RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 P01725 110 aa14.87□□□□□ -0.03
Trim71-201ENSMUST00000111816 Cdkn2aQ64364 169 aa14.87□□□□□ -0.03
Trim71-201ENSMUST00000111816 Ndufb4Q9CQC7 129 aa14.87□□□□□ -0.03
Trim71-201ENSMUST00000111816 Ndufa4Q62425 82 aaKnown RBP14.87□□□□□ -0.03
Trim71-201ENSMUST00000111816 Znf22Q9ERU3 237 aa14.87□□□□□ -0.03
Trim71-201ENSMUST00000111816 P01837 106 aa14.87□□□□□ -0.03
Trim71-201ENSMUST00000111816 NpwA0A1L1STR8 176 aa14.87□□□□□ -0.03
Trim71-201ENSMUST00000111816 Igkv8-18A0A0B4J1J3 123 aa14.86□□□□□ -0.03
Trim71-201ENSMUST00000111816 Ube2d2bQ6ZWY6 147 aa14.86□□□□□ -0.03
Trim71-201ENSMUST00000111816 Pygo2Q80V76 405 aa14.86□□□□□ -0.03
Trim71-201ENSMUST00000111816 Tctex1d4Q8CDY7 219 aa14.86□□□□□ -0.03
Trim71-201ENSMUST00000111816 P01675 107 aa14.86□□□□□ -0.03
Trim71-201ENSMUST00000111816 P01676 107 aa14.86□□□□□ -0.03
Trim71-201ENSMUST00000111816 P01677 107 aa14.86□□□□□ -0.03
Trim71-201ENSMUST00000111816 P01678 107 aa14.86□□□□□ -0.03
Trim71-201ENSMUST00000111816 Olfr313Q5NC55 308 aa14.86□□□□□ -0.03
Trim71-201ENSMUST00000111816 PcolceQ61398 468 aa14.85□□□□□ -0.03
Trim71-201ENSMUST00000111816 Olfr312Q7TRZ9 308 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 Slc25a29Q8BL03 306 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 Trav12-3A0A075B648 115 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 SelenowP63300 88 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 Defb30Q30KN4 75 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 Gm27027S4R1M6 97 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 Igkv9-124A0A0G2JDR3 117 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 Folr2Q05685 251 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 Msrb2Q78J03 175 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 Ube2e2Q91W82 201 aa14.84□□□□□ -0.03
Trim71-201ENSMUST00000111816 Ighv1-39A0A075B5V5 117 aa14.83□□□□□ -0.04
Trim71-201ENSMUST00000111816 Pygo1Q9D0P5 417 aa14.83□□□□□ -0.04
Trim71-201ENSMUST00000111816 Trav14-1A0A0G2JF94 121 aa14.83□□□□□ -0.04
Trim71-201ENSMUST00000111816 Igf2rQ07113 2483 aaKnown RBP14.83□□□□□ -0.04
Trim71-201ENSMUST00000111816 Lrp4Q8VI56 1905 aa14.83□□□□□ -0.04
Trim71-201ENSMUST00000111816 Psmb8P28063 276 aa14.83□□□□□ -0.04
Trim71-201ENSMUST00000111816 Vpreb3D3Z6J4 130 aa14.83□□□□□ -0.04
Trim71-201ENSMUST00000111816 Notch2O35516 2470 aa14.82□□□□□ -0.04
Trim71-201ENSMUST00000111816 Lst1O08843 95 aa14.82□□□□□ -0.04
Trim71-201ENSMUST00000111816 Bub3Q9WVA3 326 aa14.82□□□□□ -0.04
Trim71-201ENSMUST00000111816 Igkv13-85A0A075B666 115 aa14.82□□□□□ -0.04
Trim71-201ENSMUST00000111816 Gm26602M0QWA4 95 aa14.82□□□□□ -0.04
Trim71-201ENSMUST00000111816 Naa38Q9D2U5 125 aa14.82□□□□□ -0.04
Trim71-201ENSMUST00000111816 Sptbn4E9PX29 2561 aa14.82□□□□□ -0.04
Trim71-201ENSMUST00000111816 Gm10775Q3V290 127 aa14.81□□□□□ -0.04
Trim71-201ENSMUST00000111816 Cr2P19070 1025 aa14.81□□□□□ -0.04
Trim71-201ENSMUST00000111816 Defb47Q30KN1 79 aa14.81□□□□□ -0.04
Trim71-201ENSMUST00000111816 Defb29Q8BGW9 78 aa14.81□□□□□ -0.04
Trim71-201ENSMUST00000111816 Igkv1-122A0A140T8M9 119 aa14.81□□□□□ -0.04
Trim71-201ENSMUST00000111816 Efna4O08542 206 aa14.81□□□□□ -0.04
Trim71-201ENSMUST00000111816 Sdhaf1Q3U276 118 aa14.81□□□□□ -0.04
Trim71-201ENSMUST00000111816 Col9a3A2ACT7 680 aa14.81□□□□□ -0.04
Trim71-201ENSMUST00000111816 Lynx1P0DP60 116 aa14.81□□□□□ -0.04
Trim71-201ENSMUST00000111816 Mrps21P58059 87 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Ang3P97802 145 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Igf1P05017 153 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 NpsP0C0P8 89 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Ube2aQ9Z255 152 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Stpg1Q9D2F5 341 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Kmt2bO08550 2713 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Gata4Q08369 441 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Kiaa1549Q68FD9 1940 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Cbln3Q9JHG0 197 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Ccl6P27784 116 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Klk11Q9QYN3 276 aa14.8□□□□□ -0.04
Trim71-201ENSMUST00000111816 Ighv1-81A0A075B5Y4 117 aa14.79□□□□□ -0.04
Trim71-201ENSMUST00000111816 E030025P04RikA2A6V5 185 aa14.79□□□□□ -0.04
Trim71-201ENSMUST00000111816 Ighv5-9-1A0A0A6YVS4 126 aa14.79□□□□□ -0.04
Trim71-201ENSMUST00000111816 Ormdl1Q921I0 153 aa14.79□□□□□ -0.04
Trim71-201ENSMUST00000111816 Dcaf12l1Q8CBW4 501 aa14.79□□□□□ -0.04
Trim71-201ENSMUST00000111816 P03980 138 aa14.79□□□□□ -0.04
Trim71-201ENSMUST00000111816 Foxf1Q61080 378 aa14.78□□□□□ -0.04
Trim71-201ENSMUST00000111816 P0C1Z5 52 aa14.78□□□□□ -0.04
Trim71-201ENSMUST00000111816 P18532 116 aa14.78□□□□□ -0.04
Trim71-201ENSMUST00000111816 Cd59bP58019 129 aa14.78□□□□□ -0.04
Trim71-201ENSMUST00000111816 Wdr86D3Z757 380 aa14.78□□□□□ -0.04
Trim71-201ENSMUST00000111816 Igh-VJ558P01758 117 aa14.78□□□□□ -0.04
Trim71-201ENSMUST00000111816 Rpp25lQ99JH1 163 aa14.78□□□□□ -0.04
Trim71-201ENSMUST00000111816 Gm815Q3UWS2 115 aa14.78□□□□□ -0.04
Trim71-201ENSMUST00000111816 Defb12Q8K4N3 78 aa14.77□□□□□ -0.04
Trim71-201ENSMUST00000111816 Gm10295Q8CCF3 114 aa14.77□□□□□ -0.04
Trim71-201ENSMUST00000111816 Ighv1-31A0A0A6YWK5 117 aa14.77□□□□□ -0.05
Trim71-201ENSMUST00000111816 H2al1mQ9DAD9 105 aa14.77□□□□□ -0.05
Trim71-201ENSMUST00000111816 Tcl1b2P56841 117 aa14.77□□□□□ -0.05
Trim71-201ENSMUST00000111816 Gtsf1Q9DAN6 167 aa14.77□□□□□ -0.05
Trim71-201ENSMUST00000111816 Tpsg1Q9QUL7 311 aa14.77□□□□□ -0.05
Trim71-201ENSMUST00000111816 Trav7-6A0A075B640 112 aa14.76□□□□□ -0.05
Trim71-201ENSMUST00000111816 Igkv19-93A0A0G2JFZ3 115 aa14.76□□□□□ -0.05
Trim71-201ENSMUST00000111816 Pax9P47242 342 aa14.76□□□□□ -0.05
Trim71-201ENSMUST00000111816 Ang4Q3TMQ6 144 aa14.76□□□□□ -0.05
Trim71-201ENSMUST00000111816 Foxi2Q3I5G5 311 aa14.75□□□□□ -0.05
Trim71-201ENSMUST00000111816 AngP21570 145 aa14.75□□□□□ -0.05
Trim71-201ENSMUST00000111816 P01756 117 aa14.75□□□□□ -0.05
Trim71-201ENSMUST00000111816 P01757 117 aa14.75□□□□□ -0.05
Trim71-201ENSMUST00000111816 Alms1Q8K4E0 3251 aa14.75□□□□□ -0.05
Trim71-201ENSMUST00000111816 Cox17P56394 63 aa14.75□□□□□ -0.05
Trim71-201ENSMUST00000111816 4930447F04RikA2AFR2 126 aa14.75□□□□□ -0.05
Trim71-201ENSMUST00000111816 Ighv6-7A0A0A6YWU3 119 aa14.75□□□□□ -0.05
Trim71-201ENSMUST00000111816 Gm10912Q3UXH0 145 aa14.75□□□□□ -0.05
Trim71-201ENSMUST00000111816 Gm20499D3Z4G5 72 aa14.74□□□□□ -0.05
Trim71-201ENSMUST00000111816 Rmi2Q3UPE3 149 aa14.74□□□□□ -0.05
Trim71-201ENSMUST00000111816 Cxcl13O55038 109 aa14.74□□□□□ -0.05
Trim71-201ENSMUST00000111816 Pate4Q09098 99 aa14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 62.9 ms