RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.96
SAMMSON-213ENST00000641336 CHIC1Q5VXU3 224 aa19.64■□□□□ 0.73
SAMMSON-213ENST00000641336 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
SAMMSON-213ENST00000641336 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
SAMMSON-213ENST00000641336 POTEDQ86YR6 584 aa17.49■□□□□ 0.39
SAMMSON-213ENST00000641336 FOXD1Q16676 465 aa17■□□□□ 0.31
SAMMSON-213ENST00000641336 MSH5O43196 834 aa16.25■□□□□ 0.19
SAMMSON-213ENST00000641336 PIAS4Q8N2W9 510 aaPredicted RBP15.62■□□□□ 0.09
SAMMSON-213ENST00000641336 PPP6R1Q9UPN7 881 aa15.18■□□□□ 0.02
SAMMSON-213ENST00000641336 ADRA2BP18089 450 aa15.05■□□□□ -0
SAMMSON-213ENST00000641336 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
SAMMSON-213ENST00000641336 CACNB1Q02641 598 aaPredicted RBP14.51□□□□□ -0.09
SAMMSON-213ENST00000641336 DMRT2Q9Y5R5 561 aa14.22□□□□□ -0.13
SAMMSON-213ENST00000641336 MAPK8IP2Q13387 824 aaPredicted RBP14.12□□□□□ -0.15
SAMMSON-213ENST00000641336 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
SAMMSON-213ENST00000641336 SCAF1Q9H7N4 1312 aaKnown RBP13.76□□□□□ -0.21
SAMMSON-213ENST00000641336 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
SAMMSON-213ENST00000641336 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
SAMMSON-213ENST00000641336 POTEHQ6S545 545 aa13.5□□□□□ -0.25
SAMMSON-213ENST00000641336 HOXD11P31277 338 aaPredicted RBP13.34□□□□□ -0.27
SAMMSON-213ENST00000641336 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
SAMMSON-213ENST00000641336 RNF216Q9NWF9 866 aaPredicted RBP12.97□□□□□ -0.33
SAMMSON-213ENST00000641336 PPP4R3CPQ6ZMV5 832 aa12.86□□□□□ -0.35
SAMMSON-213ENST00000641336 CNKSR2Q8WXI2 1034 aa12.83□□□□□ -0.35
SAMMSON-213ENST00000641336 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.65□□□□□ -0.38
SAMMSON-213ENST00000641336 DSG3P32926 999 aa12.6□□□□□ -0.39
SAMMSON-213ENST00000641336 SPINK5Q9NQ38 1064 aaPredicted RBP12.42□□□□□ -0.42
SAMMSON-213ENST00000641336 CAPN15O75808 1086 aa12.41□□□□□ -0.42
SAMMSON-213ENST00000641336 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
SAMMSON-213ENST00000641336 SP7Q8TDD2 431 aaPredicted RBP12.21□□□□□ -0.45
SAMMSON-213ENST00000641336 CHRDL2Q6WN34 429 aa12.14□□□□□ -0.47
SAMMSON-213ENST00000641336 NCBP3Q53F19 620 aaKnown RBP12.06□□□□□ -0.48
SAMMSON-213ENST00000641336 ABCB7O75027 752 aa12.05□□□□□ -0.48
SAMMSON-213ENST00000641336 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.48
SAMMSON-213ENST00000641336 TRHP20396 242 aaPredicted RBP11.98□□□□□ -0.49
SAMMSON-213ENST00000641336 ZNF219Q9P2Y4 722 aaPredicted RBP11.94□□□□□ -0.5
SAMMSON-213ENST00000641336 NPM3O75607 178 aaKnown RBP11.91□□□□□ -0.5
SAMMSON-213ENST00000641336 APLP2Q06481 763 aa11.84□□□□□ -0.51
SAMMSON-213ENST00000641336 HAX1O00165 279 aa11.68□□□□□ -0.54
SAMMSON-213ENST00000641336 PIP4P2Q8N4L2 257 aa11.66□□□□□ -0.54
SAMMSON-213ENST00000641336 SLC4A2P04920 1241 aa11.64□□□□□ -0.55
SAMMSON-213ENST00000641336 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
SAMMSON-213ENST00000641336 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
SAMMSON-213ENST00000641336 AKT1S1Q96B36 256 aa11.56□□□□□ -0.56
SAMMSON-213ENST00000641336 EVX2Q03828 476 aa11.51□□□□□ -0.57
SAMMSON-213ENST00000641336 SAMD1Q6SPF0 538 aaPredicted RBP11.5□□□□□ -0.57
SAMMSON-213ENST00000641336 PLSCR2Q9NRY7 297 aa11.48□□□□□ -0.57
SAMMSON-213ENST00000641336 POLA2Q14181 598 aa11.46□□□□□ -0.57
SAMMSON-213ENST00000641336 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.58
SAMMSON-213ENST00000641336 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
SAMMSON-213ENST00000641336 LHX8Q68G74 356 aa11.45□□□□□ -0.58
SAMMSON-213ENST00000641336 PITPNM1O00562 1244 aa11.35□□□□□ -0.59
SAMMSON-213ENST00000641336 GABBR2O75899 941 aa11.18□□□□□ -0.62
SAMMSON-213ENST00000641336 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
SAMMSON-213ENST00000641336 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
SAMMSON-213ENST00000641336 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
SAMMSON-213ENST00000641336 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
SAMMSON-213ENST00000641336 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
SAMMSON-213ENST00000641336 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
SAMMSON-213ENST00000641336 ATF5Q9Y2D1 282 aaPredicted RBP10.87□□□□□ -0.67
SAMMSON-213ENST00000641336 KCNA4P22459 653 aa10.83□□□□□ -0.68
SAMMSON-213ENST00000641336 POTEMA6NI47 508 aa10.82□□□□□ -0.68
SAMMSON-213ENST00000641336 CLEC11AQ9Y240 323 aa10.79□□□□□ -0.68
SAMMSON-213ENST00000641336 SPDYE1Q8NFV5 336 aaPredicted RBP10.78□□□□□ -0.68
SAMMSON-213ENST00000641336 POTEGQ6S5H5 508 aa10.75□□□□□ -0.69
SAMMSON-213ENST00000641336 SPDYE2BA6NHP3 402 aa10.74□□□□□ -0.69
SAMMSON-213ENST00000641336 SPDYE6P0CI01 402 aa10.74□□□□□ -0.69
SAMMSON-213ENST00000641336 SPDYE2Q495Y8 402 aa10.74□□□□□ -0.69
SAMMSON-213ENST00000641336 OTUD5Q96G74 571 aa10.72□□□□□ -0.69
SAMMSON-213ENST00000641336 PCDH10Q9P2E7 1040 aa10.71□□□□□ -0.69
SAMMSON-213ENST00000641336 CHADLQ6NUI6 762 aa10.7□□□□□ -0.7
SAMMSON-213ENST00000641336 CLCN6P51797 869 aa10.68□□□□□ -0.7
SAMMSON-213ENST00000641336 DCBLD2Q96PD2 775 aa10.64□□□□□ -0.71
SAMMSON-213ENST00000641336 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
SAMMSON-213ENST00000641336 POTEB2H3BUK9 544 aa10.58□□□□□ -0.72
SAMMSON-213ENST00000641336 SSUH2Q9Y2M2 353 aa10.51□□□□□ -0.73
SAMMSON-213ENST00000641336 PRR29P0C7W0 189 aa10.48□□□□□ -0.73
SAMMSON-213ENST00000641336 FBLN2P98095 1184 aa10.47□□□□□ -0.73
SAMMSON-213ENST00000641336 FARP1Q9Y4F1 1045 aaPredicted RBP10.45□□□□□ -0.74
SAMMSON-213ENST00000641336 ZNF692Q9BU19 519 aaPredicted RBP10.44□□□□□ -0.74
SAMMSON-213ENST00000641336 ZNF579Q8NAF0 562 aaKnown RBP10.43□□□□□ -0.74
SAMMSON-213ENST00000641336 LCE2DQ5TA82 110 aaPredicted RBP10.4□□□□□ -0.74
SAMMSON-213ENST00000641336 FOXD4L1Q9NU39 408 aa10.39□□□□□ -0.75
SAMMSON-213ENST00000641336 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
SAMMSON-213ENST00000641336 MKRN4PQ13434 485 aaPredicted RBP10.32□□□□□ -0.76
SAMMSON-213ENST00000641336 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
SAMMSON-213ENST00000641336 SLC24A1O60721 1099 aa10.28□□□□□ -0.76
SAMMSON-213ENST00000641336 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
SAMMSON-213ENST00000641336 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
SAMMSON-213ENST00000641336 PABPN1Q86U42 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
SAMMSON-213ENST00000641336 PELP1Q8IZL8 1130 aaKnown RBP10.27□□□□□ -0.77
SAMMSON-213ENST00000641336 MAMSTRQ6ZN01 415 aa10.22□□□□□ -0.77
SAMMSON-213ENST00000641336 ATXN8OSP0DMR3 200 aa10.18□□□□□ -0.78
SAMMSON-213ENST00000641336 METRNQ9UJH8 293 aa10.17□□□□□ -0.78
SAMMSON-213ENST00000641336 CDAN1Q8IWY9 1227 aa10.17□□□□□ -0.78
SAMMSON-213ENST00000641336 C7P10643 843 aa10.12□□□□□ -0.79
SAMMSON-213ENST00000641336 SLC39A7Q92504 469 aa10.11□□□□□ -0.79
SAMMSON-213ENST00000641336 PHF12Q96QT6 1004 aa10.11□□□□□ -0.79
SAMMSON-213ENST00000641336 ASTLQ6HA08 431 aaPredicted RBP10.1□□□□□ -0.79
SAMMSON-213ENST00000641336 SCUBE2Q9NQ36 999 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms