RNA–Protein interactions for RNA: ENST00000620443.1

GRIA3-207, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GRIA3, Length 4,943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-207ENST00000620443 PRKDCP78527 4128 aaKnown RBP2.84□□□□□ -1.95
GRIA3-207ENST00000620443 COL7A1Q02388 2944 aa2.83□□□□□ -1.96
GRIA3-207ENST00000620443 FBN3Q75N90 2809 aa2.83□□□□□ -1.96
GRIA3-207ENST00000620443 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
GRIA3-207ENST00000620443 FRAS1Q86XX4 4008 aa2.82□□□□□ -1.96
GRIA3-207ENST00000620443 KRTAP10-12P60413 245 aa2.81□□□□□ -1.96
GRIA3-207ENST00000620443 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
GRIA3-207ENST00000620443 DNHD1Q96M86 4753 aa2.79□□□□□ -1.96
GRIA3-207ENST00000620443 DYNC2H1Q8NCM8 4307 aaKnown RBP2.77□□□□□ -1.97
GRIA3-207ENST00000620443 KRTAP10-5P60370 271 aa2.75□□□□□ -1.97
GRIA3-207ENST00000620443 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
GRIA3-207ENST00000620443 DNAH9Q9NYC9 4486 aa2.74□□□□□ -1.97
GRIA3-207ENST00000620443 ALMS1Q8TCU4 4167 aa2.72□□□□□ -1.97
GRIA3-207ENST00000620443 VPS13DQ5THJ4 4388 aa2.72□□□□□ -1.97
GRIA3-207ENST00000620443 FAT2Q9NYQ8 4349 aa2.71□□□□□ -1.98
GRIA3-207ENST00000620443 HECTD4Q9Y4D8 3996 aa2.7□□□□□ -1.98
GRIA3-207ENST00000620443 DNAH6Q9C0G6 4158 aa2.67□□□□□ -1.98
GRIA3-207ENST00000620443 DNAH2Q9P225 4427 aa2.67□□□□□ -1.98
GRIA3-207ENST00000620443 PKD1P98161 4303 aa2.66□□□□□ -1.98
GRIA3-207ENST00000620443 HYDINQ4G0P3 5121 aa2.65□□□□□ -1.99
GRIA3-207ENST00000620443 VPS13BQ7Z7G8 4022 aa2.64□□□□□ -1.99
GRIA3-207ENST00000620443 KMT2AQ03164 3969 aa2.64□□□□□ -1.99
GRIA3-207ENST00000620443 DNAH10Q8IVF4 4471 aa2.63□□□□□ -1.99
GRIA3-207ENST00000620443 LORP23490 312 aaPredicted RBP2.63□□□□□ -1.99
GRIA3-207ENST00000620443 MT1HL1P0DM35 61 aa2.6□□□□□ -1.99
GRIA3-207ENST00000620443 STARD9Q9P2P6 4700 aa2.6□□□□□ -1.99
GRIA3-207ENST00000620443 LOC100996750A0A140TA64 210 aa2.58□□□□□ -2
GRIA3-207ENST00000620443 KRTAP4-6Q9BYQ5 205 aa2.58□□□□□ -2
GRIA3-207ENST00000620443 HUWE1Q7Z6Z7 4374 aaKnown RBP2.56□□□□□ -2
GRIA3-207ENST00000620443 PKHD1P08F94 4074 aa2.56□□□□□ -2
GRIA3-207ENST00000620443 KMT2CQ8NEZ4 4911 aaKnown RBP2.56□□□□□ -2
GRIA3-207ENST00000620443 RYR3Q15413 4870 aa2.55□□□□□ -2
GRIA3-207ENST00000620443 DNAH11Q96DT5 4516 aa2.55□□□□□ -2
GRIA3-207ENST00000620443 FAT3Q8TDW7 4589 aa2.53□□□□□ -2
GRIA3-207ENST00000620443 PLECQ15149 4684 aaKnown RBP2.53□□□□□ -2
GRIA3-207ENST00000620443 PKHD1L1Q86WI1 4243 aa2.52□□□□□ -2.01
GRIA3-207ENST00000620443 KRTAP19-4Q3LI73 84 aa2.5□□□□□ -2.01
GRIA3-207ENST00000620443 DNAH8Q96JB1 4490 aa2.5□□□□□ -2.01
GRIA3-207ENST00000620443 DNAH17Q9UFH2 4485 aa2.5□□□□□ -2.01
GRIA3-207ENST00000620443 SACSQ9NZJ4 4579 aa2.49□□□□□ -2.01
GRIA3-207ENST00000620443 KRTAP8-1Q8IUC2 63 aa2.47□□□□□ -2.01
GRIA3-207ENST00000620443 LCE2BO14633 110 aa2.47□□□□□ -2.01
GRIA3-207ENST00000620443 KRTAP10-4P60372 401 aaPredicted RBP2.47□□□□□ -2.01
GRIA3-207ENST00000620443 DNAH5Q8TE73 4624 aa2.47□□□□□ -2.01
GRIA3-207ENST00000620443 RYR2Q92736 4967 aa2.44□□□□□ -2.02
GRIA3-207ENST00000620443 MYCBP2O75592 4640 aa2.43□□□□□ -2.02
GRIA3-207ENST00000620443 LCE3CQ5T5A8 94 aa2.4□□□□□ -2.02
GRIA3-207ENST00000620443 LCE2AQ5TA79 106 aaPredicted RBP2.39□□□□□ -2.03
GRIA3-207ENST00000620443 KRTAP4-5Q9BYR2 181 aa2.38□□□□□ -2.03
GRIA3-207ENST00000620443 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
GRIA3-207ENST00000620443 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
GRIA3-207ENST00000620443 FAT1Q14517 4588 aa2.37□□□□□ -2.03
GRIA3-207ENST00000620443 EPPK1P58107 5090 aaKnown RBP2.37□□□□□ -2.03
GRIA3-207ENST00000620443 LCE2CQ5TA81 110 aa2.36□□□□□ -2.03
GRIA3-207ENST00000620443 HSPG2P98160 4391 aa2.33□□□□□ -2.04
GRIA3-207ENST00000620443 KRTAP10-7P60409 375 aaPredicted RBP2.32□□□□□ -2.04
GRIA3-207ENST00000620443 TNXBP22105 4242 aa2.32□□□□□ -2.04
GRIA3-207ENST00000620443 SPRR2GQ9BYE4 73 aa2.31□□□□□ -2.04
GRIA3-207ENST00000620443 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
GRIA3-207ENST00000620443 BIRC6Q9NR09 4857 aa2.29□□□□□ -2.04
GRIA3-207ENST00000620443 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
GRIA3-207ENST00000620443 LCE3BQ5TA77 95 aa2.29□□□□□ -2.04
GRIA3-207ENST00000620443 MT1HP80294 61 aa2.29□□□□□ -2.04
GRIA3-207ENST00000620443 ABCA13Q86UQ4 5058 aa2.28□□□□□ -2.04
GRIA3-207ENST00000620443 KRTAP4-1Q9BYQ7 146 aa2.28□□□□□ -2.05
GRIA3-207ENST00000620443 MT2AP02795 61 aa2.27□□□□□ -2.05
GRIA3-207ENST00000620443 SPRR5A0A1B0GTR4 108 aa2.27□□□□□ -2.05
GRIA3-207ENST00000620443 PCLOQ9Y6V0 5065 aa2.26□□□□□ -2.05
GRIA3-207ENST00000620443 LRP1BQ9NZR2 4599 aa2.26□□□□□ -2.05
GRIA3-207ENST00000620443 LPAP08519 4548 aa2.25□□□□□ -2.05
GRIA3-207ENST00000620443 SPRR2FQ96RM1 72 aa2.25□□□□□ -2.05
GRIA3-207ENST00000620443 HERC1Q15751 4861 aa2.24□□□□□ -2.05
GRIA3-207ENST00000620443 MT1FP04733 61 aa2.22□□□□□ -2.05
GRIA3-207ENST00000620443 DYNC1H1Q14204 4646 aaKnown RBP2.22□□□□□ -2.05
GRIA3-207ENST00000620443 RYR1P21817 5038 aa2.21□□□□□ -2.06
GRIA3-207ENST00000620443 LCE3DQ9BYE3 92 aa2.21□□□□□ -2.06
GRIA3-207ENST00000620443 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
GRIA3-207ENST00000620443 HERC2O95714 4834 aa2.19□□□□□ -2.06
GRIA3-207ENST00000620443 MT1GP13640 62 aa2.18□□□□□ -2.06
GRIA3-207ENST00000620443 SPRR2EP22531 72 aa2.17□□□□□ -2.06
GRIA3-207ENST00000620443 SPRR2BP35325 72 aa2.17□□□□□ -2.06
GRIA3-207ENST00000620443 SPRR2AP35326 72 aa2.17□□□□□ -2.06
GRIA3-207ENST00000620443 SPRR2DP22532 72 aa2.14□□□□□ -2.07
GRIA3-207ENST00000620443 KRTAP19-8Q3LI54 63 aa2.13□□□□□ -2.07
GRIA3-207ENST00000620443 LRP1Q07954 4544 aaKnown RBP2.12□□□□□ -2.07
GRIA3-207ENST00000620443 KRTAP19-1Q8IUB9 90 aa2.12□□□□□ -2.07
GRIA3-207ENST00000620443 FLGP20930 4061 aaPredicted RBP2.11□□□□□ -2.07
GRIA3-207ENST00000620443 MUC2Q02817 5179 aa2.1□□□□□ -2.07
GRIA3-207ENST00000620443 PRM1P04553 51 aa2.09□□□□□ -2.07
GRIA3-207ENST00000620443 MT1XP80297 61 aa2.09□□□□□ -2.07
GRIA3-207ENST00000620443 KRTAP4-8Q9BYQ9 185 aa2.09□□□□□ -2.08
GRIA3-207ENST00000620443 OBSCNQ5VST9 7968 aa2.07□□□□□ -2.08
GRIA3-207ENST00000620443 KRTAP4-8A0A0G2JLE6 195 aa2.06□□□□□ -2.08
GRIA3-207ENST00000620443 MUC17Q685J3 4493 aa2.05□□□□□ -2.08
GRIA3-207ENST00000620443 KRTAP9-6A0A140TA67 174 aa2.04□□□□□ -2.08
GRIA3-207ENST00000620443 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.03□□□□□ -2.08
GRIA3-207ENST00000620443 KRTAP4-7Q9BYR0 210 aa2.03□□□□□ -2.08
GRIA3-207ENST00000620443 MT1BP07438 61 aa2.02□□□□□ -2.09
GRIA3-207ENST00000620443 KIAA1109Q2LD37 5005 aa2.02□□□□□ -2.09
GRIA3-207ENST00000620443 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms