RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB2YPR175W DRS1P32892 752 aaKnown RBP15.59■□□□□ 0.09
DPB2YPR175W MTC1P47018 478 aaKnown RBP14.66□□□□□ -0.06
DPB2YPR175W BFR2Q06631 534 aaKnown RBP13.85□□□□□ -0.19
DPB2YPR175W TFA1P36100 482 aa13.76□□□□□ -0.21
DPB2YPR175W AVT3P36062 692 aa13.18□□□□□ -0.3
DPB2YPR175W DIP2Q12220 943 aaPredicted RBP13□□□□□ -0.33
DPB2YPR175W RQC2Q12532 1038 aaKnown RBP12.23□□□□□ -0.45
DPB2YPR175W RSE1Q04693 1361 aaKnown RBP11.93□□□□□ -0.5
DPB2YPR175W DMA1P38823 416 aa11.69□□□□□ -0.54
DPB2YPR175W ISW2Q08773 1120 aa11.58□□□□□ -0.56
DPB2YPR175W RPG1P38249 964 aaKnown RBP11.51□□□□□ -0.57
DPB2YPR175W RPL17AP05740 184 aaKnown RBP11.47□□□□□ -0.57
DPB2YPR175W RPL17BP46990 184 aaKnown RBP11.47□□□□□ -0.57
DPB2YPR175W TAF7Q05021 590 aa11.4□□□□□ -0.58
DPB2YPR175W PTP3P40048 928 aa11.39□□□□□ -0.59
DPB2YPR175W PRI1P10363 409 aa11.28□□□□□ -0.6
DPB2YPR175W SPT21P35209 758 aa11.28□□□□□ -0.6
DPB2YPR175W RIM101P33400 625 aa11.26□□□□□ -0.61
DPB2YPR175W REB1P21538 810 aa11.15□□□□□ -0.63
DPB2YPR175W SSP1P38871 571 aa11.08□□□□□ -0.63
DPB2YPR175W LEO1P38439 464 aa11.04□□□□□ -0.64
DPB2YPR175W OXP1P28273 1286 aa11.02□□□□□ -0.65
DPB2YPR175W AAD16Q02895 342 aa10.86□□□□□ -0.67
DPB2YPR175W FAP1P53971 965 aa10.85□□□□□ -0.67
DPB2YPR175W YLR271WQ06152 274 aa10.84□□□□□ -0.67
DPB2YPR175W SAS10Q12136 610 aaPredicted RBP10.82□□□□□ -0.68
DPB2YPR175W YAH1Q12184 172 aaKnown RBP10.82□□□□□ -0.68
DPB2YPR175W TSR3Q12094 313 aaKnown RBP10.76□□□□□ -0.69
DPB2YPR175W LEU3P08638 886 aa10.72□□□□□ -0.69
DPB2YPR175W YKR023WP36119 530 aaKnown RBP10.71□□□□□ -0.69
DPB2YPR175W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.67□□□□□ -0.7not detected
DPB2YPR175W MGA2P40578 1113 aa10.59□□□□□ -0.71
DPB2YPR175W YIL055CP40523 627 aaKnown RBP10.59□□□□□ -0.71
DPB2YPR175W CST9Q06032 482 aa10.59□□□□□ -0.71
DPB2YPR175W RSM7P47150 247 aa10.52□□□□□ -0.73
DPB2YPR175W PSD2P53037 1138 aaKnown RBP10.45□□□□□ -0.74
DPB2YPR175W HOP09932 586 aa10.43□□□□□ -0.74
DPB2YPR175W TFC8Q12308 588 aa10.43□□□□□ -0.74
DPB2YPR175W DCD1P06773 312 aa10.4□□□□□ -0.74
DPB2YPR175W DMA2P53924 522 aa10.35□□□□□ -0.75
DPB2YPR175W ABP1P15891 592 aaKnown RBP10.34□□□□□ -0.75
DPB2YPR175W AI2P03876 854 aa10.3□□□□□ -0.76
DPB2YPR175W RAM2P29703 316 aa10.3□□□□□ -0.76
DPB2YPR175W RPN1P38764 993 aaKnown RBP10.27□□□□□ -0.77
DPB2YPR175W CDC27P38042 758 aa10.26□□□□□ -0.77
DPB2YPR175W BCH2P36122 765 aa10.19□□□□□ -0.78
DPB2YPR175W RCR1P38212 213 aa10.19□□□□□ -0.78
DPB2YPR175W YPR148CQ06523 435 aa10.19□□□□□ -0.78
DPB2YPR175W SET1P38827 1080 aaKnown RBP10.18□□□□□ -0.78
DPB2YPR175W MRPL32P25348 183 aa10.16□□□□□ -0.78
DPB2YPR175W PRY3P47033 881 aa10.16□□□□□ -0.78
DPB2YPR175W VPS70P47161 811 aa10.11□□□□□ -0.79
DPB2YPR175W SPB4P25808 606 aaPredicted RBP10.08□□□□□ -0.8
DPB2YPR175W CKB1P43639 278 aa10.05□□□□□ -0.8
DPB2YPR175W MRM1P25270 412 aa10.05□□□□□ -0.8
DPB2YPR175W BBC1P47068 1157 aa10.03□□□□□ -0.8
DPB2YPR175W EPS1P40557 701 aa10.03□□□□□ -0.8
DPB2YPR175W YCK3P39962 524 aa10.01□□□□□ -0.81
DPB2YPR175W DSF2P38213 736 aa10□□□□□ -0.81
DPB2YPR175W BDF1P35817 686 aa9.97□□□□□ -0.81
DPB2YPR175W RLF2Q12495 606 aa9.97□□□□□ -0.81
DPB2YPR175W MAK11P20484 414 aaKnown RBP9.94□□□□□ -0.82
DPB2YPR175W IFH1P39520 1085 aa9.92□□□□□ -0.82
DPB2YPR175W RTG3P38165 486 aa9.91□□□□□ -0.82
DPB2YPR175W PBS2P08018 668 aa9.9□□□□□ -0.82
DPB2YPR175W KIN1P13185 1064 aa9.87□□□□□ -0.83
DPB2YPR175W VPS29P38759 282 aa9.86□□□□□ -0.83
DPB2YPR175W YNR021WP53723 404 aaKnown RBP9.84□□□□□ -0.83
DPB2YPR175W COQ8P27697 501 aa9.83□□□□□ -0.84
DPB2YPR175W GLC3P32775 704 aa9.8□□□□□ -0.84
DPB2YPR175W NUP42P49686 430 aaKnown RBP9.79□□□□□ -0.84
DPB2YPR175W DIT2P21595 489 aa9.78□□□□□ -0.84
DPB2YPR175W SCY1P53009 804 aa9.75□□□□□ -0.85
DPB2YPR175W EDS1P38073 919 aa9.75□□□□□ -0.85
DPB2YPR175W AIM7Q12156 149 aa9.74□□□□□ -0.85
DPB2YPR175W GUA1P38625 525 aaKnown RBP9.73□□□□□ -0.85
DPB2YPR175W IES2P40154 320 aa9.73□□□□□ -0.85
DPB2YPR175W MAM3Q12296 706 aa9.72□□□□□ -0.85
DPB2YPR175W STS1P38637 319 aa9.71□□□□□ -0.86
DPB2YPR175W REF2P42073 533 aaPredicted RBP9.68□□□□□ -0.86
DPB2YPR175W NOP53Q12080 455 aaKnown RBP9.67□□□□□ -0.86
DPB2YPR175W MAP2P38174 421 aaKnown RBP9.65□□□□□ -0.87
DPB2YPR175W MIF2P35201 549 aa9.62□□□□□ -0.87
DPB2YPR175W COX6P00427 148 aa9.6□□□□□ -0.87
DPB2YPR175W YMR1P47147 688 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
DPB2YPR175W YFR006WP43590 535 aa9.58□□□□□ -0.88
DPB2YPR175W HAA1Q12753 694 aaKnown RBP9.57□□□□□ -0.88
DPB2YPR175W DBP1P24784 617 aaKnown RBP9.55□□□□□ -0.88
DPB2YPR175W YDR090CQ03193 310 aa9.54□□□□□ -0.88
DPB2YPR175W PTC3P34221 468 aaKnown RBP9.54□□□□□ -0.88
DPB2YPR175W HPC2Q01448 625 aa9.53□□□□□ -0.88
DPB2YPR175W MAK21Q12176 1025 aaKnown RBP9.53□□□□□ -0.88
DPB2YPR175W UBP10P53874 792 aaPredicted RBP9.52□□□□□ -0.88
DPB2YPR175W TFB3Q03290 321 aa9.52□□□□□ -0.88
DPB2YPR175W PKC1P24583 1151 aa9.49□□□□□ -0.89
DPB2YPR175W UBP14P38237 781 aaKnown RBP9.49□□□□□ -0.89
DPB2YPR175W ATF2P53296 535 aa9.47□□□□□ -0.89
DPB2YPR175W HGH1P48362 394 aaKnown RBP9.45□□□□□ -0.9
DPB2YPR175W SLX5P32828 619 aaKnown RBP9.43□□□□□ -0.9
DPB2YPR175W VHR2P40041 505 aa9.43□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms