RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
HNRNPU-217ENST00000638952 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
HNRNPU-217ENST00000638952 COL7A1Q02388 2944 aa7.41□□□□□ -1.22
HNRNPU-217ENST00000638952 CSMD3Q7Z407 3707 aa7.36□□□□□ -1.23
HNRNPU-217ENST00000638952 DNAH9Q9NYC9 4486 aa7.36□□□□□ -1.23
HNRNPU-217ENST00000638952 KRTAP10-5P60370 271 aa7.33□□□□□ -1.24
HNRNPU-217ENST00000638952 DNAH1Q9P2D7 4330 aa7.29□□□□□ -1.24
HNRNPU-217ENST00000638952 ZNF469Q96JG9 3925 aaPredicted RBP7.21□□□□□ -1.26
HNRNPU-217ENST00000638952 DNAH5Q8TE73 4624 aa7.19□□□□□ -1.26
HNRNPU-217ENST00000638952 PLECQ15149 4684 aaKnown RBP7.16□□□□□ -1.26
HNRNPU-217ENST00000638952 DNAH10Q8IVF4 4471 aa7.14□□□□□ -1.27
HNRNPU-217ENST00000638952 DNAH17Q9UFH2 4485 aa7.09□□□□□ -1.27
HNRNPU-217ENST00000638952 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
HNRNPU-217ENST00000638952 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
HNRNPU-217ENST00000638952 VPS13DQ5THJ4 4388 aa7.02□□□□□ -1.29
HNRNPU-217ENST00000638952 DNAH3Q8TD57 4116 aa7.02□□□□□ -1.29
HNRNPU-217ENST00000638952 KRTAP4-1Q9BYQ7 146 aa7□□□□□ -1.29
HNRNPU-217ENST00000638952 DNAH8Q96JB1 4490 aa6.88□□□□□ -1.31
HNRNPU-217ENST00000638952 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
HNRNPU-217ENST00000638952 STARD9Q9P2P6 4700 aa6.83□□□□□ -1.32
HNRNPU-217ENST00000638952 SACSQ9NZJ4 4579 aa6.83□□□□□ -1.32
HNRNPU-217ENST00000638952 LRP1BQ9NZR2 4599 aa6.81□□□□□ -1.32
HNRNPU-217ENST00000638952 DYNC1H1Q14204 4646 aaKnown RBP6.81□□□□□ -1.32
HNRNPU-217ENST00000638952 MT1HP80294 61 aa6.8□□□□□ -1.32
HNRNPU-217ENST00000638952 ANK2Q01484 3957 aa6.8□□□□□ -1.32
HNRNPU-217ENST00000638952 DYNC2H1Q8NCM8 4307 aaKnown RBP6.78□□□□□ -1.32
HNRNPU-217ENST00000638952 FAT2Q9NYQ8 4349 aa6.76□□□□□ -1.33
HNRNPU-217ENST00000638952 MT2AP02795 61 aa6.72□□□□□ -1.33
HNRNPU-217ENST00000638952 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
HNRNPU-217ENST00000638952 FAT1Q14517 4588 aa6.68□□□□□ -1.34
HNRNPU-217ENST00000638952 KMT2AQ03164 3969 aa6.61□□□□□ -1.35
HNRNPU-217ENST00000638952 MT1FP04733 61 aa6.61□□□□□ -1.35
HNRNPU-217ENST00000638952 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
HNRNPU-217ENST00000638952 VPS13BQ7Z7G8 4022 aa6.59□□□□□ -1.35
HNRNPU-217ENST00000638952 DNHD1Q96M86 4753 aa6.57□□□□□ -1.36
HNRNPU-217ENST00000638952 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
HNRNPU-217ENST00000638952 APOBP04114 4563 aaKnown RBP6.56□□□□□ -1.36
HNRNPU-217ENST00000638952 PRKDCP78527 4128 aaKnown RBP6.55□□□□□ -1.36
HNRNPU-217ENST00000638952 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.37
HNRNPU-217ENST00000638952 CMYA5Q8N3K9 4069 aa6.51□□□□□ -1.37
HNRNPU-217ENST00000638952 DNAH7Q8WXX0 4024 aa6.49□□□□□ -1.37
HNRNPU-217ENST00000638952 DNAH6Q9C0G6 4158 aa6.48□□□□□ -1.37
HNRNPU-217ENST00000638952 RYR1P21817 5038 aa6.47□□□□□ -1.37
HNRNPU-217ENST00000638952 KRTAP10-7P60409 375 aaPredicted RBP6.43□□□□□ -1.38
HNRNPU-217ENST00000638952 HECTD4Q9Y4D8 3996 aa6.37□□□□□ -1.39
HNRNPU-217ENST00000638952 LYSTQ99698 3801 aa6.34□□□□□ -1.39
HNRNPU-217ENST00000638952 KRTAP17-1Q9BYP8 105 aa6.31□□□□□ -1.4
HNRNPU-217ENST00000638952 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
HNRNPU-217ENST00000638952 FAT3Q8TDW7 4589 aa6.28□□□□□ -1.4
HNRNPU-217ENST00000638952 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
HNRNPU-217ENST00000638952 RYR3Q15413 4870 aa6.25□□□□□ -1.41
HNRNPU-217ENST00000638952 KRTAP12-4P60329 112 aa6.21□□□□□ -1.42
HNRNPU-217ENST00000638952 MYCBP2O75592 4640 aa6.2□□□□□ -1.42
HNRNPU-217ENST00000638952 KRTAP19-8Q3LI54 63 aa6.2□□□□□ -1.42
HNRNPU-217ENST00000638952 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
HNRNPU-217ENST00000638952 LCE3BQ5TA77 95 aa6.17□□□□□ -1.42
HNRNPU-217ENST00000638952 MT1XP80297 61 aa6.15□□□□□ -1.42
HNRNPU-217ENST00000638952 LRP1Q07954 4544 aaKnown RBP6.12□□□□□ -1.43
HNRNPU-217ENST00000638952 RYR2Q92736 4967 aa6.05□□□□□ -1.44
HNRNPU-217ENST00000638952 MT1BP07438 61 aa6.05□□□□□ -1.44
HNRNPU-217ENST00000638952 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
HNRNPU-217ENST00000638952 KRTAP9-8Q9BYQ0 159 aa5.98□□□□□ -1.45
HNRNPU-217ENST00000638952 MT1GP13640 62 aa5.95□□□□□ -1.46
HNRNPU-217ENST00000638952 HYDINQ4G0P3 5121 aa5.94□□□□□ -1.46
HNRNPU-217ENST00000638952 HSPG2P98160 4391 aa5.94□□□□□ -1.46
HNRNPU-217ENST00000638952 KIAA1109Q2LD37 5005 aa5.92□□□□□ -1.46
HNRNPU-217ENST00000638952 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
HNRNPU-217ENST00000638952 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
HNRNPU-217ENST00000638952 HERC1Q15751 4861 aa5.91□□□□□ -1.46
HNRNPU-217ENST00000638952 LCE3DQ9BYE3 92 aa5.88□□□□□ -1.47
HNRNPU-217ENST00000638952 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
HNRNPU-217ENST00000638952 SPRR2EP22531 72 aa5.86□□□□□ -1.47
HNRNPU-217ENST00000638952 SPRR2BP35325 72 aa5.86□□□□□ -1.47
HNRNPU-217ENST00000638952 SPRR2AP35326 72 aa5.86□□□□□ -1.47
HNRNPU-217ENST00000638952 LPAP08519 4548 aa5.85□□□□□ -1.47
HNRNPU-217ENST00000638952 PKD1P98161 4303 aa5.84□□□□□ -1.48
HNRNPU-217ENST00000638952 PKHD1L1Q86WI1 4243 aa5.83□□□□□ -1.48
HNRNPU-217ENST00000638952 KRTAP9-3Q9BYQ3 159 aa5.83□□□□□ -1.48
HNRNPU-217ENST00000638952 LCE3EQ5T5B0 92 aa5.81□□□□□ -1.48
HNRNPU-217ENST00000638952 LRP2P98164 4655 aa5.78□□□□□ -1.48
HNRNPU-217ENST00000638952 TNXBP22105 4242 aa5.78□□□□□ -1.48
HNRNPU-217ENST00000638952 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
HNRNPU-217ENST00000638952 KRTAP4-7Q9BYR0 210 aa5.67□□□□□ -1.5
HNRNPU-217ENST00000638952 SPRR2DP22532 72 aa5.65□□□□□ -1.5
HNRNPU-217ENST00000638952 LCE2BO14633 110 aa5.64□□□□□ -1.51
HNRNPU-217ENST00000638952 HERC2O95714 4834 aa5.63□□□□□ -1.51
HNRNPU-217ENST00000638952 KRTAP19-2Q3LHN2 52 aa5.62□□□□□ -1.51
HNRNPU-217ENST00000638952 KMT2CQ8NEZ4 4911 aaKnown RBP5.6□□□□□ -1.51
HNRNPU-217ENST00000638952 MT1LQ93083 61 aa5.57□□□□□ -1.52
HNRNPU-217ENST00000638952 PRM1P04553 51 aa5.52□□□□□ -1.53
HNRNPU-217ENST00000638952 KRTAP19-3Q7Z4W3 81 aa5.52□□□□□ -1.53
HNRNPU-217ENST00000638952 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
HNRNPU-217ENST00000638952 BIRC6Q9NR09 4857 aa5.52□□□□□ -1.53
HNRNPU-217ENST00000638952 MT1EP04732 61 aa5.5□□□□□ -1.53
HNRNPU-217ENST00000638952 FLGP20930 4061 aaPredicted RBP5.49□□□□□ -1.53
HNRNPU-217ENST00000638952 PCLOQ9Y6V0 5065 aa5.46□□□□□ -1.54
HNRNPU-217ENST00000638952 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
HNRNPU-217ENST00000638952 MT1MQ8N339 61 aa5.32□□□□□ -1.56
HNRNPU-217ENST00000638952 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
HNRNPU-217ENST00000638952 MT3P25713 68 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms