Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Gm25239-201ENSMUST00000174915 86 ntBASIC34.91■■■■□ 3.18
Ndufa11Q9D8B4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.42■■■□□ 2.78
Ndufa11Q9D8B4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Ndufa11Q9D8B4 Gm24109-201ENSMUST00000175489 103 ntBASIC30.4■■■□□ 2.46
Ndufa11Q9D8B4 Gm15042-201ENSMUST00000120212 883 ntBASIC30.26■■■□□ 2.43
Ndufa11Q9D8B4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Ndufa11Q9D8B4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ndufa11Q9D8B4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ndufa11Q9D8B4 Gm15045-201ENSMUST00000117359 883 ntBASIC29.48■■■□□ 2.31
Ndufa11Q9D8B4 Gm23366-201ENSMUST00000175022 89 ntBASIC29.17■■■□□ 2.26
Ndufa11Q9D8B4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ndufa11Q9D8B4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28.43■■■□□ 2.14
Ndufa11Q9D8B4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Ndufa11Q9D8B4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
Ndufa11Q9D8B4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.15■■■□□ 2.1
Ndufa11Q9D8B4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Ndufa11Q9D8B4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ndufa11Q9D8B4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
Ndufa11Q9D8B4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Ndufa11Q9D8B4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Ndufa11Q9D8B4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Ndufa11Q9D8B4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.74■■■□□ 2.03
Ndufa11Q9D8B4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Ndufa11Q9D8B4 Gm25238-201ENSMUST00000174914 89 ntBASIC27.61■■■□□ 2.01
Ndufa11Q9D8B4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Ndufa11Q9D8B4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Ndufa11Q9D8B4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ndufa11Q9D8B4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.18■■□□□ 1.94
Ndufa11Q9D8B4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC27.17■■□□□ 1.94
Ndufa11Q9D8B4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Ndufa11Q9D8B4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Ndufa11Q9D8B4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Ndufa11Q9D8B4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
Ndufa11Q9D8B4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Ndufa11Q9D8B4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
Ndufa11Q9D8B4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.81■■□□□ 1.88
Ndufa11Q9D8B4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.8■■□□□ 1.88
Ndufa11Q9D8B4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC26.74■■□□□ 1.87
Ndufa11Q9D8B4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ndufa11Q9D8B4 Gm25262-201ENSMUST00000174934 133 ntBASIC26.68■■□□□ 1.86
Ndufa11Q9D8B4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.53■■□□□ 1.84
Ndufa11Q9D8B4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ndufa11Q9D8B4 Gm27325-201ENSMUST00000175467 74 ntBASIC26.44■■□□□ 1.82
Ndufa11Q9D8B4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.33■■□□□ 1.81
Ndufa11Q9D8B4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Ndufa11Q9D8B4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ndufa11Q9D8B4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.23■■□□□ 1.79
Ndufa11Q9D8B4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ndufa11Q9D8B4 Rab21-202ENSMUST00000218831 843 ntBASIC26.19■■□□□ 1.78
Ndufa11Q9D8B4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.16■■□□□ 1.78
Ndufa11Q9D8B4 Gm26115-201ENSMUST00000175605 87 ntBASIC26.14■■□□□ 1.78
Ndufa11Q9D8B4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ndufa11Q9D8B4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.12■■□□□ 1.77
Ndufa11Q9D8B4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Ndufa11Q9D8B4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
Ndufa11Q9D8B4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.02■■□□□ 1.76
Ndufa11Q9D8B4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Ndufa11Q9D8B4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Ndufa11Q9D8B4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ndufa11Q9D8B4 Gm8109-201ENSMUST00000194076 746 ntBASIC25.92■■□□□ 1.74
Ndufa11Q9D8B4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ndufa11Q9D8B4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.84■■□□□ 1.73
Ndufa11Q9D8B4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Ndufa11Q9D8B4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.74■■□□□ 1.71
Ndufa11Q9D8B4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ndufa11Q9D8B4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.68■■□□□ 1.7
Ndufa11Q9D8B4 Psd-208ENSMUST00000224556 2034 ntBASIC25.68■■□□□ 1.7
Ndufa11Q9D8B4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.65■■□□□ 1.7
Ndufa11Q9D8B4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
Ndufa11Q9D8B4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Ndufa11Q9D8B4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Ndufa11Q9D8B4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.54■■□□□ 1.68
Ndufa11Q9D8B4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Ndufa11Q9D8B4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ndufa11Q9D8B4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ndufa11Q9D8B4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.41■■□□□ 1.66
Ndufa11Q9D8B4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ndufa11Q9D8B4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
Ndufa11Q9D8B4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ndufa11Q9D8B4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ndufa11Q9D8B4 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.3■■□□□ 1.64
Ndufa11Q9D8B4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.22■■□□□ 1.63
Ndufa11Q9D8B4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.21■■□□□ 1.63
Ndufa11Q9D8B4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ndufa11Q9D8B4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.19■■□□□ 1.62
Ndufa11Q9D8B4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ndufa11Q9D8B4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ndufa11Q9D8B4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Ndufa11Q9D8B4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
Ndufa11Q9D8B4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ndufa11Q9D8B4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Ndufa11Q9D8B4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.08■■□□□ 1.61
Ndufa11Q9D8B4 Gm27322-201ENSMUST00000184007 104 ntBASIC25.07■■□□□ 1.6
Ndufa11Q9D8B4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ndufa11Q9D8B4 Gm24804-201ENSMUST00000174982 85 ntBASIC25.05■■□□□ 1.6
Ndufa11Q9D8B4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ndufa11Q9D8B4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
Ndufa11Q9D8B4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.96■■□□□ 1.59
Ndufa11Q9D8B4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ndufa11Q9D8B4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms