RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR43, Length 209 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR43	snR43	SAH1	P39954	449 aa	Known RBP	2.74	□□□□□ -1.97
snR43	snR43	AVT2	P39981	480 aa		2.74	□□□□□ -1.97
snR43	snR43	IRC24	P40580	263 aa		2.74	□□□□□ -1.97
snR43	snR43	LCB2	P40970	561 aa		2.74	□□□□□ -1.97
snR43	snR43	NPA3	P47122	385 aa		2.74	□□□□□ -1.97
snR43	snR43	CTF18	P49956	741 aa		2.74	□□□□□ -1.97
snR43	snR43	GCN5	Q03330	439 aa		2.74	□□□□□ -1.97
snR43	snR43	HEL2	Q05580	639 aa	Known RBP	2.74	□□□□□ -1.97
snR43	snR43	SPP382	Q06411	708 aa	Predicted RBP	2.74	□□□□□ -1.97
snR43	snR43	TDA5	Q06417	326 aa	Known RBP	2.74	□□□□□ -1.97
snR43	snR43	YCG1	Q06680	1035 aa		2.74	□□□□□ -1.97
snR43	snR43	TCO89	Q08921	799 aa		2.74	□□□□□ -1.97
snR43	snR43	YPL150W	Q12152	901 aa		2.74	□□□□□ -1.97
snR43	snR43	LCB4	Q12246	624 aa		2.74	□□□□□ -1.97
snR43	snR43	NSI1	Q12457	570 aa		2.74	□□□□□ -1.97
snR43	snR43	HIS4	P00815	799 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	MSF1	P08425	469 aa		2.73	□□□□□ -1.97
snR43	snR43	RNR2	P09938	399 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	RPL11A	P0C0W9	174 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	SFP1	P32432	683 aa		2.73	□□□□□ -1.97
snR43	snR43	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.73	□□□□□ -1.97	not detected
snR43	snR43	YKL107W	P34251	309 aa		2.73	□□□□□ -1.97
snR43	snR43	VBA5	P36172	582 aa		2.73	□□□□□ -1.97
snR43	snR43	PPS1	P38148	807 aa		2.73	□□□□□ -1.97
snR43	snR43	RFC5	P38251	354 aa		2.73	□□□□□ -1.97
snR43	snR43	BAT1	P38891	393 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	DUN1	P39009	513 aa		2.73	□□□□□ -1.97
snR43	snR43	KAP123	P40069	1113 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	IML2	P47031	731 aa		2.73	□□□□□ -1.97
snR43	snR43	SMC3	P47037	1230 aa		2.73	□□□□□ -1.97
snR43	snR43	YJR054W	P47114	497 aa		2.73	□□□□□ -1.97
snR43	snR43	FLC3	P53121	802 aa		2.73	□□□□□ -1.97
snR43	snR43	YGL036W	P53185	909 aa	Predicted RBP	2.73	□□□□□ -1.97
snR43	snR43	HOS3	Q02959	697 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	MUB1	Q03162	620 aa		2.73	□□□□□ -1.97
snR43	snR43	CLU1	Q03690	1277 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	RLP24	Q07915	199 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	YOR059C	Q08448	450 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	LPX1	Q12405	387 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	RPL11B	Q3E757	174 aa	Predicted RBP	2.73	□□□□□ -1.97
snR43	snR43	LAA1	P39526	2014 aa		2.73	□□□□□ -1.97
snR43	snR43	UTP20	P35194	2493 aa	Known RBP	2.73	□□□□□ -1.97
snR43	snR43	GAL10	P04397	699 aa		2.72	□□□□□ -1.97
snR43	snR43	SNF5	P18480	905 aa		2.72	□□□□□ -1.97
snR43	snR43	CDC42	P19073	191 aa		2.72	□□□□□ -1.97
snR43	snR43	COX11	P19516	300 aa	Known RBP	2.72	□□□□□ -1.97
snR43	snR43	RNR1	P21524	888 aa	Known RBP	2.72	□□□□□ -1.97
snR43	snR43	SAT4	P25333	603 aa	Known RBP	2.72	□□□□□ -1.97
