RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gm42674D3YUT9 64 aa9.89□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Defa26Q3L180 93 aa9.89□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Minos1Q7TNS2 76 aa9.89□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Hoxb4P10284 250 aa9.89□□□□□ -0.83
Clcn3-201ENSMUST00000004430 P04944 107 aa9.89□□□□□ -0.83
Clcn3-201ENSMUST00000004430 TtrP07309 147 aa9.89□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Cysltr1Q99JA4 352 aa9.89□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Dpm3Q9D1Q4 92 aa9.89□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Ighv1-77A0A0G2JGS9 117 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Cela2aP05208 271 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Spink10Q8CAC8 162 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Nit2Q9JHW2 276 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Dpm2Q9Z324 84 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Olfr313Q5NC55 308 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 RhohQ9D3G9 191 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Notch2O35516 2470 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 AcanQ61282 2132 aaKnown RBP9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Dchs1E9PVD3 3291 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Ccl19O70460 108 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 CrygcQ61597 174 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Phpt1Q9DAK9 124 aa9.88□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Trdv5A0A075B661 115 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Defb47Q30KN1 79 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Znf740Q6NZQ6 180 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 A730015C16RikQ8C992 119 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Parm1Q923D3 296 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Ifitm2Q99J93 144 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Trav3-4A0A075B654 114 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Lect2O88803 151 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 4930596D02RikQ3V0H9 216 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Gm44965A0A0N4SVR3 59 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Vsig4F6TUL9 280 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Gm17455G3UW87 128 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Rpl39P62892 51 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Gm9958Q8C9U4 106 aa9.87□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Fgf6P21658 208 aa9.86□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Mob4Q6PEB6 225 aa9.86□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Wfdc15bQ9JHY4 80 aa9.86□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Phlda3Q9WV95 125 aa9.86□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Ighv1-23A0A0A6YVW3 117 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Wipf1Q8K1I7 493 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Bahcc1Q3UHR0 2643 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 7420426K07RikQ3UX66 186 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Trav2Q5R1I9 109 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 5730522E02RikQ5SP45 163 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Nhlrc1Q8BR37 401 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Rnf114Q9ET26 229 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 ColqO35348 457 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Cox7cP17665 63 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Prelid3aQ8VE85 172 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Bub3Q9WVA3 326 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Gm20730A0A075B5J6 119 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 UrahQ9CRB3 118 aa9.85□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Prp2P05143 317 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Hoxd3P09027 433 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Foxi2Q3I5G5 311 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 C2cd3Q52KB6 2323 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Samd5Q3V1H9 173 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Nbl1Q61477 178 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 BC067074F6RXI4 2391 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Gm5941Q497P9 117 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Tmem30bQ8BHG3 353 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Ndufa3Q9CQ91 84 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Pgpep1lQ9CWB5 130 aa9.84□□□□□ -0.83
Clcn3-201ENSMUST00000004430 Zfp292Q9Z2U2 2698 aa9.83□□□□□ -0.84
Clcn3-201ENSMUST00000004430 C920008G01RikA0A0B4J1N1 112 aa9.83□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Tmem210Q9D2F0 147 aa9.83□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Hivep3A2A884 2348 aa9.83□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Ighv1-74A0A0G2JGK2 117 aa9.83□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Mrps21P58059 87 aa9.83□□□□□ -0.84
Clcn3-201ENSMUST00000004430 SpinklQ8CEK3 90 aa9.83□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Dnal4Q9DCM4 105 aa9.83□□□□□ -0.84
Clcn3-201ENSMUST00000004430 SpegQ62407 3262 aa9.83□□□□□ -0.84
Clcn3-201ENSMUST00000004430 P01896 185 aa9.82□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Tmem40Q4FJU9 225 aa9.82□□□□□ -0.84
Clcn3-201ENSMUST00000004430 HampQ9EQ21 83 aa9.82□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Rtl10D3YWW5 146 aa9.82□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Ndufa1O35683 70 aa9.82□□□□□ -0.84
Clcn3-201ENSMUST00000004430 PkigO70139 76 aa9.82□□□□□ -0.84
Clcn3-201ENSMUST00000004430 P18527 97 aa9.82□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Znf239P24399 201 aa9.82□□□□□ -0.84
Clcn3-201ENSMUST00000004430 OdaphJ3QNT8 126 aa9.81□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Msrb2Q78J03 175 aa9.81□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Tmem14cQ9CQN6 114 aa9.81□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Fam216aQ9DB54 251 aa9.81□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Tcrg-C1A0A075B5Z0 172 aa9.8□□□□□ -0.84
Clcn3-201ENSMUST00000004430 LoxP28301 411 aa9.8□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Ube2e1P52482 193 aa9.8□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Ss18Q62280 418 aa9.8□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Ube2e2Q91W82 201 aa9.8□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Ighv2-6A0A075B6A7 116 aa9.8□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Gm10553J3QPF1 123 aa9.8□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Rmi2Q3UPE3 149 aa9.8□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Igkv4-71A0A0G2JEH0 117 aa9.8□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Il1f10Q8R459 152 aa9.79□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Odf3Q920N1 254 aa9.79□□□□□ -0.84
Clcn3-201ENSMUST00000004430 P01739 132 aa9.79□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Gm1968Q3T9I3 115 aa9.79□□□□□ -0.84
Clcn3-201ENSMUST00000004430 Olfr311Q5NC59 308 aa9.79□□□□□ -0.84
Clcn3-201ENSMUST00000004430 9130230L23RikQ8CC80 163 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 83.9 ms