RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 HUWE1Q7Z6Z7 4374 aaKnown RBP2.73□□□□□ -1.97
SAMMSON-213ENST00000641336 PRKDCP78527 4128 aaKnown RBP2.73□□□□□ -1.97
SAMMSON-213ENST00000641336 Q6ZSA8 131 aa2.73□□□□□ -1.97
SAMMSON-213ENST00000641336 MMP24-AS1A0A0U1RRL7 71 aa2.72□□□□□ -1.97
SAMMSON-213ENST00000641336 K7EIL1 84 aa2.72□□□□□ -1.97
SAMMSON-213ENST00000641336 IGFL1Q6UW32 110 aa2.72□□□□□ -1.97
SAMMSON-213ENST00000641336 KRTAP12-2P59991 146 aa2.7□□□□□ -1.98
SAMMSON-213ENST00000641336 UBE2DNLQ8IWF7 75 aa2.7□□□□□ -1.98
SAMMSON-213ENST00000641336 DYNC2H1Q8NCM8 4307 aaKnown RBP2.7□□□□□ -1.98
SAMMSON-213ENST00000641336 KMT2CQ8NEZ4 4911 aaKnown RBP2.69□□□□□ -1.98
SAMMSON-213ENST00000641336 PP632Q6XCG6 107 aa2.68□□□□□ -1.98
SAMMSON-213ENST00000641336 ALMS1Q8TCU4 4167 aa2.68□□□□□ -1.98
SAMMSON-213ENST00000641336 DNAH9Q9NYC9 4486 aa2.68□□□□□ -1.98
SAMMSON-213ENST00000641336 RYR3Q15413 4870 aa2.68□□□□□ -1.98
SAMMSON-213ENST00000641336 H1FX-AS1Q4G0G2 97 aa2.68□□□□□ -1.98
SAMMSON-213ENST00000641336 KRTAP5-8O75690 187 aa2.67□□□□□ -1.98
SAMMSON-213ENST00000641336 KRTAP10-8P60410 259 aa2.67□□□□□ -1.98
SAMMSON-213ENST00000641336 RPL37P61927 97 aaKnown RBP2.67□□□□□ -1.98
SAMMSON-213ENST00000641336 DEFB105AQ8NG35 78 aa2.67□□□□□ -1.98
SAMMSON-213ENST00000641336 DNAH10Q8IVF4 4471 aa2.66□□□□□ -1.98
SAMMSON-213ENST00000641336 IGKV2D-30A0A075B6S6 120 aa2.65□□□□□ -1.99
SAMMSON-213ENST00000641336 SPRR1AP35321 89 aa2.65□□□□□ -1.99
SAMMSON-213ENST00000641336 KRTAP7-1Q8IUC3 87 aa2.65□□□□□ -1.99
SAMMSON-213ENST00000641336 APLNQ9ULZ1 77 aa2.65□□□□□ -1.99
SAMMSON-213ENST00000641336 A0A096LNI7 61 aa2.64□□□□□ -1.99
SAMMSON-213ENST00000641336 PLECQ15149 4684 aaKnown RBP2.63□□□□□ -1.99
SAMMSON-213ENST00000641336 COL7A1Q02388 2944 aa2.62□□□□□ -1.99
SAMMSON-213ENST00000641336 VPS13DQ5THJ4 4388 aa2.62□□□□□ -1.99
SAMMSON-213ENST00000641336 PRLHP81277 87 aa2.61□□□□□ -1.99
SAMMSON-213ENST00000641336 KRTAP13-3Q3SY46 172 aa2.61□□□□□ -1.99
SAMMSON-213ENST00000641336 C10orf95Q9H7T3 257 aa2.61□□□□□ -1.99
SAMMSON-213ENST00000641336 LYSTQ99698 3801 aa2.61□□□□□ -1.99
SAMMSON-213ENST00000641336 DNAH17Q9UFH2 4485 aa2.6□□□□□ -1.99
SAMMSON-213ENST00000641336 DNAH7Q8WXX0 4024 aa2.6□□□□□ -1.99
SAMMSON-213ENST00000641336 EPPK1P58107 5090 aaKnown RBP2.59□□□□□ -2
SAMMSON-213ENST00000641336 CSMD3Q7Z407 3707 aa2.58□□□□□ -2
SAMMSON-213ENST00000641336 BIRC6Q9NR09 4857 aa2.58□□□□□ -2
SAMMSON-213ENST00000641336 STAB2Q8WWQ8 2551 aa2.58□□□□□ -2
SAMMSON-213ENST00000641336 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
SAMMSON-213ENST00000641336 FLG2Q5D862 2391 aaPredicted RBP2.58□□□□□ -2
SAMMSON-213ENST00000641336 MT3P25713 68 aa2.58□□□□□ -2
SAMMSON-213ENST00000641336 SPRR1BP22528 89 aa2.57□□□□□ -2
SAMMSON-213ENST00000641336 KRTAP13-2Q52LG2 175 aa2.57□□□□□ -2
SAMMSON-213ENST00000641336 DNAH6Q9C0G6 4158 aa2.56□□□□□ -2
SAMMSON-213ENST00000641336 DNAH2Q9P225 4427 aa2.56□□□□□ -2
SAMMSON-213ENST00000641336 HECTD4Q9Y4D8 3996 aa2.55□□□□□ -2
SAMMSON-213ENST00000641336 SACSQ9NZJ4 4579 aa2.55□□□□□ -2
SAMMSON-213ENST00000641336 DNAH8Q96JB1 4490 aa2.54□□□□□ -2
SAMMSON-213ENST00000641336 TENM2Q9NT68 2774 aa2.54□□□□□ -2
SAMMSON-213ENST00000641336 KRTAP13-1Q8IUC0 172 aa2.54□□□□□ -2
SAMMSON-213ENST00000641336 RYR2Q92736 4967 aa2.54□□□□□ -2
SAMMSON-213ENST00000641336 RYR1P21817 5038 aa2.51□□□□□ -2.01
SAMMSON-213ENST00000641336 DNAH11Q96DT5 4516 aa2.5□□□□□ -2.01
SAMMSON-213ENST00000641336 DNAH5Q8TE73 4624 aa2.5□□□□□ -2.01
SAMMSON-213ENST00000641336 SRRM2Q9UQ35 2752 aaKnown RBP2.5□□□□□ -2.01
SAMMSON-213ENST00000641336 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
SAMMSON-213ENST00000641336 FRAS1Q86XX4 4008 aa2.5□□□□□ -2.01
SAMMSON-213ENST00000641336 HYDINQ4G0P3 5121 aa2.5□□□□□ -2.01
SAMMSON-213ENST00000641336 PCLOQ9Y6V0 5065 aa2.48□□□□□ -2.01
SAMMSON-213ENST00000641336 SPRR5A0A1B0GTR4 108 aa2.47□□□□□ -2.01
SAMMSON-213ENST00000641336 PKD1P98161 4303 aa2.47□□□□□ -2.01
SAMMSON-213ENST00000641336 KMT2AQ03164 3969 aa2.47□□□□□ -2.01
SAMMSON-213ENST00000641336 HERC2O95714 4834 aa2.45□□□□□ -2.02
SAMMSON-213ENST00000641336 SPINK6Q6UWN8 80 aa2.44□□□□□ -2.02
SAMMSON-213ENST00000641336 FAT2Q9NYQ8 4349 aa2.44□□□□□ -2.02
SAMMSON-213ENST00000641336 KRTAP10-1P60331 282 aa2.43□□□□□ -2.02
SAMMSON-213ENST00000641336 S4R3F8 94 aa2.43□□□□□ -2.02
SAMMSON-213ENST00000641336 SPINK1P00995 79 aa2.42□□□□□ -2.02
SAMMSON-213ENST00000641336 A0A1B0GVY2 172 aa2.42□□□□□ -2.02
SAMMSON-213ENST00000641336 LRP1BQ9NZR2 4599 aa2.4□□□□□ -2.03
SAMMSON-213ENST00000641336 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
SAMMSON-213ENST00000641336 Q5VSD8 79 aa2.39□□□□□ -2.03
SAMMSON-213ENST00000641336 KRTAP1-4P0C5Y4 121 aa2.37□□□□□ -2.03
SAMMSON-213ENST00000641336 DYNC1H1Q14204 4646 aaKnown RBP2.37□□□□□ -2.03
SAMMSON-213ENST00000641336 KIAA1109Q2LD37 5005 aa2.37□□□□□ -2.03
SAMMSON-213ENST00000641336 ABCA13Q86UQ4 5058 aa2.37□□□□□ -2.03
SAMMSON-213ENST00000641336 PKHD1P08F94 4074 aa2.36□□□□□ -2.03
SAMMSON-213ENST00000641336 PKHD1L1Q86WI1 4243 aa2.36□□□□□ -2.03
SAMMSON-213ENST00000641336 APOBP04114 4563 aaKnown RBP2.36□□□□□ -2.03
SAMMSON-213ENST00000641336 HERC1Q15751 4861 aa2.35□□□□□ -2.03
SAMMSON-213ENST00000641336 VPS13BQ7Z7G8 4022 aa2.35□□□□□ -2.03
SAMMSON-213ENST00000641336 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
SAMMSON-213ENST00000641336 SMR3BP02814 79 aaPredicted RBP2.33□□□□□ -2.04
SAMMSON-213ENST00000641336 RPS29P62273 56 aaKnown RBP2.31□□□□□ -2.04
SAMMSON-213ENST00000641336 HSPG2P98160 4391 aa2.3□□□□□ -2.04
SAMMSON-213ENST00000641336 UBR4Q5T4S7 5183 aa2.3□□□□□ -2.04
SAMMSON-213ENST00000641336 A0A0D9SG42 100 aa2.3□□□□□ -2.04
SAMMSON-213ENST00000641336 KRTAP10-4P60372 401 aaPredicted RBP2.29□□□□□ -2.04
SAMMSON-213ENST00000641336 C9orf92A6NGG3 77 aa2.28□□□□□ -2.04
SAMMSON-213ENST00000641336 KRTAP12-1P59990 96 aa2.28□□□□□ -2.04
SAMMSON-213ENST00000641336 FAT1Q14517 4588 aa2.28□□□□□ -2.04
SAMMSON-213ENST00000641336 LCE1FQ5T754 118 aa2.27□□□□□ -2.05
SAMMSON-213ENST00000641336 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
SAMMSON-213ENST00000641336 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
SAMMSON-213ENST00000641336 FAT3Q8TDW7 4589 aa2.26□□□□□ -2.05
SAMMSON-213ENST00000641336 DMBT1Q9UGM3 2413 aaPredicted RBP2.26□□□□□ -2.05
SAMMSON-213ENST00000641336 TNXBP22105 4242 aa2.24□□□□□ -2.05
SAMMSON-213ENST00000641336 M0QZ58 72 aa2.23□□□□□ -2.05
SAMMSON-213ENST00000641336 MYCBP2O75592 4640 aa2.23□□□□□ -2.05
SAMMSON-213ENST00000641336 LCE3CQ5T5A8 94 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms