Protein–RNA interactions for Protein: Q8K3A2

Trpt1, tRNA 2'-phosphotransferase 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpt1Q8K3A2 Gm25239-201ENSMUST00000174915 86 ntBASIC27.15■■□□□ 1.94
Trpt1Q8K3A2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trpt1Q8K3A2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trpt1Q8K3A2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
Trpt1Q8K3A2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Trpt1Q8K3A2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Trpt1Q8K3A2 Psd-208ENSMUST00000224556 2034 ntBASIC24.32■■□□□ 1.48
Trpt1Q8K3A2 Gm15042-201ENSMUST00000120212 883 ntBASIC24.2■■□□□ 1.46
Trpt1Q8K3A2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Trpt1Q8K3A2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Trpt1Q8K3A2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Trpt1Q8K3A2 Gm15045-201ENSMUST00000117359 883 ntBASIC23.74■■□□□ 1.39
Trpt1Q8K3A2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trpt1Q8K3A2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC23.47■■□□□ 1.35
Trpt1Q8K3A2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trpt1Q8K3A2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Trpt1Q8K3A2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trpt1Q8K3A2 Gm24109-201ENSMUST00000175489 103 ntBASIC23.32■■□□□ 1.32
Trpt1Q8K3A2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Trpt1Q8K3A2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Trpt1Q8K3A2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trpt1Q8K3A2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trpt1Q8K3A2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trpt1Q8K3A2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Trpt1Q8K3A2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Trpt1Q8K3A2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Trpt1Q8K3A2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Trpt1Q8K3A2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.81■■□□□ 1.24
Trpt1Q8K3A2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Trpt1Q8K3A2 Gm23366-201ENSMUST00000175022 89 ntBASIC22.74■■□□□ 1.23
Trpt1Q8K3A2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Trpt1Q8K3A2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Trpt1Q8K3A2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Trpt1Q8K3A2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.62■■□□□ 1.21
Trpt1Q8K3A2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Trpt1Q8K3A2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Trpt1Q8K3A2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Trpt1Q8K3A2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Trpt1Q8K3A2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trpt1Q8K3A2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trpt1Q8K3A2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Trpt1Q8K3A2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Trpt1Q8K3A2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC22.3■■□□□ 1.16
Trpt1Q8K3A2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC22.23■■□□□ 1.15
Trpt1Q8K3A2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Trpt1Q8K3A2 Gm10524-201ENSMUST00000181931 1893 ntBASIC22.21■■□□□ 1.15
Trpt1Q8K3A2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.2■■□□□ 1.14
Trpt1Q8K3A2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trpt1Q8K3A2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Trpt1Q8K3A2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trpt1Q8K3A2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Trpt1Q8K3A2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trpt1Q8K3A2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trpt1Q8K3A2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.83■■□□□ 1.09
Trpt1Q8K3A2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trpt1Q8K3A2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Trpt1Q8K3A2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trpt1Q8K3A2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trpt1Q8K3A2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trpt1Q8K3A2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.66■■□□□ 1.06
Trpt1Q8K3A2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Trpt1Q8K3A2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpt1Q8K3A2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Trpt1Q8K3A2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Trpt1Q8K3A2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trpt1Q8K3A2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Trpt1Q8K3A2 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.53■■□□□ 1.04
Trpt1Q8K3A2 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.52■■□□□ 1.04
Trpt1Q8K3A2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Trpt1Q8K3A2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Trpt1Q8K3A2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trpt1Q8K3A2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Trpt1Q8K3A2 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trpt1Q8K3A2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Trpt1Q8K3A2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Trpt1Q8K3A2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Trpt1Q8K3A2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Trpt1Q8K3A2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Trpt1Q8K3A2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpt1Q8K3A2 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trpt1Q8K3A2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trpt1Q8K3A2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trpt1Q8K3A2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.29■■□□□ 1
Trpt1Q8K3A2 Gm27325-201ENSMUST00000175467 74 ntBASIC21.29■■□□□ 1
Trpt1Q8K3A2 Gm25238-201ENSMUST00000174914 89 ntBASIC21.27■■□□□ 1
Trpt1Q8K3A2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trpt1Q8K3A2 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Trpt1Q8K3A2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC21.2■□□□□ 0.98
Trpt1Q8K3A2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trpt1Q8K3A2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trpt1Q8K3A2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Trpt1Q8K3A2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.09■□□□□ 0.97
Trpt1Q8K3A2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Trpt1Q8K3A2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trpt1Q8K3A2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trpt1Q8K3A2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trpt1Q8K3A2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Trpt1Q8K3A2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trpt1Q8K3A2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trpt1Q8K3A2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms