RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Cldn16Q925N4 235 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Ifitm2Q99J93 144 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Rpp25lQ99JH1 163 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Slc50a1Q9CXK4 221 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Spaca3Q9D9X8 221 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Znf580Q9DB38 172 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Lsm4Q9QXA5 137 aaKnown RBP6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Tm4sf19E9Q9H8 206 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm6176J3QK59 301 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm4567Q3UTA8 301 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Arrdc5Q497K5 325 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr1386Q7TQT0 309 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Tnfsf18Q7TS55 173 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gatd1Q8BFQ8 220 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr1262Q8VGN2 304 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr577Q8VH11 312 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gtsf1Q9DAN6 167 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 TnxbO35452 4006 aa6.29□□□□□ -1.4
Trim39-205ENSMUST00000173369 Ighv8-4A0A0A6YW26 117 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Olfr748E9Q9Z0 307 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 A930009A15RikG3UYI6 118 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm21732J3QM79 361 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Efnb3O35393 340 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 P01748 117 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm16686Q3UMN9 131 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trav15-1-dv6-1Q5R1D2 117 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Wdr83osQ6ZWX0 106 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Lhfpl1Q80SV1 220 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Trpt1Q8K3A2 249 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Slamf6Q9ET39 351 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Ighv8-8A0A0A6YXQ0 119 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Gm20422E9PUR3 255 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 P01674 108 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 P01792 123 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Pmis2Q497Q9 96 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Wfdc15aQ8BH89 80 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Map1lc3aQ91VR7 121 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Tmem70Q921N7 253 aa6.28□□□□□ -1.4
Trim39-205ENSMUST00000173369 Ighv1-39A0A075B5V5 117 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ighv5-16A0A0B4J1P4 117 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ighv1-77A0A0G2JGS9 117 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Zfp930A0A1D5RM15 441 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Samd13D3YUG0 102 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 CrygbP04344 175 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Glrx2Q923X4 156 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Mrpl32Q9DCI9 187 aaKnown RBP6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 PigpQ9JHG1 132 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ighv2-7A0A075B5Q8 116 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Trav9-2A0A075B647 113 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Trav12-3A0A075B648 115 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ighv1-52A0A0A6YXC3 117 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Trbv5A0A0B4J1G9 113 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Trav9-4A0A0B4J1K2 113 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm26965M0QWH4 86 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 MdfiP70331 251 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Olfr1419Q7TQS2 343 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Tnfrsf13cQ9D8D0 175 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Rabac1Q9Z0S9 185 aa6.27□□□□□ -1.41
Trim39-205ENSMUST00000173369 Klk1b4P00757 256 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ssty1P13675 232 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 MgpP19788 104 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Cml3Q9JIY8 226 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ighv1-80A0A075B5Y3 117 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Tac3P55099 116 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Fxyd7P59648 80 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 SNORCQ9CXL7 121 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Stab2Q8R4U0 2559 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Trav6n-6A0A075B6B2 114 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Igkv1-133A0A0B4J1H8 120 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Olfr912A0A1L1SSS5 310 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Amn1B8JKV0 258 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm3443F7CCV5 94 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 A630076J17RikJ3QQ32 107 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 CampP51437 172 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm16223Q8CBM3 117 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Tctex1d4Q8CDY7 219 aa6.26□□□□□ -1.41
Trim39-205ENSMUST00000173369 Igkv4-57-1A0A075B5M4 119 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ighv3-8A0A075B5T0 131 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 AU041133A0A0J9YVH3 498 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm10638F6QEG2 257 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm21775J3KMK6 180 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Reg3gO09049 174 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 LhbO09108 141 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Rps28P62858 69 aaKnown RBP6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Cox7a2lQ61387 111 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 March3Q8BRX9 218 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Tmem101Q91VP7 257 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Psmg3Q9CZH3 122 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Try5Q9QUK9 246 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Try4Q9R0T7 246 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Trav6-6A0A075B603 114 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Defa30E9QPZ2 93 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Spink11Q09TK7 88 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm904Q3V2L5 102 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Q4KKZ1 196 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Cd200r3Q5UKY4 296 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Gm12689Q8BQU9 117 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Bub3Q9WVA3 326 aa6.25□□□□□ -1.41
Trim39-205ENSMUST00000173369 Ighv9-4A0A0A6YWH6 117 aa6.24□□□□□ -1.41
Trim39-205ENSMUST00000173369 H2al2bA9Z055 111 aa6.24□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 97 ms