Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Gm25239-201ENSMUST00000174915 86 ntBASIC25.79■■□□□ 1.72
Cml3Q9JIY8 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cml3Q9JIY8 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
Cml3Q9JIY8 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Cml3Q9JIY8 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Cml3Q9JIY8 Psd-208ENSMUST00000224556 2034 ntBASIC24.19■■□□□ 1.46
Cml3Q9JIY8 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cml3Q9JIY8 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Cml3Q9JIY8 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Cml3Q9JIY8 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Cml3Q9JIY8 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Cml3Q9JIY8 Gm15042-201ENSMUST00000120212 883 ntBASIC23.2■■□□□ 1.3
Cml3Q9JIY8 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cml3Q9JIY8 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Cml3Q9JIY8 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Cml3Q9JIY8 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cml3Q9JIY8 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC22.91■■□□□ 1.26
Cml3Q9JIY8 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Cml3Q9JIY8 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Cml3Q9JIY8 Gm15045-201ENSMUST00000117359 883 ntBASIC22.76■■□□□ 1.23
Cml3Q9JIY8 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cml3Q9JIY8 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cml3Q9JIY8 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cml3Q9JIY8 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Cml3Q9JIY8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Cml3Q9JIY8 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cml3Q9JIY8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
Cml3Q9JIY8 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cml3Q9JIY8 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cml3Q9JIY8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cml3Q9JIY8 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cml3Q9JIY8 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cml3Q9JIY8 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cml3Q9JIY8 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC22.22■■□□□ 1.15
Cml3Q9JIY8 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cml3Q9JIY8 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC22.12■■□□□ 1.13
Cml3Q9JIY8 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cml3Q9JIY8 Gm24109-201ENSMUST00000175489 103 ntBASIC22.02■■□□□ 1.12
Cml3Q9JIY8 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC21.98■■□□□ 1.11
Cml3Q9JIY8 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cml3Q9JIY8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cml3Q9JIY8 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cml3Q9JIY8 Gm42596-201ENSMUST00000196305 1958 ntBASIC21.9■■□□□ 1.1
Cml3Q9JIY8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cml3Q9JIY8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cml3Q9JIY8 Gm10524-201ENSMUST00000181931 1893 ntBASIC21.79■■□□□ 1.08
Cml3Q9JIY8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC21.76■■□□□ 1.07
Cml3Q9JIY8 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC21.76■■□□□ 1.07
Cml3Q9JIY8 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cml3Q9JIY8 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cml3Q9JIY8 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cml3Q9JIY8 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cml3Q9JIY8 Gm23366-201ENSMUST00000175022 89 ntBASIC21.67■■□□□ 1.06
Cml3Q9JIY8 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cml3Q9JIY8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cml3Q9JIY8 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cml3Q9JIY8 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cml3Q9JIY8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cml3Q9JIY8 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cml3Q9JIY8 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cml3Q9JIY8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Cml3Q9JIY8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cml3Q9JIY8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cml3Q9JIY8 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cml3Q9JIY8 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.32■■□□□ 1
Cml3Q9JIY8 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cml3Q9JIY8 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC21.29■■□□□ 1
Cml3Q9JIY8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cml3Q9JIY8 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cml3Q9JIY8 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Cml3Q9JIY8 CT025624.2-201ENSMUST00000223609 1909 ntBASIC21.19■□□□□ 0.98
Cml3Q9JIY8 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cml3Q9JIY8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Cml3Q9JIY8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Cml3Q9JIY8 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cml3Q9JIY8 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cml3Q9JIY8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cml3Q9JIY8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cml3Q9JIY8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cml3Q9JIY8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cml3Q9JIY8 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cml3Q9JIY8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cml3Q9JIY8 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cml3Q9JIY8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cml3Q9JIY8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Cml3Q9JIY8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cml3Q9JIY8 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Cml3Q9JIY8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cml3Q9JIY8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cml3Q9JIY8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cml3Q9JIY8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.77■□□□□ 0.92
Cml3Q9JIY8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cml3Q9JIY8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cml3Q9JIY8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cml3Q9JIY8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cml3Q9JIY8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.66■□□□□ 0.9
Cml3Q9JIY8 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.62■□□□□ 0.89
Cml3Q9JIY8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cml3Q9JIY8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cml3Q9JIY8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms