RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 AEBP2Q6ZN18 517 aaPredicted RBP30.72■■■□□ 2.51
AC004943.3-201ENST00000624116 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
AC004943.3-201ENST00000624116 SENP3Q9H4L4 574 aaPredicted RBP26.36■■□□□ 1.81
AC004943.3-201ENST00000624116 PHF23Q9BUL5 403 aaPredicted RBP25.95■■□□□ 1.74
AC004943.3-201ENST00000624116 FOXD1Q16676 465 aa24.41■■□□□ 1.5
AC004943.3-201ENST00000624116 PLPPR3Q6T4P5 718 aa23.71■■□□□ 1.39
AC004943.3-201ENST00000624116 MSH5O43196 834 aa22.94■■□□□ 1.26
AC004943.3-201ENST00000624116 PIAS4Q8N2W9 510 aaPredicted RBP22.94■■□□□ 1.26
AC004943.3-201ENST00000624116 PPP6R1Q9UPN7 881 aa22.9■■□□□ 1.26
AC004943.3-201ENST00000624116 ADRA2BP18089 450 aa22.87■■□□□ 1.25
AC004943.3-201ENST00000624116 POTEDQ86YR6 584 aa21.92■■□□□ 1.1
AC004943.3-201ENST00000624116 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
AC004943.3-201ENST00000624116 MAPK8IP2Q13387 824 aaPredicted RBP20.91■□□□□ 0.94
AC004943.3-201ENST00000624116 DMRT2Q9Y5R5 561 aa20.88■□□□□ 0.93
AC004943.3-201ENST00000624116 PPP4R3CPQ6ZMV5 832 aa20.73■□□□□ 0.91
AC004943.3-201ENST00000624116 CNKSR2Q8WXI2 1034 aa20.36■□□□□ 0.85
AC004943.3-201ENST00000624116 HOXD11P31277 338 aaPredicted RBP20.19■□□□□ 0.82
AC004943.3-201ENST00000624116 RNF216Q9NWF9 866 aaPredicted RBP20.13■□□□□ 0.81
AC004943.3-201ENST00000624116 NCBP3Q53F19 620 aaKnown RBP20.12■□□□□ 0.81
AC004943.3-201ENST00000624116 DCAF8L1A6NGE4 600 aa20.02■□□□□ 0.8
AC004943.3-201ENST00000624116 NPM3O75607 178 aaKnown RBP19.68■□□□□ 0.74
AC004943.3-201ENST00000624116 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
AC004943.3-201ENST00000624116 CACNB1Q02641 598 aaPredicted RBP19.51■□□□□ 0.71
AC004943.3-201ENST00000624116 RNF39Q9H2S5 420 aa19.51■□□□□ 0.71
AC004943.3-201ENST00000624116 KCNA4P22459 653 aa19.44■□□□□ 0.7
AC004943.3-201ENST00000624116 C1QBPQ07021 282 aaKnown RBP19.3■□□□□ 0.68
AC004943.3-201ENST00000624116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.68
AC004943.3-201ENST00000624116 U3KPZ7 1027 aaPredicted RBP18.81■□□□□ 0.6
AC004943.3-201ENST00000624116 SLC4A2P04920 1241 aa18.7■□□□□ 0.58
AC004943.3-201ENST00000624116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
AC004943.3-201ENST00000624116 APLP2Q06481 763 aa18.54■□□□□ 0.56
AC004943.3-201ENST00000624116 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
AC004943.3-201ENST00000624116 CAPN15O75808 1086 aa18.5■□□□□ 0.55
AC004943.3-201ENST00000624116 SLC4A1APQ9BWU0 796 aaKnown RBP18.47■□□□□ 0.55
AC004943.3-201ENST00000624116 SPINK5Q9NQ38 1064 aaPredicted RBP18.45■□□□□ 0.54
AC004943.3-201ENST00000624116 SAMD1Q6SPF0 538 aaPredicted RBP18.39■□□□□ 0.53
AC004943.3-201ENST00000624116 DSG3P32926 999 aa18.31■□□□□ 0.52
AC004943.3-201ENST00000624116 ZNF219Q9P2Y4 722 aaPredicted RBP18.31■□□□□ 0.52
AC004943.3-201ENST00000624116 MYCNP04198 464 aaPredicted RBP18.3■□□□□ 0.52
AC004943.3-201ENST00000624116 TRHP20396 242 aaPredicted RBP18.23■□□□□ 0.51
AC004943.3-201ENST00000624116 FOXD4L1Q9NU39 408 aa18.18■□□□□ 0.5
AC004943.3-201ENST00000624116 ABCB7O75027 752 aa18.01■□□□□ 0.47
AC004943.3-201ENST00000624116 ZBTB22O15209 634 aa17.81■□□□□ 0.44
AC004943.3-201ENST00000624116 POLA2Q14181 598 aa17.78■□□□□ 0.44
AC004943.3-201ENST00000624116 ATF5Q9Y2D1 282 aaPredicted RBP17.68■□□□□ 0.42
AC004943.3-201ENST00000624116 ATXN8OSP0DMR3 200 aa17.67■□□□□ 0.42
AC004943.3-201ENST00000624116 RBM42Q9BTD8 480 aaKnown RBP17.62■□□□□ 0.41
AC004943.3-201ENST00000624116 ZBTB12Q9Y330 459 aaPredicted RBP17.59■□□□□ 0.41
AC004943.3-201ENST00000624116 POTEHQ6S545 545 aa17.26■□□□□ 0.35
AC004943.3-201ENST00000624116 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
AC004943.3-201ENST00000624116 FBLN2P98095 1184 aa17.19■□□□□ 0.34
AC004943.3-201ENST00000624116 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
AC004943.3-201ENST00000624116 AKT1S1Q96B36 256 aa17.18■□□□□ 0.34
AC004943.3-201ENST00000624116 EHMT2Q96KQ7 1210 aa17.11■□□□□ 0.33
AC004943.3-201ENST00000624116 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
AC004943.3-201ENST00000624116 SPDYE2BA6NHP3 402 aa16.98■□□□□ 0.31
AC004943.3-201ENST00000624116 SPDYE6P0CI01 402 aa16.98■□□□□ 0.31
AC004943.3-201ENST00000624116 SPDYE2Q495Y8 402 aa16.98■□□□□ 0.31
AC004943.3-201ENST00000624116 REM2Q8IYK8 340 aaPredicted RBP16.96■□□□□ 0.31
AC004943.3-201ENST00000624116 MKRN4PQ13434 485 aaPredicted RBP16.9■□□□□ 0.3
AC004943.3-201ENST00000624116 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
AC004943.3-201ENST00000624116 PITPNM1O00562 1244 aa16.76■□□□□ 0.27
AC004943.3-201ENST00000624116 SSUH2Q9Y2M2 353 aa16.72■□□□□ 0.27
AC004943.3-201ENST00000624116 SPDYE1Q8NFV5 336 aaPredicted RBP16.65■□□□□ 0.26
AC004943.3-201ENST00000624116 PIP4P2Q8N4L2 257 aa16.63■□□□□ 0.25
AC004943.3-201ENST00000624116 FXR2P51116 673 aaKnown RBP eCLIP16.59■□□□□ 0.25
AC004943.3-201ENST00000624116 CLEC11AQ9Y240 323 aa16.55■□□□□ 0.24
AC004943.3-201ENST00000624116 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
AC004943.3-201ENST00000624116 PRKAR2AP13861 404 aaKnown RBP16.36■□□□□ 0.21
AC004943.3-201ENST00000624116 PRR29P0C7W0 189 aa16.34■□□□□ 0.21
AC004943.3-201ENST00000624116 HAX1O00165 279 aa16.33■□□□□ 0.2
AC004943.3-201ENST00000624116 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
AC004943.3-201ENST00000624116 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
AC004943.3-201ENST00000624116 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.19
AC004943.3-201ENST00000624116 CHADLQ6NUI6 762 aa16.14■□□□□ 0.17
AC004943.3-201ENST00000624116 C19orf67A6NJJ6 358 aa16.06■□□□□ 0.16
AC004943.3-201ENST00000624116 FARP1Q9Y4F1 1045 aaPredicted RBP16■□□□□ 0.15
AC004943.3-201ENST00000624116 EVX2Q03828 476 aa15.99■□□□□ 0.15
AC004943.3-201ENST00000624116 PROM2Q8N271 834 aa15.91■□□□□ 0.14
AC004943.3-201ENST00000624116 CREBZFQ9NS37 354 aa15.9■□□□□ 0.14
AC004943.3-201ENST00000624116 CD44P16070 742 aaKnown RBP15.87■□□□□ 0.13
AC004943.3-201ENST00000624116 CLCN6P51797 869 aa15.78■□□□□ 0.12
AC004943.3-201ENST00000624116 NPM1P06748 294 aaKnown RBP eCLIP15.76■□□□□ 0.11
AC004943.3-201ENST00000624116 GABBR2O75899 941 aa15.75■□□□□ 0.11
AC004943.3-201ENST00000624116 PAK3O75914 559 aaPredicted RBP15.7■□□□□ 0.1
AC004943.3-201ENST00000624116 PLEKHG5O94827 1062 aa15.67■□□□□ 0.1
AC004943.3-201ENST00000624116 FKBP8Q14318 412 aa15.66■□□□□ 0.1
AC004943.3-201ENST00000624116 ZRANB1Q9UGI0 708 aa15.65■□□□□ 0.1
AC004943.3-201ENST00000624116 ZNF579Q8NAF0 562 aaKnown RBP15.64■□□□□ 0.09
AC004943.3-201ENST00000624116 MNX1P50219 401 aaPredicted RBP15.63■□□□□ 0.09
AC004943.3-201ENST00000624116 MIER1Q8N108 512 aa15.55■□□□□ 0.08
AC004943.3-201ENST00000624116 PLCD3Q8N3E9 789 aa15.47■□□□□ 0.07
AC004943.3-201ENST00000624116 DCBLD2Q96PD2 775 aa15.46■□□□□ 0.07
AC004943.3-201ENST00000624116 ZBTB47Q9UFB7 747 aaPredicted RBP15.46■□□□□ 0.07
AC004943.3-201ENST00000624116 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
AC004943.3-201ENST00000624116 PHF12Q96QT6 1004 aa15.4■□□□□ 0.06
AC004943.3-201ENST00000624116 GALR2O43603 387 aaPredicted RBP15.36■□□□□ 0.05
AC004943.3-201ENST00000624116 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
AC004943.3-201ENST00000624116 POTEIP0CG38 1075 aa15.34■□□□□ 0.05
AC004943.3-201ENST00000624116 CCDC61Q9Y6R9 512 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms