□□□□□ -0.81
Nup88-201ENSMUST00000035283 Timm17aQ9Z0V8 171 aa9.97□□□□□ -0.81
Nup88-201ENSMUST00000035283 Mpv17l2Q8VIK2 200 aa9.96□□□□□ -0.81
Nup88-201ENSMUST00000035283 Gm933J3QPC1 141 aa9.96□□□□□ -0.82
Nup88-201ENSMUST00000035283 Lect2O88803 151 aa9.96□□□□□ -0.82
Nup88-201ENSMUST00000035283 Srp14P16254 110 aaKnown RBP9.96□□□□□ -0.82
Nup88-201ENSMUST00000035283 Chd9Q8BYH8 2885 aa9.96□□□□□ -0.82
Nup88-201ENSMUST00000035283 Ighv1-12A0A0A6YXJ9 117 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Esp24A8R0V6 68 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Gm11444F6QMA6 170 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Gm10553J3QPF1 123 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Pglyrp1O88593 182 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 P01802 115 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Pla2g2aP31482 146 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 P84751 237 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Atp5lQ9CPQ8 103 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Q9DAQ5 155 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Trbv17A0A140T8P8 114 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 OdaphJ3QNT8 126 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Ndufa11Q9D8B4 141 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Lelp1Q9DAE3 120 aa9.95□□□□□ -0.82
Nup88-201ENSMUST00000035283 Scgb1b24B1B0N6 92 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 LeprotO89013 131 aa9.94□□□□□ -0.82
Nup88-201ENSMUST00000035283 Wfdc15aQ8BH89 80 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 72.8 ms