RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Trav8-1A0A075B641 109 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Defa37K9J724 93 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 P01747 120 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 P01812 117 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Defa5P28312 93 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Pla2g2aP31482 146 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Defb45Q3V490 66 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Gm10295Q8CCF3 114 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Cspg4Q8VHY0 2327 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Znf580Q9DB38 172 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Igkv4-74A0A0B4J1I3 119 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 1700067P10RikG3X8U2 183 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Edn2P22389 175 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Hint1P70349 126 aaKnown RBP9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Ss18Q62280 418 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Plac1Q9JI83 173 aa9.72□□□□□ -0.85
Nup88-203ENSMUST00000108531 Ighv1-64A0A075B5X3 117 aa9.71□□□□□ -0.85
Nup88-203ENSMUST00000108531 Igkv4-69A0A0B4J1I6 116 aa9.71□□□□□ -0.85
Nup88-203ENSMUST00000108531 Gm44965A0A0N4SVR3 59 aa9.71□□□□□ -0.85
Nup88-203ENSMUST00000108531 Sap30O88574 220 aa9.71□□□□□ -0.85
Nup88-203ENSMUST00000108531 Med13lQ6JPI3 2207 aa9.71□□□□□ -0.86
Nup88-203ENSMUST00000108531 Sptbn1Q62261 2363 aaKnown RBP9.71□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ighv3-8A0A075B5T0 131 aa9.71□□□□□ -0.86
Nup88-203ENSMUST00000108531 Trav6-4A0A075B6B4 115 aa9.71□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ash1lQ99MY8 2958 aa9.71□□□□□ -0.86
Nup88-203ENSMUST00000108531 Iah1Q9DB29 249 aa9.71□□□□□ -0.86
Nup88-203ENSMUST00000108531 Gm12057A0A087WR21 115 aa9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 Tmem238A9JSM3 176 aa9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ccl25O35903 144 aa9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 PspnO70300 156 aa9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 P06328 117 aa9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ighv1-50A0A075B5W1 117 aa9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 Gm10521E9PZK0 135 aa9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 Rpl32P62911 135 aaKnown RBP9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 Spink13Q3UTS8 97 aa9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 Trav7-2Q5R1I3 112 aa9.7□□□□□ -0.86
Nup88-203ENSMUST00000108531 Arhgap32Q811P8 2089 aa9.69□□□□□ -0.86
Nup88-203ENSMUST00000108531 Egr2P08152 470 aa9.69□□□□□ -0.86
Nup88-203ENSMUST00000108531 Klk7Q91VE3 249 aa9.69□□□□□ -0.86
Nup88-203ENSMUST00000108531 Tcf24V9GWT9 166 aa9.69□□□□□ -0.86
Nup88-203ENSMUST00000108531 Sdk1Q3UH53 2193 aa9.69□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ighv1-66A0A075B5X5 117 aa9.68□□□□□ -0.86
Nup88-203ENSMUST00000108531 Sprr3O09116 238 aa9.68□□□□□ -0.86
Nup88-203ENSMUST00000108531 Usmg5Q78IK2 58 aa9.68□□□□□ -0.86
Nup88-203ENSMUST00000108531 LhbO09108 141 aa9.68□□□□□ -0.86
Nup88-203ENSMUST00000108531 Defa24Q5G865 93 aa9.68□□□□□ -0.86
Nup88-203ENSMUST00000108531 Trbv13-1A0A0B4J1P8 112 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 Gm45753A0A1C7CYU8 86 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 BlcapP62951 87 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 Pcp4P63054 62 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 Krtap26-1Q9D7N2 215 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 Pgpep1Q9ESW8 209 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 Gm45717A0A1B0GT68 152 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 Polr2kQ63871 58 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 PmvkQ9D1G2 192 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 Q9D8Q6 235 aa9.67□□□□□ -0.86
Nup88-203ENSMUST00000108531 Tmem262D3Z338 116 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 Cd69P37217 199 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 1500011B03RikQ3TTH7 73 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 BC025920Q3US60 128 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ndufb4Q9CQC7 129 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 Rs1Q9Z1L4 224 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 Cox8cA6H666 72 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 PolP10400 120 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 Fam222aQ6PGH4 453 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 3110018I06RikQ9CXS0 120 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 Dpm2Q9Z324 84 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ubr5Q80TP3 2792 aa9.66□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ncor2Q9WU42 2472 aaKnown RBP9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Trav4n-4A0A075B615 110 aa9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Gm42674D3YUT9 64 aa9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Sigmar1O55242 223 aa9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Gm10226O88253 85 aa9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ube2d1P61080 147 aaKnown RBP9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Pip4p1Q3TWL2 284 aa9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Igkv2-137A0A0B4J1H6 120 aa9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Ighv8-12A0A0G2JDE1 119 aa9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Rpl39P62892 51 aa9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Gphb5Q812B2 130 aa9.65□□□□□ -0.86
Nup88-203ENSMUST00000108531 Trbv16A0A0B4J1H3 115 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 BatfO35284 125 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 P01643 108 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 P01726 129 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Defa3P28310 93 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Bri3P28662 125 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Defa10P50708 93 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Defa15P50713 93 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 SrarpQ3ULG3 163 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Lyzl4Q9D925 145 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Spg11Q3UHA3 2430 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Igkv4-62A0A0G2JDW9 117 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gm20499D3Z4G5 72 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Ccl19O70460 108 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Foxi2Q3I5G5 311 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gm1553Q66VB7 94 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Armcx4E9PWM3 2356 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Dido1Q8C9B9 2256 aaKnown RBP9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Ttc28Q80XJ3 2450 aa9.64□□□□□ -0.87
Nup88-203ENSMUST00000108531 Ighv1-12A0A0A6YXJ9 117 aa9.63□□□□□ -0.87
Nup88-203ENSMUST00000108531 Gm17732E9Q5I2 61 aa9.63□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 78.1 ms