RNA–Protein interactions for RNA: ENST00000618666.4

CCNT1-205, Transcript of cyclin T1, humanhuman

TSL 2 BASIC

Gene CCNT1, Length 6,915 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-205ENST00000618666 LORP23490 312 aaPredicted RBP2.4□□□□□ -2.03
CCNT1-205ENST00000618666 ANK3Q12955 4377 aaKnown RBP2.4□□□□□ -2.03
CCNT1-205ENST00000618666 DNAH3Q8TD57 4116 aa2.39□□□□□ -2.03
CCNT1-205ENST00000618666 LCE3AQ5TA76 89 aa2.38□□□□□ -2.03
CCNT1-205ENST00000618666 KRTAP17-1Q9BYP8 105 aa2.38□□□□□ -2.03
CCNT1-205ENST00000618666 LCE2DQ5TA82 110 aaPredicted RBP2.33□□□□□ -2.04
CCNT1-205ENST00000618666 KIAA1109Q2LD37 5005 aa2.32□□□□□ -2.04
CCNT1-205ENST00000618666 HYDINQ4G0P3 5121 aa2.3□□□□□ -2.04
CCNT1-205ENST00000618666 DNAH7Q8WXX0 4024 aa2.29□□□□□ -2.04
CCNT1-205ENST00000618666 KRTAP12-3P60328 96 aa2.28□□□□□ -2.04
CCNT1-205ENST00000618666 FRAS1Q86XX4 4008 aa2.28□□□□□ -2.04
CCNT1-205ENST00000618666 ALMS1Q8TCU4 4167 aa2.27□□□□□ -2.05
CCNT1-205ENST00000618666 KRTAP10-12P60413 245 aa2.26□□□□□ -2.05
CCNT1-205ENST00000618666 DNAH10Q8IVF4 4471 aa2.25□□□□□ -2.05
CCNT1-205ENST00000618666 PRKDCP78527 4128 aaKnown RBP2.24□□□□□ -2.05
CCNT1-205ENST00000618666 PLECQ15149 4684 aaKnown RBP2.22□□□□□ -2.05
CCNT1-205ENST00000618666 MT1HL1P0DM35 61 aa2.22□□□□□ -2.05
CCNT1-205ENST00000618666 RYR1P21817 5038 aa2.21□□□□□ -2.06
CCNT1-205ENST00000618666 DNAH8Q96JB1 4490 aa2.2□□□□□ -2.06
CCNT1-205ENST00000618666 RYR2Q92736 4967 aa2.19□□□□□ -2.06
CCNT1-205ENST00000618666 BIRC6Q9NR09 4857 aa2.19□□□□□ -2.06
CCNT1-205ENST00000618666 HECTD4Q9Y4D8 3996 aa2.18□□□□□ -2.06
CCNT1-205ENST00000618666 DNAH5Q8TE73 4624 aa2.17□□□□□ -2.06
CCNT1-205ENST00000618666 DYNC2H1Q8NCM8 4307 aaKnown RBP2.17□□□□□ -2.06
CCNT1-205ENST00000618666 RYR3Q15413 4870 aa2.16□□□□□ -2.06
CCNT1-205ENST00000618666 KRTAP10-4P60372 401 aaPredicted RBP2.16□□□□□ -2.06
CCNT1-205ENST00000618666 SYNE1Q8NF91 8797 aaKnown RBP2.16□□□□□ -2.06
CCNT1-205ENST00000618666 DNAH11Q96DT5 4516 aa2.15□□□□□ -2.06
CCNT1-205ENST00000618666 DYNC1H1Q14204 4646 aaKnown RBP2.15□□□□□ -2.07
CCNT1-205ENST00000618666 DNAH1Q9P2D7 4330 aa2.15□□□□□ -2.07
CCNT1-205ENST00000618666 LCE2CQ5TA81 110 aa2.14□□□□□ -2.07
CCNT1-205ENST00000618666 DNAH9Q9NYC9 4486 aa2.13□□□□□ -2.07
CCNT1-205ENST00000618666 HERC2O95714 4834 aa2.12□□□□□ -2.07
CCNT1-205ENST00000618666 DNAH2Q9P225 4427 aa2.12□□□□□ -2.07
CCNT1-205ENST00000618666 FAT1Q14517 4588 aa2.12□□□□□ -2.07
CCNT1-205ENST00000618666 DNAH6Q9C0G6 4158 aa2.12□□□□□ -2.07
CCNT1-205ENST00000618666 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
CCNT1-205ENST00000618666 FAT2Q9NYQ8 4349 aa2.11□□□□□ -2.07
CCNT1-205ENST00000618666 HUWE1Q7Z6Z7 4374 aaKnown RBP2.1□□□□□ -2.07
CCNT1-205ENST00000618666 APOBP04114 4563 aaKnown RBP2.09□□□□□ -2.07
CCNT1-205ENST00000618666 ABCA13Q86UQ4 5058 aa2.09□□□□□ -2.07
CCNT1-205ENST00000618666 PCLOQ9Y6V0 5065 aa2.09□□□□□ -2.08
CCNT1-205ENST00000618666 KMT2CQ8NEZ4 4911 aaKnown RBP2.09□□□□□ -2.08
CCNT1-205ENST00000618666 KRTAP12-4P60329 112 aa2.09□□□□□ -2.08
CCNT1-205ENST00000618666 KRTAP19-4Q3LI73 84 aa2.09□□□□□ -2.08
CCNT1-205ENST00000618666 LCE2BO14633 110 aa2.08□□□□□ -2.08
CCNT1-205ENST00000618666 PKD1P98161 4303 aa2.07□□□□□ -2.08
CCNT1-205ENST00000618666 VPS13BQ7Z7G8 4022 aa2.07□□□□□ -2.08
CCNT1-205ENST00000618666 MYCBP2O75592 4640 aa2.06□□□□□ -2.08
