RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB2YPR175W INN1P53901 409 aa6.41□□□□□ -1.38
DPB2YPR175W YMR155WQ03795 547 aa6.41□□□□□ -1.38
DPB2YPR175W SXM1Q04175 944 aaKnown RBP6.41□□□□□ -1.38
DPB2YPR175W RCO1Q04779 684 aa6.41□□□□□ -1.38
DPB2YPR175W TMA16Q08687 178 aa6.41□□□□□ -1.38
DPB2YPR175W PNO1Q99216 274 aaKnown RBP6.41□□□□□ -1.38
DPB2YPR175W ILS1P09436 1072 aaKnown RBP6.41□□□□□ -1.38
DPB2YPR175W GBP2P25555 427 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
DPB2YPR175W YJL193WP39542 402 aa6.41□□□□□ -1.38
DPB2YPR175W YLR352WQ06479 807 aa6.41□□□□□ -1.38
DPB2YPR175W NMD4Q12129 218 aa6.41□□□□□ -1.38
DPB2YPR175W ZRT2Q12436 422 aa6.41□□□□□ -1.38
DPB2YPR175W SKM1Q12469 655 aa6.41□□□□□ -1.38
DPB2YPR175W ATP2P00830 511 aaKnown RBP6.4□□□□□ -1.38
DPB2YPR175W RPP2AP05319 106 aaKnown RBP6.4□□□□□ -1.38
DPB2YPR175W YKL050CP35736 922 aa6.4□□□□□ -1.38
DPB2YPR175W BYE1P36106 594 aa6.4□□□□□ -1.38
DPB2YPR175W MRPL7P36519 292 aa6.4□□□□□ -1.38
DPB2YPR175W IST3P40565 148 aaPredicted RBP6.4□□□□□ -1.38
DPB2YPR175W NGL2Q03264 515 aaKnown RBP6.4□□□□□ -1.38
DPB2YPR175W IZH3Q07959 543 aa6.4□□□□□ -1.38
DPB2YPR175W CHS5Q12114 671 aaKnown RBP6.4□□□□□ -1.38
DPB2YPR175W YLR302CO13544 120 aa6.4□□□□□ -1.39
DPB2YPR175W NAT1P12945 854 aaKnown RBP6.4□□□□□ -1.39
DPB2YPR175W RED1P14291 827 aa6.4□□□□□ -1.39
DPB2YPR175W UBP13P38187 747 aa6.4□□□□□ -1.39
DPB2YPR175W MUP1P50276 574 aa6.4□□□□□ -1.39
DPB2YPR175W YLR345WQ06137 509 aa6.4□□□□□ -1.39
DPB2YPR175W PRS5Q12265 496 aaKnown RBP6.4□□□□□ -1.39
DPB2YPR175W CDC24P11433 854 aaPredicted RBP6.39□□□□□ -1.39
DPB2YPR175W YCR061WP25639 631 aa6.39□□□□□ -1.39
DPB2YPR175W URK1P27515 501 aa6.39□□□□□ -1.39
DPB2YPR175W DSS4P32601 143 aa6.39□□□□□ -1.39
DPB2YPR175W TSA1P34760 196 aaKnown RBP6.39□□□□□ -1.39
DPB2YPR175W YEL057CP39983 233 aa6.39□□□□□ -1.39
DPB2YPR175W VPS4P52917 437 aa6.39□□□□□ -1.39
DPB2YPR175W MED7Q08278 222 aa6.39□□□□□ -1.39
DPB2YPR175W CTI6Q08923 506 aa6.39□□□□□ -1.39
DPB2YPR175W EFT1P32324 842 aaKnown RBP6.38□□□□□ -1.39
DPB2YPR175W APE4P38821 490 aa6.38□□□□□ -1.39
DPB2YPR175W MPS3P47069 682 aa6.38□□□□□ -1.39
DPB2YPR175W MLH3Q12083 715 aa6.38□□□□□ -1.39
DPB2YPR175W YOL159C-AQ3E769 90 aa6.38□□□□□ -1.39
DPB2YPR175W ALY1P36117 915 aa6.38□□□□□ -1.39
DPB2YPR175W LRP1P38801 184 aaKnown RBP6.38□□□□□ -1.39
DPB2YPR175W LYS4P49367 693 aaPredicted RBP6.38□□□□□ -1.39
DPB2YPR175W UBC11P52492 156 aa6.38□□□□□ -1.39
DPB2YPR175W PAN2P53010 1115 aaPredicted RBP6.38□□□□□ -1.39
DPB2YPR175W RTN2Q12443 393 aa6.38□□□□□ -1.39
DPB2YPR175W YOR111WQ99210 232 aa6.38□□□□□ -1.39
DPB2YPR175W GCN4P03069 281 aa6.37□□□□□ -1.39
DPB2YPR175W CAD1P24813 409 aaKnown RBP6.37□□□□□ -1.39
DPB2YPR175W YEL025CP39991 1188 aa6.37□□□□□ -1.39
DPB2YPR175W YIR042CP40586 236 aa6.37□□□□□ -1.39
DPB2YPR175W USA1Q03714 838 aa6.37□□□□□ -1.39
DPB2YPR175W SPE4Q12455 300 aa6.37□□□□□ -1.39
DPB2YPR175W YBR126W-AQ8TGU7 68 aa6.37□□□□□ -1.39
DPB2YPR175W YML003WP0CF16 290 aa6.37□□□□□ -1.39
DPB2YPR175W SEC15P22224 910 aa6.37□□□□□ -1.39
DPB2YPR175W MVD1P32377 396 aaKnown RBP6.37□□□□□ -1.39
DPB2YPR175W PUB1P32588 453 aaKnown RBP RIP-Chip data6.37□□□□□ -1.39not detected
DPB2YPR175W SRO77P38163 1010 aa6.37□□□□□ -1.39
DPB2YPR175W AAD10P47182 288 aa6.37□□□□□ -1.39
DPB2YPR175W IMO32P53219 342 aa6.37□□□□□ -1.39
DPB2YPR175W MUB1Q03162 620 aa6.37□□□□□ -1.39
DPB2YPR175W EFR3Q03653 782 aaKnown RBP6.37□□□□□ -1.39
DPB2YPR175W IRC3Q06683 689 aa6.37□□□□□ -1.39
DPB2YPR175W IRC13Q08630 104 aa6.37□□□□□ -1.39
DPB2YPR175W YPL272CQ08984 517 aa6.37□□□□□ -1.39
DPB2YPR175W GRX6Q12438 231 aa6.37□□□□□ -1.39
DPB2YPR175W DFG16Q99234 619 aa6.37□□□□□ -1.39
DPB2YPR175W CTT1P06115 562 aa6.36□□□□□ -1.39
DPB2YPR175W TRP4P07285 380 aaPredicted RBP6.36□□□□□ -1.39
DPB2YPR175W PDX1P16451 410 aa6.36□□□□□ -1.39
DPB2YPR175W ARO9P38840 513 aaPredicted RBP6.36□□□□□ -1.39
DPB2YPR175W MPT5P39016 859 aaKnown RBP RIP-Chip data6.36□□□□□ -1.39not detected
DPB2YPR175W YML6P51998 286 aa6.36□□□□□ -1.39
DPB2YPR175W SNF12P53628 566 aa6.36□□□□□ -1.39
DPB2YPR175W CRF1Q04930 467 aa6.36□□□□□ -1.39
DPB2YPR175W RIX7Q07844 837 aaKnown RBP6.36□□□□□ -1.39
DPB2YPR175W HSP82P02829 709 aaKnown RBP6.35□□□□□ -1.39
DPB2YPR175W SIR3P06701 978 aa6.35□□□□□ -1.39
DPB2YPR175W PRP28P23394 588 aa6.35□□□□□ -1.39
DPB2YPR175W FLC2P39719 783 aa6.35□□□□□ -1.39
DPB2YPR175W FHN1P53279 174 aa6.35□□□□□ -1.39
DPB2YPR175W RPS15Q01855 142 aaKnown RBP6.35□□□□□ -1.39
DPB2YPR175W YPL108WQ02872 168 aaPredicted RBP6.35□□□□□ -1.39
DPB2YPR175W CPA2P03965 1118 aaKnown RBP6.35□□□□□ -1.39
DPB2YPR175W CAF20P12962 161 aaKnown RBP6.35□□□□□ -1.39
DPB2YPR175W CAP1P28495 268 aaKnown RBP6.35□□□□□ -1.39
DPB2YPR175W YHR097CP38809 366 aaKnown RBP6.35□□□□□ -1.39
DPB2YPR175W JHD1P40034 492 aa6.35□□□□□ -1.39
DPB2YPR175W CIR1P42940 261 aa6.35□□□□□ -1.39
DPB2YPR175W RPC11Q04307 110 aaPredicted RBP6.35□□□□□ -1.39
DPB2YPR175W GET3Q12154 354 aaKnown RBP6.35□□□□□ -1.39
DPB2YPR175W RPS13P05756 151 aaKnown RBP6.34□□□□□ -1.39
DPB2YPR175W SEC12P11655 471 aa6.34□□□□□ -1.39
DPB2YPR175W VPS34P22543 875 aa6.34□□□□□ -1.39
DPB2YPR175W PHO11P35842 467 aa6.34□□□□□ -1.39
DPB2YPR175W PHO12P38693 467 aa6.34□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 112.3 ms