snR43	snR43	HIR1	P32479	840 aa		2.72	□□□□□ -1.97
snR43	snR43	SWI3	P32591	825 aa		2.72	□□□□□ -1.97
snR43	snR43	STE13	P33894	931 aa		2.72	□□□□□ -1.97
snR43	snR43	PIN4	P34217	668 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
snR43	snR43	ECM13	P38195	257 aa		2.72	□□□□□ -1.97
snR43	snR43	YBR184W	P38299	523 aa		2.72	□□□□□ -1.97
snR43	snR43	CRP1	P38845	465 aa	Known RBP	2.72	□□□□□ -1.97
snR43	snR43	UME6	P39001	836 aa		2.72	□□□□□ -1.97
snR43	snR43	YJR061W	P40355	935 aa		2.72	□□□□□ -1.97
snR43	snR43	SDS3	P40505	327 aa		2.72	□□□□□ -1.97
snR43	snR43	GUF1	P46943	645 aa		2.72	□□□□□ -1.97
snR43	snR43	HNT2	P49775	206 aa		2.72	□□□□□ -1.97
snR43	snR43	PIL1	P53252	339 aa	Known RBP	2.72	□□□□□ -1.97
snR43	snR43	COQ6	P53318	479 aa		2.72	□□□□□ -1.97
snR43	snR43	TNA1	P53322	534 aa		2.72	□□□□□ -1.97
snR43	snR43	RPA49	Q01080	415 aa	Predicted RBP	2.72	□□□□□ -1.97
snR43	snR43	MTD1	Q02046	320 aa	Known RBP	2.72	□□□□□ -1.97
snR43	snR43	SMA1	Q02651	245 aa		2.72	□□□□□ -1.97
snR43	snR43	MZM1	Q03429	123 aa	Predicted RBP	2.72	□□□□□ -1.97
snR43	snR43	COG8	Q04632	607 aa		2.72	□□□□□ -1.97
snR43	snR43	RTN1	Q04947	295 aa	Known RBP	2.72	□□□□□ -1.97
snR43	snR43	ECM38	Q05902	660 aa	Predicted RBP	2.72	□□□□□ -1.97
snR43	snR43	TSR1	Q07381	788 aa	Known RBP	2.72	□□□□□ -1.97
snR43	snR43	RSC58	Q07979	502 aa		2.72	□□□□□ -1.97
snR43	snR43	RSB1	Q08417	382 aa		2.72	□□□□□ -1.97
snR43	snR43	CLP1	Q08685	445 aa	Predicted RBP	2.72	□□□□□ -1.97
snR43	snR43	YOR387C	Q08910	206 aa		2.72	□□□□□ -1.97
snR43	snR43	NBP2	Q12163	236 aa		2.72	□□□□□ -1.97
snR43	snR43	MED1	Q12321	566 aa		2.72	□□□□□ -1.97
snR43	snR43	PRP8	P33334	2413 aa	Known RBP	2.71	□□□□□ -1.98
snR43	snR43	CPA2	P03965	1118 aa	Known RBP	2.71	□□□□□ -1.98
snR43	snR43	ADE3	P07245	946 aa	Known RBP	2.71	□□□□□ -1.98
snR43	snR43	RPL19A	P0CX82	189 aa	Known RBP	2.71	□□□□□ -1.98
snR43	snR43	RPL19B	P0CX83	189 aa	Predicted RBP	2.71	□□□□□ -1.98
snR43	snR43	IME1	P21190	360 aa		2.71	□□□□□ -1.98
snR43	snR43	VBA3	P25594	458 aa		2.71	□□□□□ -1.98
snR43	snR43	BMH1	P29311	267 aa	Known RBP	2.71	□□□□□ -1.98
snR43	snR43	RML2	P32611	393 aa		2.71	□□□□□ -1.98
snR43	snR43	SGE1	P33335	543 aa		2.71	□□□□□ -1.98
snR43	snR43	YKL023W	P36103	277 aa	Known RBP	2.71	□□□□□ -1.98
snR43	snR43	MRPL40	P36534	297 aa		2.71	□□□□□ -1.98
snR43	snR43	MAL33	P38157	468 aa		2.71	□□□□□ -1.98
snR43	snR43	PFS1	P38872	237 aa		2.71	□□□□□ -1.98
snR43	snR43	GEM1	P39722	662 aa		2.71	□□□□□ -1.98
snR43	snR43	SPF1	P39986	1215 aa	Known RBP	2.71	□□□□□ -1.98
snR43	snR43	CDC1	P40986	491 aa		2.71	□□□□□ -1.98
snR43	snR43	PYK2	P52489	506 aa	Known RBP	2.71	□□□□□ -1.98
snR43	snR43	VEL1	P53058	206 aa		2.71	□□□□□ -1.98
snR43	snR43	TIM8	P57744	87 aa		2.71	□□□□□ -1.98
snR43	snR43	IWR1	Q07532	353 aa	Predicted RBP	2.71	□□□□□ -1.98
snR43	snR43	ABP140	Q08641	628 aa	Known RBP	2.71	□□□□□ -1.98
snR43	snR43	APC5	Q08683	685 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms