RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 TRIOO75962 3097 aa0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 LRBAP50851 2863 aa0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 KRTAP21-1Q3LI58 79 aa0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 KRTAP6-2Q3LI66 62 aa0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 KRTAP19-5Q3LI72 72 aa0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 DNAH6Q9C0G6 4158 aa0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 BOD1L1Q8NFC6 3051 aa0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 LAMA5O15230 3695 aa0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 SZT2Q5T011 3432 aa0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 SETXQ7Z333 2677 aaKnown RBP0.82□□□□□ -2.28
AC004943.3-201ENST00000624116 PTPN13Q12923 2485 aa0.81□□□□□ -2.28
AC004943.3-201ENST00000624116 RIF1Q5UIP0 2472 aaKnown RBP0.81□□□□□ -2.28
AC004943.3-201ENST00000624116 CSMD1Q96PZ7 3565 aa0.81□□□□□ -2.28
AC004943.3-201ENST00000624116 HUWE1Q7Z6Z7 4374 aaKnown RBP0.81□□□□□ -2.28
AC004943.3-201ENST00000624116 SPRR2DP22532 72 aa0.81□□□□□ -2.28
AC004943.3-201ENST00000624116 DEFB133Q30KQ1 61 aa0.81□□□□□ -2.28
AC004943.3-201ENST00000624116 APOBP04114 4563 aaKnown RBP0.81□□□□□ -2.28
AC004943.3-201ENST00000624116 NBEAQ8NFP9 2946 aa0.81□□□□□ -2.28
AC004943.3-201ENST00000624116 ANKRD11Q6UB99 2663 aaPredicted RBP0.8□□□□□ -2.28
AC004943.3-201ENST00000624116 NSD1Q96L73 2696 aaPredicted RBP0.8□□□□□ -2.28
AC004943.3-201ENST00000624116 MTORP42345 2549 aa0.79□□□□□ -2.28
AC004943.3-201ENST00000624116 LINC01556Q5JQF7 62 aa0.79□□□□□ -2.28
AC004943.3-201ENST00000624116 SONP18583 2426 aaKnown RBP0.79□□□□□ -2.28
AC004943.3-201ENST00000624116 ACACBO00763 2458 aa0.79□□□□□ -2.28
AC004943.3-201ENST00000624116 CACNA1AO00555 2505 aa0.79□□□□□ -2.28
AC004943.3-201ENST00000624116 HIVEP1P15822 2718 aa0.79□□□□□ -2.28
AC004943.3-201ENST00000624116 DNAH1Q9P2D7 4330 aa0.78□□□□□ -2.28
AC004943.3-201ENST00000624116 SMG1Q96Q15 3661 aaKnown RBP0.78□□□□□ -2.28
AC004943.3-201ENST00000624116 CEP350Q5VT06 3117 aa0.78□□□□□ -2.28
AC004943.3-201ENST00000624116 MT1AP04731 61 aa0.78□□□□□ -2.28
AC004943.3-201ENST00000624116 FAT1Q14517 4588 aa0.78□□□□□ -2.28
AC004943.3-201ENST00000624116 SVEP1Q4LDE5 3571 aa0.78□□□□□ -2.28
AC004943.3-201ENST00000624116 FAM186AA6NE01 2351 aa0.77□□□□□ -2.29
AC004943.3-201ENST00000624116 EPG5Q9HCE0 2579 aa0.77□□□□□ -2.29
AC004943.3-201ENST00000624116 HRNRQ86YZ3 2850 aaPredicted RBP0.77□□□□□ -2.29
AC004943.3-201ENST00000624116 PLECQ15149 4684 aaKnown RBP0.77□□□□□ -2.29
AC004943.3-201ENST00000624116 CEP250Q9BV73 2442 aa0.77□□□□□ -2.29
AC004943.3-201ENST00000624116 SYNE1Q8NF91 8797 aaKnown RBP0.76□□□□□ -2.29
AC004943.3-201ENST00000624116 HTTP42858 3142 aa0.75□□□□□ -2.29
AC004943.3-201ENST00000624116 LRRK2Q5S007 2527 aa0.75□□□□□ -2.29
AC004943.3-201ENST00000624116 SPG11Q96JI7 2443 aa0.75□□□□□ -2.29
AC004943.3-201ENST00000624116 DCHS1Q96JQ0 3298 aa0.75□□□□□ -2.29
AC004943.3-201ENST00000624116 SPRR2BP35325 72 aa0.75□□□□□ -2.29
AC004943.3-201ENST00000624116 UNC79Q9P2D8 2635 aa0.75□□□□□ -2.29
AC004943.3-201ENST00000624116 ANKHD1Q8IWZ3 2542 aaKnown RBP0.75□□□□□ -2.29
AC004943.3-201ENST00000624116 MXRA5Q9NR99 2828 aa0.74□□□□□ -2.29
AC004943.3-201ENST00000624116 ITPR1Q14643 2758 aa0.74□□□□□ -2.29
AC004943.3-201ENST00000624116 ADGRG4Q8IZF6 3080 aa0.74□□□□□ -2.29
AC004943.3-201ENST00000624116 DNAH9Q9NYC9 4486 aa0.74□□□□□ -2.29
AC004943.3-201ENST00000624116 DMDP11532 3685 aa0.73□□□□□ -2.29
AC004943.3-201ENST00000624116 LAMA3Q16787 3333 aa0.73□□□□□ -2.29
AC004943.3-201ENST00000624116 CSMD2Q7Z408 3487 aa0.73□□□□□ -2.29
AC004943.3-201ENST00000624116 UTP20O75691 2785 aaKnown RBP0.73□□□□□ -2.29
AC004943.3-201ENST00000624116 PKHD1P08F94 4074 aa0.72□□□□□ -2.29
AC004943.3-201ENST00000624116 CFAP47Q6ZTR5 3102 aa0.72□□□□□ -2.29
AC004943.3-201ENST00000624116 NCOR2Q9Y618 2525 aa0.72□□□□□ -2.29
AC004943.3-201ENST00000624116 NIPBLQ6KC79 2804 aaeCLIP0.71□□□□□ -2.3
AC004943.3-201ENST00000624116 FLNBO75369 2602 aaKnown RBP0.71□□□□□ -2.3
AC004943.3-201ENST00000624116 LAMA1P25391 3075 aa0.7□□□□□ -2.3
AC004943.3-201ENST00000624116 LPAP08519 4548 aa0.7□□□□□ -2.3
AC004943.3-201ENST00000624116 RPS29P62273 56 aaKnown RBP0.7□□□□□ -2.3
AC004943.3-201ENST00000624116 TEP1Q99973 2627 aaKnown RBP0.7□□□□□ -2.3
AC004943.3-201ENST00000624116 DNAH5Q8TE73 4624 aa0.69□□□□□ -2.3
AC004943.3-201ENST00000624116 CMYA5Q8N3K9 4069 aa0.69□□□□□ -2.3
AC004943.3-201ENST00000624116 HTN3P15516 51 aa0.69□□□□□ -2.3
AC004943.3-201ENST00000624116 SPRR2AP35326 72 aa0.69□□□□□ -2.3
AC004943.3-201ENST00000624116 FREM2Q5SZK8 3169 aa0.69□□□□□ -2.3
AC004943.3-201ENST00000624116 SPRR2FQ96RM1 72 aa0.68□□□□□ -2.3
AC004943.3-201ENST00000624116 Q9Y3F1 56 aa0.68□□□□□ -2.3
AC004943.3-201ENST00000624116 MYO18BQ8IUG5 2567 aa0.68□□□□□ -2.3
AC004943.3-201ENST00000624116 USP9XQ93008 2570 aaPredicted RBP0.67□□□□□ -2.3
AC004943.3-201ENST00000624116 LRP1BQ9NZR2 4599 aa0.67□□□□□ -2.3
AC004943.3-201ENST00000624116 ZFYVE26Q68DK2 2539 aa0.67□□□□□ -2.3
AC004943.3-201ENST00000624116 FLNAP21333 2647 aaKnown RBP0.67□□□□□ -2.3
AC004943.3-201ENST00000624116 MAP1AP78559 2803 aaPredicted RBP0.67□□□□□ -2.3
AC004943.3-201ENST00000624116 MUC3AQ02505 3323 aa0.66□□□□□ -2.3
AC004943.3-201ENST00000624116 TLN2Q9Y4G6 2542 aa0.66□□□□□ -2.3
AC004943.3-201ENST00000624116 TRRAPQ9Y4A5 3859 aa0.66□□□□□ -2.3
AC004943.3-201ENST00000624116 TGP01266 2768 aa0.65□□□□□ -2.3
AC004943.3-201ENST00000624116 FASNP49327 2511 aaKnown RBP0.65□□□□□ -2.31
AC004943.3-201ENST00000624116 WDFY4Q6ZS81 3184 aa0.65□□□□□ -2.31
AC004943.3-201ENST00000624116 SPRR2EP22531 72 aa0.65□□□□□ -2.31
AC004943.3-201ENST00000624116 XIRP2A4UGR9 3374 aa0.64□□□□□ -2.31
AC004943.3-201ENST00000624116 DEFB4AO15263 64 aa0.63□□□□□ -2.31
AC004943.3-201ENST00000624116 DYNC1H1Q14204 4646 aaKnown RBP0.63□□□□□ -2.31
AC004943.3-201ENST00000624116 ITPR2Q14571 2701 aa0.63□□□□□ -2.31
AC004943.3-201ENST00000624116 DNAH17Q9UFH2 4485 aa0.63□□□□□ -2.31
AC004943.3-201ENST00000624116 TEX15Q9BXT5 2789 aa0.62□□□□□ -2.31
AC004943.3-201ENST00000624116 SRCAPQ6ZRS2 3230 aa0.62□□□□□ -2.31
AC004943.3-201ENST00000624116 CFAP46Q8IYW2 2715 aa0.61□□□□□ -2.31
AC004943.3-201ENST00000624116 VPS13CQ709C8 3753 aa0.61□□□□□ -2.31
AC004943.3-201ENST00000624116 SPEGQ15772 3267 aa0.6□□□□□ -2.31
AC004943.3-201ENST00000624116 HMCN2Q8NDA2 5059 aa0.6□□□□□ -2.31
AC004943.3-201ENST00000624116 CD52P31358 61 aa0.6□□□□□ -2.31
AC004943.3-201ENST00000624116 MUC17Q685J3 4493 aa0.59□□□□□ -2.31
AC004943.3-201ENST00000624116 HERC1Q15751 4861 aa0.59□□□□□ -2.31
AC004943.3-201ENST00000624116 LOC400499M0QZD8 3231 aa0.57□□□□□ -2.32
AC004943.3-201ENST00000624116 VPS13AQ96RL7 3174 aa0.55□□□□□ -2.32
AC004943.3-201ENST00000624116 DOPEY1Q5JWR5 2465 aa0.55□□□□□ -2.32
AC004943.3-201ENST00000624116 MT1EP04732 61 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms