RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 DNAH12Q6ZR08 3092 aa0.02□□□□□ -2.41
RFC3-203ENST00000616236 SPRR2EP22531 72 aa0.02□□□□□ -2.41
RFC3-203ENST00000616236 LINC00308Q8TCZ7 52 aa0.02□□□□□ -2.41
RFC3-203ENST00000616236 CFAP47Q6ZTR5 3102 aa0.02□□□□□ -2.41
RFC3-203ENST00000616236 C5orf42Q9H799 3197 aa0.01□□□□□ -2.41
RFC3-203ENST00000616236 MYO15AQ9UKN7 3530 aa0.01□□□□□ -2.41
RFC3-203ENST00000616236 LRBAP50851 2863 aa0□□□□□ -2.41
RFC3-203ENST00000616236 EYSQ5T1H1 3165 aa0□□□□□ -2.41
RFC3-203ENST00000616236 SRRM2Q9UQ35 2752 aaKnown RBP-0□□□□□ -2.41
RFC3-203ENST00000616236 MTORP42345 2549 aa-0.01□□□□□ -2.41
RFC3-203ENST00000616236 STARD9Q9P2P6 4700 aa-0.01□□□□□ -2.41
RFC3-203ENST00000616236 LAMA5O15230 3695 aa-0.01□□□□□ -2.41
RFC3-203ENST00000616236 CUBNO60494 3623 aa-0.01□□□□□ -2.41
RFC3-203ENST00000616236 EFCAB6Q5THR3 1501 aa-0.01□□□□□ -2.41
RFC3-203ENST00000616236 SPTAN1Q13813 2472 aaKnown RBP-0.01□□□□□ -2.41
RFC3-203ENST00000616236 RANBP2P49792 3224 aaKnown RBP-0.01□□□□□ -2.41
RFC3-203ENST00000616236 AKAP9Q99996 3911 aa-0.02□□□□□ -2.41
RFC3-203ENST00000616236 H0YGX0 51 aa-0.02□□□□□ -2.41
RFC3-203ENST00000616236 CEP250Q9BV73 2442 aa-0.02□□□□□ -2.41
RFC3-203ENST00000616236 MUC3AQ02505 3323 aa-0.02□□□□□ -2.41
RFC3-203ENST00000616236 ADCY10Q96PN6 1610 aa-0.02□□□□□ -2.41
RFC3-203ENST00000616236 TACC2O95359 2948 aa-0.03□□□□□ -2.41
RFC3-203ENST00000616236 NBPF19A0A087WUL8 3843 aa-0.03□□□□□ -2.41
RFC3-203ENST00000616236 RELNP78509 3460 aa-0.03□□□□□ -2.41
RFC3-203ENST00000616236 CRYBG3Q68DQ2 2970 aa-0.03□□□□□ -2.41
RFC3-203ENST00000616236 PKHD1L1Q86WI1 4243 aa-0.04□□□□□ -2.42
RFC3-203ENST00000616236 DNAH9Q9NYC9 4486 aa-0.04□□□□□ -2.42
RFC3-203ENST00000616236 LOC400499M0QZD8 3231 aa-0.04□□□□□ -2.42
RFC3-203ENST00000616236 FREM2Q5SZK8 3169 aa-0.05□□□□□ -2.42
RFC3-203ENST00000616236 NIPBLQ6KC79 2804 aaeCLIP-0.05□□□□□ -2.42
RFC3-203ENST00000616236 IGLV5-48A0A075B6I7 105 aa-0.05□□□□□ -2.42
RFC3-203ENST00000616236 DNAH3Q8TD57 4116 aa-0.05□□□□□ -2.42
RFC3-203ENST00000616236 DMXL2Q8TDJ6 3036 aa-0.05□□□□□ -2.42
RFC3-203ENST00000616236 DYNC1H1Q14204 4646 aaKnown RBP-0.07□□□□□ -2.42
RFC3-203ENST00000616236 FANCD2Q9BXW9 1451 aa-0.07□□□□□ -2.42
RFC3-203ENST00000616236 SACSQ9NZJ4 4579 aa-0.07□□□□□ -2.42
RFC3-203ENST00000616236 PLNP26678 52 aa-0.07□□□□□ -2.42
RFC3-203ENST00000616236 NRXN3Q9Y4C0 1643 aa-0.07□□□□□ -2.42
RFC3-203ENST00000616236 BRCA2P51587 3418 aa-0.07□□□□□ -2.42
RFC3-203ENST00000616236 MGAQ8IWI9 3026 aa-0.07□□□□□ -2.42
RFC3-203ENST00000616236 HTTP42858 3142 aa-0.07□□□□□ -2.42
RFC3-203ENST00000616236 LMO7Q8WWI1 1683 aa-0.08□□□□□ -2.42
RFC3-203ENST00000616236 ASPMQ8IZT6 3477 aa-0.08□□□□□ -2.42
RFC3-203ENST00000616236 ABCA5Q8WWZ7 1642 aa-0.08□□□□□ -2.42
RFC3-203ENST00000616236 ADGRG4Q8IZF6 3080 aa-0.08□□□□□ -2.42
RFC3-203ENST00000616236 FAT1Q14517 4588 aa-0.09□□□□□ -2.42
RFC3-203ENST00000616236 KRTAP20-2Q3LI61 65 aa-0.09□□□□□ -2.42
RFC3-203ENST00000616236 KRTAP6-1Q3LI64 71 aa-0.09□□□□□ -2.42
RFC3-203ENST00000616236 NOP10Q9NPE3 64 aaKnown RBP-0.09□□□□□ -2.42
RFC3-203ENST00000616236 ABRACLQ9P1F3 81 aa-0.09□□□□□ -2.42
RFC3-203ENST00000616236 ANK3Q12955 4377 aaKnown RBP-0.09□□□□□ -2.42
RFC3-203ENST00000616236 CSMD2Q7Z408 3487 aa-0.1□□□□□ -2.42
RFC3-203ENST00000616236 ABCC8Q09428 1581 aa-0.1□□□□□ -2.42
RFC3-203ENST00000616236 CENPFP49454 3210 aa-0.11□□□□□ -2.43
RFC3-203ENST00000616236 MT1AP04731 61 aa-0.12□□□□□ -2.43
RFC3-203ENST00000616236 KAAG1Q9UBP8 84 aa-0.12□□□□□ -2.43
RFC3-203ENST00000616236 VPS13CQ709C8 3753 aa-0.12□□□□□ -2.43
RFC3-203ENST00000616236 USP34Q70CQ2 3546 aa-0.13□□□□□ -2.43
RFC3-203ENST00000616236 CFAP54Q96N23 3096 aa-0.13□□□□□ -2.43
RFC3-203ENST00000616236 DNAH7Q8WXX0 4024 aa-0.13□□□□□ -2.43
RFC3-203ENST00000616236 SMIM27A0A1W2PRY6 76 aa-0.13□□□□□ -2.43
RFC3-203ENST00000616236 WDFY3Q8IZQ1 3526 aa-0.13□□□□□ -2.43
RFC3-203ENST00000616236 FAM208AQ9UK61 1670 aaKnown RBP-0.14□□□□□ -2.43
RFC3-203ENST00000616236 SPRR2FQ96RM1 72 aa-0.14□□□□□ -2.43
RFC3-203ENST00000616236 CMC2Q9NRP2 79 aa-0.14□□□□□ -2.43
RFC3-203ENST00000616236 CENPEQ02224 2701 aa-0.14□□□□□ -2.43
RFC3-203ENST00000616236 KIF21BO75037 1637 aa-0.14□□□□□ -2.43
RFC3-203ENST00000616236 DEFB110Q30KQ9 67 aa-0.15□□□□□ -2.43
RFC3-203ENST00000616236 CHD7Q9P2D1 2997 aa-0.15□□□□□ -2.43
RFC3-203ENST00000616236 FRYLO94915 3013 aa-0.16□□□□□ -2.43
RFC3-203ENST00000616236 UTRNP46939 3433 aa-0.16□□□□□ -2.43
RFC3-203ENST00000616236 DNAH6Q9C0G6 4158 aa-0.16□□□□□ -2.44
RFC3-203ENST00000616236 DNAH1Q9P2D7 4330 aa-0.16□□□□□ -2.44
RFC3-203ENST00000616236 APOBP04114 4563 aaKnown RBP-0.17□□□□□ -2.44
RFC3-203ENST00000616236 WFDC10BQ8IUB3 73 aa-0.17□□□□□ -2.44
RFC3-203ENST00000616236 DDX60Q8IY21 1712 aaKnown RBP-0.17□□□□□ -2.44
RFC3-203ENST00000616236 ACACAQ13085 2346 aa-0.18□□□□□ -2.44
RFC3-203ENST00000616236 DNAH14Q0VDD8 3507 aa-0.18□□□□□ -2.44
RFC3-203ENST00000616236 MMP24-AS1A0A0U1RRL7 71 aa-0.18□□□□□ -2.44
RFC3-203ENST00000616236 IQGAP1P46940 1657 aa-0.18□□□□□ -2.44
RFC3-203ENST00000616236 FRYQ5TBA9 3013 aa-0.19□□□□□ -2.44
RFC3-203ENST00000616236 SMR3BP02814 79 aaPredicted RBP-0.19□□□□□ -2.44
RFC3-203ENST00000616236 DNAH2Q9P225 4427 aa-0.19□□□□□ -2.44
RFC3-203ENST00000616236 TRIOO75962 3097 aa-0.19□□□□□ -2.44
RFC3-203ENST00000616236 SPENQ96T58 3664 aaKnown RBP-0.2□□□□□ -2.44
RFC3-203ENST00000616236 DNAH5Q8TE73 4624 aa-0.21□□□□□ -2.44
RFC3-203ENST00000616236 KRTAP19-7Q3SYF9 63 aa-0.21□□□□□ -2.44
RFC3-203ENST00000616236 CDH23Q9H251 3354 aa-0.22□□□□□ -2.44
RFC3-203ENST00000616236 ATMQ13315 3056 aa-0.22□□□□□ -2.44
RFC3-203ENST00000616236 TFF3Q07654 80 aa-0.22□□□□□ -2.44
RFC3-203ENST00000616236 SPTBN5Q9NRC6 3674 aaKnown RBP-0.23□□□□□ -2.45
RFC3-203ENST00000616236 PLECQ15149 4684 aaKnown RBP-0.23□□□□□ -2.45
RFC3-203ENST00000616236 PRUNE2Q8WUY3 3088 aa-0.23□□□□□ -2.45
RFC3-203ENST00000616236 VPS13AQ96RL7 3174 aa-0.24□□□□□ -2.45
RFC3-203ENST00000616236 SNRPGP15A8MWD9 76 aa-0.24□□□□□ -2.45
RFC3-203ENST00000616236 M0QY20 66 aa-0.24□□□□□ -2.45
RFC3-203ENST00000616236 TNP1P09430 55 aa-0.25□□□□□ -2.45
RFC3-203ENST00000616236 KRTAP19-8Q3LI54 63 aa-0.25□□□□□ -2.45
RFC3-203ENST00000616236 MUC17Q685J3 4493 aa-0.25□□□□□ -2.45
RFC3-203ENST00000616236 VPS13DQ5THJ4 4388 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms