RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Lect2O88803 151 aa5.33□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Mpv17l2Q8VIK2 200 aa5.33□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Trav9d-4A0A0G2JG37 103 aa5.33□□□□□ -1.56
Scn8a-205ENSMUST00000108910 CtsgP28293 261 aa5.33□□□□□ -1.56
Scn8a-205ENSMUST00000108910 4930442H23RikQ9D5G7 103 aa5.33□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ighv3-6P18531 116 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ighv1-64A0A075B5X3 117 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ighv6-7A0A0A6YWU3 119 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 BC048502Q80Y74 154 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ighv1-23A0A0A6YVW3 117 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Igkv4-78A0A0A6YYE5 119 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Slc25a48Q8BW66 306 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Them7Q9DCP4 223 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Q8C708 225 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Mrpl55Q9CZ83 127 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Fstl3Q9EQC7 256 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Gm37988J3QM41 62 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 C730034F03RikQ8BGL5 111 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Tmem14cQ9CQN6 114 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Tnfrsf13bQ9ET35 249 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 P01791 123 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Prp2P05143 317 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Zic4Q61467 341 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Rasl10aQ8K5A4 203 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Cysrt1Q9D1E4 142 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Trav14d-1A0A075B6B1 121 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 LoxP28301 411 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Tomm6Q9CQN3 74 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Abca12E9Q876 2595 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 PtprsB0V2N1 1907 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ighv1-4A0A075B5T4 117 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Igkv2-137A0A0B4J1H6 120 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ighv1-74A0A0G2JGK2 117 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Hoxd3P09027 433 aa5.32□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Runx1Q03347 451 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Tal2Q62282 108 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Morn5Q9DAI9 170 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ighv8-8A0A0A6YXQ0 119 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Wisp3D3Z5L9 354 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Zc2hc1aQ8BJH1 324 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Crlf1Q9JM58 425 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 P01794 123 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 P06330 118 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Cd300eQ8K249 196 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Gm5129F6YHA9 99 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Rmi2Q3UPE3 149 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Spag11Q8K4N2 71 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Igkv6-13A0A0G2JGY3 119 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Q08AU9 97 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Olfr313Q5NC55 308 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Mustn1Q99JI1 82 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 4933414I15RikQ9D4D5 133 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ubl5Q9EPV8 73 aa5.31□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Spink12Q9D256 87 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 B230307C23RikQ8BLB2 64 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Klhdc3Q8VEM9 382 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 P01739 132 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Gm20499D3Z4G5 72 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Fam110aQ8R184 296 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Trav4n-4A0A075B615 110 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Dazap2Q9DCP9 168 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 PkigO70139 76 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ss18l2Q9D174 77 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Srsf2Q62093 221 aaKnown RBP5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ighv1-50A0A075B5W1 117 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Mrps12O35680 139 aa5.3□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Gm11733Q8BQP1 125 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Lage3Q9CR70 148 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Cox11Q6P8I6 275 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 NpbQ8K4P1 119 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Igkv4-57A0A0A6YYE7 117 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Olfr311Q5NC59 308 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 P04945 108 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Fancd2osQ9D4K4 178 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Nop10Q9CQS2 64 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 4930415O20RikQ8CDT5 131 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ifitm1Q9D103 106 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Gm20481G3UXK4 153 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 BC048562Q80ZQ7 204 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ccl24Q9JKC0 119 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Defa21Q8C1P2 93 aa5.29□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Trav12-3A0A075B648 115 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Trbv14A0A140T8L9 115 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Mast4Q811L6 2618 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ighv13-2A0A0A6YWN3 119 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Inafm2A0A1L1STD6 152 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Il22ra2Q80XF5 230 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Gm21994F6T2D2 329 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Bex1Q9R224 128 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Ndufa12Q7TMF3 145 aaKnown RBP5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Gm17324Q8C6J8 137 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Gm17677B3GLJ5 116 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Hectd1Q69ZR2 2618 aaKnown RBP5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Defb29Q8BGW9 78 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Bahcc1Q3UHR0 2643 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Dand5Q76LW6 185 aa5.28□□□□□ -1.56
Scn8a-205ENSMUST00000108910 Trav9-2A0A075B647 113 aa5.27□□□□□ -1.57
Scn8a-205ENSMUST00000108910 Trav9-4A0A0B4J1K2 113 aa5.27□□□□□ -1.57
Scn8a-205ENSMUST00000108910 Znrf2Q71FD5 238 aa5.27□□□□□ -1.57
Scn8a-205ENSMUST00000108910 Gm20730A0A075B5J6 119 aa5.27□□□□□ -1.57
Retrieved 100 of 22,080 RNA–protein pairs in 55.3 ms