CCNT1-205ENST00000618666 STARD9Q9P2P6 4700 aa2.06□□□□□ -2.08
CCNT1-205ENST00000618666 LCE3BQ5TA77 95 aa2.05□□□□□ -2.08
CCNT1-205ENST00000618666 KRTAP4-5Q9BYR2 181 aa2.05□□□□□ -2.08
CCNT1-205ENST00000618666 DNAH17Q9UFH2 4485 aa2.05□□□□□ -2.08
CCNT1-205ENST00000618666 KMT2AQ03164 3969 aa2.04□□□□□ -2.08
CCNT1-205ENST00000618666 VPS13DQ5THJ4 4388 aa2.04□□□□□ -2.08
CCNT1-205ENST00000618666 LRP1BQ9NZR2 4599 aa2.04□□□□□ -2.08
CCNT1-205ENST00000618666 SACSQ9NZJ4 4579 aa2.04□□□□□ -2.08
CCNT1-205ENST00000618666 EPPK1P58107 5090 aaKnown RBP2.04□□□□□ -2.08
CCNT1-205ENST00000618666 FAT3Q8TDW7 4589 aa2.03□□□□□ -2.08
CCNT1-205ENST00000618666 PKHD1P08F94 4074 aa2.03□□□□□ -2.08
CCNT1-205ENST00000618666 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
CCNT1-205ENST00000618666 PKHD1L1Q86WI1 4243 aa1.99□□□□□ -2.09
CCNT1-205ENST00000618666 HERC1Q15751 4861 aa1.98□□□□□ -2.09
CCNT1-205ENST00000618666 LCE3CQ5T5A8 94 aa1.98□□□□□ -2.09
CCNT1-205ENST00000618666 UBR4Q5T4S7 5183 aa1.98□□□□□ -2.09
CCNT1-205ENST00000618666 SPRR2GQ9BYE4 73 aa1.96□□□□□ -2.1
CCNT1-205ENST00000618666 KRTAP4-1Q9BYQ7 146 aa1.96□□□□□ -2.1
CCNT1-205ENST00000618666 KRTAP4-7Q9BYR0 210 aa1.96□□□□□ -2.1
CCNT1-205ENST00000618666 LCE2AQ5TA79 106 aaPredicted RBP1.96□□□□□ -2.1
CCNT1-205ENST00000618666 KRTAP8-1Q8IUC2 63 aa1.95□□□□□ -2.1
CCNT1-205ENST00000618666 RNF213Q63HN8 5207 aa1.94□□□□□ -2.1
CCNT1-205ENST00000618666 MT1GP13640 62 aa1.93□□□□□ -2.1
CCNT1-205ENST00000618666 DSTQ03001 7570 aaKnown RBP1.92□□□□□ -2.1
CCNT1-205ENST00000618666 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
CCNT1-205ENST00000618666 LRP1Q07954 4544 aaKnown RBP1.92□□□□□ -2.1
CCNT1-205ENST00000618666 PRM1P04553 51 aa1.92□□□□□ -2.1
CCNT1-205ENST00000618666 MT1HP80294 61 aa1.9□□□□□ -2.11
CCNT1-205ENST00000618666 MT2AP02795 61 aa1.89□□□□□ -2.11
CCNT1-205ENST00000618666 LRP2P98164 4655 aa1.88□□□□□ -2.11
CCNT1-205ENST00000618666 KRTAP4-8A0A0G2JLE6 195 aa1.88□□□□□ -2.11
CCNT1-205ENST00000618666 KRTAP4-8Q9BYQ9 185 aa1.88□□□□□ -2.11
CCNT1-205ENST00000618666 LCE4AQ5TA78 99 aa1.87□□□□□ -2.11
CCNT1-205ENST00000618666 KRTAP4-9Q9BYQ8 210 aa1.87□□□□□ -2.11
CCNT1-205ENST00000618666 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CCNT1-205ENST00000618666 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
CCNT1-205ENST00000618666 HSPG2P98160 4391 aa1.86□□□□□ -2.11
CCNT1-205ENST00000618666 LPAP08519 4548 aa1.85□□□□□ -2.11
CCNT1-205ENST00000618666 KRTAP19-8Q3LI54 63 aa1.85□□□□□ -2.11
CCNT1-205ENST00000618666 SPRR5A0A1B0GTR4 108 aa1.84□□□□□ -2.11
CCNT1-205ENST00000618666 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
CCNT1-205ENST00000618666 LOC100996750A0A140TA64 210 aa1.84□□□□□ -2.12
CCNT1-205ENST00000618666 MT1FP04733 61 aa1.81□□□□□ -2.12
CCNT1-205ENST00000618666 SPRR2FQ96RM1 72 aa1.81□□□□□ -2.12
CCNT1-205ENST00000618666 FAT4Q6V0I7 4981 aa1.8□□□□□ -2.12
CCNT1-205ENST00000618666 KRTAP9-9Q9BYP9 154 aa1.77□□□□□ -2.13
CCNT1-205ENST00000618666 KRTAP9-4Q9BYQ2 154 aa1.77□□□□□ -2.13
CCNT1-205ENST00000618666 TNXBP22105 4242 aa1.77□□□□□ -2.13
CCNT1-205ENST00000618666 SYNE2Q8WXH0 6885 aaKnown RBP1.77□□□□□ -2.13
CCNT1-205ENST00000618666 KRTAP4-3Q9BYR4 195 aa1.76□□□□□ -2.13
CCNT1-205ENST00000618666 KRTAP19-1Q8IUB9 90 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms