RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 DNAH11Q96DT5 4516 aa5.57□□□□□ -1.52
TNFAIP3-206ENST00000612899 PLECQ15149 4684 aaKnown RBP5.56□□□□□ -1.52
TNFAIP3-206ENST00000612899 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
TNFAIP3-206ENST00000612899 DNAH1Q9P2D7 4330 aa5.48□□□□□ -1.53
TNFAIP3-206ENST00000612899 LORP23490 312 aaPredicted RBP5.47□□□□□ -1.53
TNFAIP3-206ENST00000612899 KRTAP10-12P60413 245 aa5.45□□□□□ -1.54
TNFAIP3-206ENST00000612899 FAT1Q14517 4588 aa5.44□□□□□ -1.54
TNFAIP3-206ENST00000612899 DNAH10Q8IVF4 4471 aa5.42□□□□□ -1.54
TNFAIP3-206ENST00000612899 PRKDCP78527 4128 aaKnown RBP5.41□□□□□ -1.54
TNFAIP3-206ENST00000612899 ALMS1Q8TCU4 4167 aa5.39□□□□□ -1.55
TNFAIP3-206ENST00000612899 DYNC1H1Q14204 4646 aaKnown RBP5.37□□□□□ -1.55
TNFAIP3-206ENST00000612899 RYR1P21817 5038 aa5.37□□□□□ -1.55
TNFAIP3-206ENST00000612899 DNAH8Q96JB1 4490 aa5.34□□□□□ -1.55
TNFAIP3-206ENST00000612899 STARD9Q9P2P6 4700 aa5.33□□□□□ -1.56
TNFAIP3-206ENST00000612899 VPS13DQ5THJ4 4388 aa5.33□□□□□ -1.56
TNFAIP3-206ENST00000612899 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
TNFAIP3-206ENST00000612899 LRP1BQ9NZR2 4599 aa5.32□□□□□ -1.56
TNFAIP3-206ENST00000612899 KRTAP4-1Q9BYQ7 146 aa5.3□□□□□ -1.56
TNFAIP3-206ENST00000612899 DNAH17Q9UFH2 4485 aa5.3□□□□□ -1.56
TNFAIP3-206ENST00000612899 CRCT1Q9UGL9 99 aa5.3□□□□□ -1.56
TNFAIP3-206ENST00000612899 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
TNFAIP3-206ENST00000612899 DNAH2Q9P225 4427 aa5.24□□□□□ -1.57
TNFAIP3-206ENST00000612899 SACSQ9NZJ4 4579 aa5.23□□□□□ -1.57
TNFAIP3-206ENST00000612899 ANK2Q01484 3957 aa5.21□□□□□ -1.57
TNFAIP3-206ENST00000612899 KIAA1109Q2LD37 5005 aa5.2□□□□□ -1.58
TNFAIP3-206ENST00000612899 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
TNFAIP3-206ENST00000612899 KMT2AQ03164 3969 aa5.17□□□□□ -1.58
TNFAIP3-206ENST00000612899 LYSTQ99698 3801 aa5.15□□□□□ -1.59
TNFAIP3-206ENST00000612899 MT1HP80294 61 aa5.11□□□□□ -1.59
TNFAIP3-206ENST00000612899 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
TNFAIP3-206ENST00000612899 RYR3Q15413 4870 aa5.09□□□□□ -1.59
TNFAIP3-206ENST00000612899 FAT2Q9NYQ8 4349 aa5.09□□□□□ -1.6
TNFAIP3-206ENST00000612899 VPS13BQ7Z7G8 4022 aa5.08□□□□□ -1.6
TNFAIP3-206ENST00000612899 MT2AP02795 61 aa5.07□□□□□ -1.6
TNFAIP3-206ENST00000612899 DYNC2H1Q8NCM8 4307 aaKnown RBP5.07□□□□□ -1.6
TNFAIP3-206ENST00000612899 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
TNFAIP3-206ENST00000612899 FAT3Q8TDW7 4589 aa5.01□□□□□ -1.61
TNFAIP3-206ENST00000612899 SPRR2GQ9BYE4 73 aa5.01□□□□□ -1.61
TNFAIP3-206ENST00000612899 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
TNFAIP3-206ENST00000612899 CMYA5Q8N3K9 4069 aa4.99□□□□□ -1.61
TNFAIP3-206ENST00000612899 DNAH3Q8TD57 4116 aa4.99□□□□□ -1.61
TNFAIP3-206ENST00000612899 MT1FP04733 61 aa4.98□□□□□ -1.61
TNFAIP3-206ENST00000612899 LRP1Q07954 4544 aaKnown RBP4.98□□□□□ -1.61
TNFAIP3-206ENST00000612899 HYDINQ4G0P3 5121 aa4.96□□□□□ -1.61
TNFAIP3-206ENST00000612899 RYR2Q92736 4967 aa4.89□□□□□ -1.63
TNFAIP3-206ENST00000612899 KMT2CQ8NEZ4 4911 aaKnown RBP4.89□□□□□ -1.63
TNFAIP3-206ENST00000612899 DNAH7Q8WXX0 4024 aa4.89□□□□□ -1.63
TNFAIP3-206ENST00000612899 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
TNFAIP3-206ENST00000612899 DNAH6Q9C0G6 4158 aa4.87□□□□□ -1.63
TNFAIP3-206ENST00000612899 HERC2O95714 4834 aa4.86□□□□□ -1.63
TNFAIP3-206ENST00000612899 LRP2P98164 4655 aa4.82□□□□□ -1.64
TNFAIP3-206ENST00000612899 PKHD1P08F94 4074 aa4.81□□□□□ -1.64
TNFAIP3-206ENST00000612899 FRAS1Q86XX4 4008 aa4.81□□□□□ -1.64
TNFAIP3-206ENST00000612899 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
TNFAIP3-206ENST00000612899 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
TNFAIP3-206ENST00000612899 KRTAP19-1Q8IUB9 90 aa4.76□□□□□ -1.65
TNFAIP3-206ENST00000612899 BIRC6Q9NR09 4857 aa4.72□□□□□ -1.65
TNFAIP3-206ENST00000612899 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
TNFAIP3-206ENST00000612899 HECTD4Q9Y4D8 3996 aa4.71□□□□□ -1.66
TNFAIP3-206ENST00000612899 PCLOQ9Y6V0 5065 aa4.67□□□□□ -1.66
TNFAIP3-206ENST00000612899 KRTAP19-8Q3LI54 63 aa4.67□□□□□ -1.66
TNFAIP3-206ENST00000612899 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
TNFAIP3-206ENST00000612899 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
TNFAIP3-206ENST00000612899 HSPG2P98160 4391 aa4.66□□□□□ -1.66
TNFAIP3-206ENST00000612899 LCE3CQ5T5A8 94 aa4.65□□□□□ -1.66
TNFAIP3-206ENST00000612899 MT1XP80297 61 aa4.58□□□□□ -1.68
TNFAIP3-206ENST00000612899 KRTAP9-8Q9BYQ0 159 aa4.58□□□□□ -1.68
TNFAIP3-206ENST00000612899 PKD1P98161 4303 aa4.57□□□□□ -1.68
TNFAIP3-206ENST00000612899 MT1BP07438 61 aa4.57□□□□□ -1.68
TNFAIP3-206ENST00000612899 LCE2CQ5TA81 110 aa4.54□□□□□ -1.68
TNFAIP3-206ENST00000612899 HERC1Q15751 4861 aa4.54□□□□□ -1.68
TNFAIP3-206ENST00000612899 ABCA13Q86UQ4 5058 aa4.53□□□□□ -1.68
TNFAIP3-206ENST00000612899 LPAP08519 4548 aa4.49□□□□□ -1.69
TNFAIP3-206ENST00000612899 KRTAP4-8A0A0G2JLE6 195 aa4.46□□□□□ -1.69
TNFAIP3-206ENST00000612899 KRTAP4-8Q9BYQ9 185 aa4.46□□□□□ -1.69
TNFAIP3-206ENST00000612899 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
TNFAIP3-206ENST00000612899 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
TNFAIP3-206ENST00000612899 SYNE1Q8NF91 8797 aaKnown RBP4.44□□□□□ -1.7
TNFAIP3-206ENST00000612899 KRTAP19-2Q3LHN2 52 aa4.37□□□□□ -1.71
TNFAIP3-206ENST00000612899 MT1GP13640 62 aa4.34□□□□□ -1.71
TNFAIP3-206ENST00000612899 SPRR2EP22531 72 aa4.34□□□□□ -1.71
TNFAIP3-206ENST00000612899 SPRR2BP35325 72 aa4.34□□□□□ -1.71
TNFAIP3-206ENST00000612899 SPRR2AP35326 72 aa4.34□□□□□ -1.71
TNFAIP3-206ENST00000612899 MUC17Q685J3 4493 aa4.34□□□□□ -1.72
TNFAIP3-206ENST00000612899 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
TNFAIP3-206ENST00000612899 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
TNFAIP3-206ENST00000612899 UBR4Q5T4S7 5183 aa4.3□□□□□ -1.72
TNFAIP3-206ENST00000612899 LCE2BO14633 110 aa4.28□□□□□ -1.72
TNFAIP3-206ENST00000612899 RNF213Q63HN8 5207 aa4.28□□□□□ -1.72
TNFAIP3-206ENST00000612899 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
TNFAIP3-206ENST00000612899 KRTAP12-4P60329 112 aa4.25□□□□□ -1.73
TNFAIP3-206ENST00000612899 TNXBP22105 4242 aa4.25□□□□□ -1.73
TNFAIP3-206ENST00000612899 FLGP20930 4061 aaPredicted RBP4.23□□□□□ -1.73
TNFAIP3-206ENST00000612899 KRTAP4-7Q9BYR0 210 aa4.2□□□□□ -1.74
TNFAIP3-206ENST00000612899 MUC2Q02817 5179 aa4.19□□□□□ -1.74
TNFAIP3-206ENST00000612899 SPRR2DP22532 72 aa4.18□□□□□ -1.74
TNFAIP3-206ENST00000612899 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
TNFAIP3-206ENST00000612899 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
TNFAIP3-206ENST00000612899 MT1LQ93083 61 aa4.13□□□□□ -1.75
TNFAIP3-206ENST00000612899 MT1EP04732 61 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms