RNA–Protein interactions for RNA: ENST00000609318.5

LARP4B-210, Transcript of La ribonucleoprotein domain family member 4B, humanhuman

TSL 1 (best)

Gene LARP4B, Length 4,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4B-210ENST00000609318 DNAH11Q96DT5 4516 aa5.08□□□□□ -1.6
LARP4B-210ENST00000609318 DNAH17Q9UFH2 4485 aa5.05□□□□□ -1.6
LARP4B-210ENST00000609318 PRKDCP78527 4128 aaKnown RBP5.05□□□□□ -1.6
LARP4B-210ENST00000609318 DNAH3Q8TD57 4116 aa5.02□□□□□ -1.61
LARP4B-210ENST00000609318 KRTAP13-4Q3LI77 160 aa5.02□□□□□ -1.61
LARP4B-210ENST00000609318 KRTAP4-5Q9BYR2 181 aa4.99□□□□□ -1.61
LARP4B-210ENST00000609318 KRTAP15-1Q3LI76 137 aa4.99□□□□□ -1.61
LARP4B-210ENST00000609318 CMYA5Q8N3K9 4069 aa4.95□□□□□ -1.62
LARP4B-210ENST00000609318 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
LARP4B-210ENST00000609318 DNAH2Q9P225 4427 aa4.94□□□□□ -1.62
LARP4B-210ENST00000609318 LRP1BQ9NZR2 4599 aa4.91□□□□□ -1.62
LARP4B-210ENST00000609318 KRTAP10-6P60371 365 aaPredicted RBP4.9□□□□□ -1.62
LARP4B-210ENST00000609318 KMT2AQ03164 3969 aa4.89□□□□□ -1.63
LARP4B-210ENST00000609318 FAT1Q14517 4588 aa4.89□□□□□ -1.63
LARP4B-210ENST00000609318 DYNC2H1Q8NCM8 4307 aaKnown RBP4.87□□□□□ -1.63
LARP4B-210ENST00000609318 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
LARP4B-210ENST00000609318 KRTAP3-3Q9BYR6 98 aa4.86□□□□□ -1.63
LARP4B-210ENST00000609318 INE1O15225 51 aa4.85□□□□□ -1.63
LARP4B-210ENST00000609318 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
LARP4B-210ENST00000609318 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
LARP4B-210ENST00000609318 FAT2Q9NYQ8 4349 aa4.79□□□□□ -1.64
LARP4B-210ENST00000609318 SACSQ9NZJ4 4579 aa4.76□□□□□ -1.65
LARP4B-210ENST00000609318 LYSTQ99698 3801 aa4.75□□□□□ -1.65
LARP4B-210ENST00000609318 CRCT1Q9UGL9 99 aa4.75□□□□□ -1.65
LARP4B-210ENST00000609318 RYR1P21817 5038 aa4.72□□□□□ -1.65
LARP4B-210ENST00000609318 DNAH6Q9C0G6 4158 aa4.72□□□□□ -1.65
LARP4B-210ENST00000609318 DNAH7Q8WXX0 4024 aa4.72□□□□□ -1.65
LARP4B-210ENST00000609318 VPS13BQ7Z7G8 4022 aa4.71□□□□□ -1.66
LARP4B-210ENST00000609318 KIAA1109Q2LD37 5005 aa4.71□□□□□ -1.66
LARP4B-210ENST00000609318 HECTD4Q9Y4D8 3996 aa4.69□□□□□ -1.66
LARP4B-210ENST00000609318 RYR3Q15413 4870 aa4.65□□□□□ -1.66
LARP4B-210ENST00000609318 HYDINQ4G0P3 5121 aa4.64□□□□□ -1.67
LARP4B-210ENST00000609318 APOBP04114 4563 aaKnown RBP4.64□□□□□ -1.67
LARP4B-210ENST00000609318 RYR2Q92736 4967 aa4.64□□□□□ -1.67
LARP4B-210ENST00000609318 KRTAP17-1Q9BYP8 105 aa4.62□□□□□ -1.67
LARP4B-210ENST00000609318 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
LARP4B-210ENST00000609318 FRAS1Q86XX4 4008 aa4.6□□□□□ -1.67
LARP4B-210ENST00000609318 KRTAP4-1Q9BYQ7 146 aa4.59□□□□□ -1.67
LARP4B-210ENST00000609318 LRP1Q07954 4544 aaKnown RBP4.56□□□□□ -1.68
LARP4B-210ENST00000609318 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
LARP4B-210ENST00000609318 LORP23490 312 aaPredicted RBP4.53□□□□□ -1.68
LARP4B-210ENST00000609318 PKHD1P08F94 4074 aa4.52□□□□□ -1.69
LARP4B-210ENST00000609318 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
LARP4B-210ENST00000609318 PKD1P98161 4303 aa4.48□□□□□ -1.69
LARP4B-210ENST00000609318 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
LARP4B-210ENST00000609318 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
LARP4B-210ENST00000609318 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
LARP4B-210ENST00000609318 HSPG2P98160 4391 aa4.43□□□□□ -1.7
LARP4B-210ENST00000609318 HERC2O95714 4834 aa4.41□□□□□ -1.7
LARP4B-210ENST00000609318 MT1HP80294 61 aa4.38□□□□□ -1.71
LARP4B-210ENST00000609318 KRTAP23-1A1A580 65 aa4.35□□□□□ -1.71
LARP4B-210ENST00000609318 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.71
LARP4B-210ENST00000609318 LRP2P98164 4655 aa4.32□□□□□ -1.72
LARP4B-210ENST00000609318 MT2AP02795 61 aa4.3□□□□□ -1.72
LARP4B-210ENST00000609318 LCE3AQ5TA76 89 aa4.29□□□□□ -1.72
LARP4B-210ENST00000609318 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
LARP4B-210ENST00000609318 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
LARP4B-210ENST00000609318 MT1FP04733 61 aa4.24□□□□□ -1.73
LARP4B-210ENST00000609318 EPPK1P58107 5090 aaKnown RBP4.23□□□□□ -1.73
LARP4B-210ENST00000609318 PKHD1L1Q86WI1 4243 aa4.21□□□□□ -1.73
LARP4B-210ENST00000609318 TNXBP22105 4242 aa4.2□□□□□ -1.74
LARP4B-210ENST00000609318 HERC1Q15751 4861 aa4.16□□□□□ -1.74
LARP4B-210ENST00000609318 LPAP08519 4548 aa4.16□□□□□ -1.74
LARP4B-210ENST00000609318 ABCA13Q86UQ4 5058 aa4.15□□□□□ -1.75
LARP4B-210ENST00000609318 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
LARP4B-210ENST00000609318 LCE2CQ5TA81 110 aa4.12□□□□□ -1.75
LARP4B-210ENST00000609318 KRTAP19-1Q8IUB9 90 aa4.12□□□□□ -1.75
LARP4B-210ENST00000609318 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
LARP4B-210ENST00000609318 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
LARP4B-210ENST00000609318 KRTAP19-8Q3LI54 63 aa4.06□□□□□ -1.76
LARP4B-210ENST00000609318 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
LARP4B-210ENST00000609318 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
LARP4B-210ENST00000609318 MUC17Q685J3 4493 aa3.97□□□□□ -1.77
LARP4B-210ENST00000609318 MT1BP07438 61 aa3.95□□□□□ -1.78
LARP4B-210ENST00000609318 SPRR2FQ96RM1 72 aa3.94□□□□□ -1.78
LARP4B-210ENST00000609318 FLGP20930 4061 aaPredicted RBP3.92□□□□□ -1.78
LARP4B-210ENST00000609318 KRTAP9-3Q9BYQ3 159 aa3.92□□□□□ -1.78
LARP4B-210ENST00000609318 MT1XP80297 61 aa3.91□□□□□ -1.78
LARP4B-210ENST00000609318 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
LARP4B-210ENST00000609318 KRTAP19-4Q3LI73 84 aa3.86□□□□□ -1.79
LARP4B-210ENST00000609318 RNF213Q63HN8 5207 aa3.84□□□□□ -1.79
LARP4B-210ENST00000609318 HMCN2Q8NDA2 5059 aa3.83□□□□□ -1.8
LARP4B-210ENST00000609318 FAT4Q6V0I7 4981 aa3.81□□□□□ -1.8
LARP4B-210ENST00000609318 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
LARP4B-210ENST00000609318 LCE2BO14633 110 aa3.76□□□□□ -1.81
LARP4B-210ENST00000609318 MUC2Q02817 5179 aa3.73□□□□□ -1.81
LARP4B-210ENST00000609318 KRTAP9-2Q9BYQ4 174 aa3.72□□□□□ -1.81
LARP4B-210ENST00000609318 UBR4Q5T4S7 5183 aa3.72□□□□□ -1.81
LARP4B-210ENST00000609318 KRTAP4-8A0A0G2JLE6 195 aa3.69□□□□□ -1.82
LARP4B-210ENST00000609318 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
LARP4B-210ENST00000609318 KRTAP4-8Q9BYQ9 185 aa3.69□□□□□ -1.82
LARP4B-210ENST00000609318 LCE2AQ5TA79 106 aaPredicted RBP3.68□□□□□ -1.82
LARP4B-210ENST00000609318 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
LARP4B-210ENST00000609318 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
LARP4B-210ENST00000609318 SPRR5A0A1B0GTR4 108 aa3.63□□□□□ -1.83
LARP4B-210ENST00000609318 SPRR2EP22531 72 aa3.63□□□□□ -1.83
LARP4B-210ENST00000609318 SPRR2BP35325 72 aa3.63□□□□□ -1.83
LARP4B-210ENST00000609318 SPRR2AP35326 72 aa3.63□□□□□ -1.83
LARP4B-210ENST00000609318 LCE3DQ9BYE3 92 aa3.56□□□□□ -1.84
LARP4B-210ENST00000609318 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms