Protein–RNA interactions for Protein: A0A0A6YWK5

Ighv1-31, Immunoglobulin heavy variable 1-31 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-31A0A0A6YWK5 Gm25239-201ENSMUST00000174915 86 ntBASIC30.97■■■□□ 2.55
Ighv1-31A0A0A6YWK5 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
Ighv1-31A0A0A6YWK5 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Ighv1-31A0A0A6YWK5 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Ighv1-31A0A0A6YWK5 Gm15042-201ENSMUST00000120212 883 ntBASIC27.25■■□□□ 1.95
Ighv1-31A0A0A6YWK5 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Ighv1-31A0A0A6YWK5 Gm24109-201ENSMUST00000175489 103 ntBASIC26.74■■□□□ 1.87
Ighv1-31A0A0A6YWK5 Gm15045-201ENSMUST00000117359 883 ntBASIC26.65■■□□□ 1.86
Ighv1-31A0A0A6YWK5 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
Ighv1-31A0A0A6YWK5 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Ighv1-31A0A0A6YWK5 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ighv1-31A0A0A6YWK5 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26■■□□□ 1.75
Ighv1-31A0A0A6YWK5 Gm23366-201ENSMUST00000175022 89 ntBASIC25.92■■□□□ 1.74
Ighv1-31A0A0A6YWK5 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ighv1-31A0A0A6YWK5 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ighv1-31A0A0A6YWK5 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC25.55■■□□□ 1.68
Ighv1-31A0A0A6YWK5 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ighv1-31A0A0A6YWK5 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
Ighv1-31A0A0A6YWK5 Psd-208ENSMUST00000224556 2034 ntBASIC25.31■■□□□ 1.64
Ighv1-31A0A0A6YWK5 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ighv1-31A0A0A6YWK5 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ighv1-31A0A0A6YWK5 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
Ighv1-31A0A0A6YWK5 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Ighv1-31A0A0A6YWK5 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ighv1-31A0A0A6YWK5 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ighv1-31A0A0A6YWK5 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ighv1-31A0A0A6YWK5 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25■■□□□ 1.59
Ighv1-31A0A0A6YWK5 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC24.96■■□□□ 1.59
Ighv1-31A0A0A6YWK5 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ighv1-31A0A0A6YWK5 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC24.76■■□□□ 1.55
Ighv1-31A0A0A6YWK5 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ighv1-31A0A0A6YWK5 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
Ighv1-31A0A0A6YWK5 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC24.58■■□□□ 1.53
Ighv1-31A0A0A6YWK5 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ighv1-31A0A0A6YWK5 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ighv1-31A0A0A6YWK5 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ighv1-31A0A0A6YWK5 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ighv1-31A0A0A6YWK5 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ighv1-31A0A0A6YWK5 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.39■■□□□ 1.49
Ighv1-31A0A0A6YWK5 Gm25238-201ENSMUST00000174914 89 ntBASIC24.38■■□□□ 1.49
Ighv1-31A0A0A6YWK5 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Ighv1-31A0A0A6YWK5 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC24.16■■□□□ 1.46
Ighv1-31A0A0A6YWK5 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ighv1-31A0A0A6YWK5 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ighv1-31A0A0A6YWK5 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ighv1-31A0A0A6YWK5 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Ighv1-31A0A0A6YWK5 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ighv1-31A0A0A6YWK5 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.95■■□□□ 1.42
Ighv1-31A0A0A6YWK5 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC23.93■■□□□ 1.42
Ighv1-31A0A0A6YWK5 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ighv1-31A0A0A6YWK5 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC23.91■■□□□ 1.42
Ighv1-31A0A0A6YWK5 Gm27325-201ENSMUST00000175467 74 ntBASIC23.9■■□□□ 1.42
Ighv1-31A0A0A6YWK5 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ighv1-31A0A0A6YWK5 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ighv1-31A0A0A6YWK5 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ighv1-31A0A0A6YWK5 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.69■■□□□ 1.38
Ighv1-31A0A0A6YWK5 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.69■■□□□ 1.38
Ighv1-31A0A0A6YWK5 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ighv1-31A0A0A6YWK5 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.63■■□□□ 1.37
Ighv1-31A0A0A6YWK5 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ighv1-31A0A0A6YWK5 Gm10524-201ENSMUST00000181931 1893 ntBASIC23.62■■□□□ 1.37
Ighv1-31A0A0A6YWK5 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ighv1-31A0A0A6YWK5 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ighv1-31A0A0A6YWK5 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
Ighv1-31A0A0A6YWK5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
Ighv1-31A0A0A6YWK5 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ighv1-31A0A0A6YWK5 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ighv1-31A0A0A6YWK5 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ighv1-31A0A0A6YWK5 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ighv1-31A0A0A6YWK5 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ighv1-31A0A0A6YWK5 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ighv1-31A0A0A6YWK5 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Ighv1-31A0A0A6YWK5 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ighv1-31A0A0A6YWK5 Rab21-202ENSMUST00000218831 843 ntBASIC23.37■■□□□ 1.33
Ighv1-31A0A0A6YWK5 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Ighv1-31A0A0A6YWK5 CT025624.2-201ENSMUST00000223609 1909 ntBASIC23.31■■□□□ 1.32
Ighv1-31A0A0A6YWK5 Gm25262-201ENSMUST00000174934 133 ntBASIC23.3■■□□□ 1.32
Ighv1-31A0A0A6YWK5 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.27■■□□□ 1.32
Ighv1-31A0A0A6YWK5 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC23.27■■□□□ 1.32
Ighv1-31A0A0A6YWK5 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ighv1-31A0A0A6YWK5 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ighv1-31A0A0A6YWK5 Gm42596-201ENSMUST00000196305 1958 ntBASIC23.21■■□□□ 1.31
Ighv1-31A0A0A6YWK5 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ighv1-31A0A0A6YWK5 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ighv1-31A0A0A6YWK5 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ighv1-31A0A0A6YWK5 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Ighv1-31A0A0A6YWK5 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Ighv1-31A0A0A6YWK5 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Ighv1-31A0A0A6YWK5 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC23■■□□□ 1.27
Ighv1-31A0A0A6YWK5 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Ighv1-31A0A0A6YWK5 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22.99■■□□□ 1.27
Ighv1-31A0A0A6YWK5 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Ighv1-31A0A0A6YWK5 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.9■■□□□ 1.26
Ighv1-31A0A0A6YWK5 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Ighv1-31A0A0A6YWK5 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ighv1-31A0A0A6YWK5 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ighv1-31A0A0A6YWK5 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ighv1-31A0A0A6YWK5 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ighv1-31A0A0A6YWK5 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.83■■□□□ 1.25
Ighv1-31A0A0A6YWK5 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.81■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms