Protein–RNA interactions for Protein: A0A0A6YWH6

Ighv9-4, Immunoglobulin heavy variable 9-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv9-4A0A0A6YWH6 Gm25239-201ENSMUST00000174915 86 ntBASIC28.01■■■□□ 2.07
Ighv9-4A0A0A6YWH6 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Ighv9-4A0A0A6YWH6 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Ighv9-4A0A0A6YWH6 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ighv9-4A0A0A6YWH6 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ighv9-4A0A0A6YWH6 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ighv9-4A0A0A6YWH6 Psd-208ENSMUST00000224556 2034 ntBASIC25.34■■□□□ 1.65
Ighv9-4A0A0A6YWH6 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ighv9-4A0A0A6YWH6 Gm15042-201ENSMUST00000120212 883 ntBASIC24.82■■□□□ 1.56
Ighv9-4A0A0A6YWH6 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ighv9-4A0A0A6YWH6 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ighv9-4A0A0A6YWH6 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ighv9-4A0A0A6YWH6 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ighv9-4A0A0A6YWH6 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ighv9-4A0A0A6YWH6 Gm15045-201ENSMUST00000117359 883 ntBASIC24.25■■□□□ 1.47
Ighv9-4A0A0A6YWH6 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ighv9-4A0A0A6YWH6 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ighv9-4A0A0A6YWH6 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC24.13■■□□□ 1.45
Ighv9-4A0A0A6YWH6 Gm24109-201ENSMUST00000175489 103 ntBASIC24.08■■□□□ 1.45
Ighv9-4A0A0A6YWH6 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ighv9-4A0A0A6YWH6 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ighv9-4A0A0A6YWH6 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ighv9-4A0A0A6YWH6 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ighv9-4A0A0A6YWH6 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ighv9-4A0A0A6YWH6 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Ighv9-4A0A0A6YWH6 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ighv9-4A0A0A6YWH6 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ighv9-4A0A0A6YWH6 Gm23366-201ENSMUST00000175022 89 ntBASIC23.48■■□□□ 1.35
Ighv9-4A0A0A6YWH6 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Ighv9-4A0A0A6YWH6 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ighv9-4A0A0A6YWH6 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC23.44■■□□□ 1.34
Ighv9-4A0A0A6YWH6 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ighv9-4A0A0A6YWH6 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ighv9-4A0A0A6YWH6 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC23.34■■□□□ 1.33
Ighv9-4A0A0A6YWH6 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ighv9-4A0A0A6YWH6 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ighv9-4A0A0A6YWH6 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ighv9-4A0A0A6YWH6 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ighv9-4A0A0A6YWH6 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ighv9-4A0A0A6YWH6 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.19■■□□□ 1.3
Ighv9-4A0A0A6YWH6 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ighv9-4A0A0A6YWH6 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ighv9-4A0A0A6YWH6 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ighv9-4A0A0A6YWH6 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.07■■□□□ 1.28
Ighv9-4A0A0A6YWH6 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Ighv9-4A0A0A6YWH6 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC23.01■■□□□ 1.27
Ighv9-4A0A0A6YWH6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Ighv9-4A0A0A6YWH6 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Ighv9-4A0A0A6YWH6 AC153911.1-202ENSMUST00000218534 1034 ntBASIC22.79■■□□□ 1.24
Ighv9-4A0A0A6YWH6 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ighv9-4A0A0A6YWH6 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ighv9-4A0A0A6YWH6 Gm42596-201ENSMUST00000196305 1958 ntBASIC22.6■■□□□ 1.21
Ighv9-4A0A0A6YWH6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
Ighv9-4A0A0A6YWH6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.57■■□□□ 1.2
Ighv9-4A0A0A6YWH6 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ighv9-4A0A0A6YWH6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Ighv9-4A0A0A6YWH6 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv9-4A0A0A6YWH6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ighv9-4A0A0A6YWH6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Ighv9-4A0A0A6YWH6 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ighv9-4A0A0A6YWH6 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Ighv9-4A0A0A6YWH6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Ighv9-4A0A0A6YWH6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Ighv9-4A0A0A6YWH6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC22.33■■□□□ 1.16
Ighv9-4A0A0A6YWH6 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Ighv9-4A0A0A6YWH6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Ighv9-4A0A0A6YWH6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Ighv9-4A0A0A6YWH6 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC22.28■■□□□ 1.16
Ighv9-4A0A0A6YWH6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ighv9-4A0A0A6YWH6 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ighv9-4A0A0A6YWH6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ighv9-4A0A0A6YWH6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Ighv9-4A0A0A6YWH6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Ighv9-4A0A0A6YWH6 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
Ighv9-4A0A0A6YWH6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ighv9-4A0A0A6YWH6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Ighv9-4A0A0A6YWH6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
Ighv9-4A0A0A6YWH6 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Ighv9-4A0A0A6YWH6 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Ighv9-4A0A0A6YWH6 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
Ighv9-4A0A0A6YWH6 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.01■■□□□ 1.11
Ighv9-4A0A0A6YWH6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ighv9-4A0A0A6YWH6 Gm25238-201ENSMUST00000174914 89 ntBASIC21.97■■□□□ 1.11
Ighv9-4A0A0A6YWH6 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ighv9-4A0A0A6YWH6 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
Ighv9-4A0A0A6YWH6 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ighv9-4A0A0A6YWH6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ighv9-4A0A0A6YWH6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ighv9-4A0A0A6YWH6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ighv9-4A0A0A6YWH6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Ighv9-4A0A0A6YWH6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ighv9-4A0A0A6YWH6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ighv9-4A0A0A6YWH6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ighv9-4A0A0A6YWH6 Gm27325-201ENSMUST00000175467 74 ntBASIC21.77■■□□□ 1.08
Ighv9-4A0A0A6YWH6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ighv9-4A0A0A6YWH6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ighv9-4A0A0A6YWH6 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC21.7■■□□□ 1.06
Ighv9-4A0A0A6YWH6 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC21.69■■□□□ 1.06
Ighv9-4A0A0A6YWH6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ighv9-4A0A0A6YWH6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms